RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 MTMR1Q13613 665 aa10.42□□□□□ -0.74
NUP54-211ENST00000512151 SEC23AQ15436 765 aa10.42□□□□□ -0.74
NUP54-211ENST00000512151 LONRF3Q496Y0 759 aa10.42□□□□□ -0.74
NUP54-211ENST00000512151 SPATA31D4Q6ZUB0 917 aa10.42□□□□□ -0.74
NUP54-211ENST00000512151 SMARCC2Q8TAQ2 1214 aa10.42□□□□□ -0.74
NUP54-211ENST00000512151 LPPQ93052 612 aa10.42□□□□□ -0.74
NUP54-211ENST00000512151 CDHR1Q96JP9 859 aa10.42□□□□□ -0.74
NUP54-211ENST00000512151 TMEM121BQ9BXQ6 578 aaPredicted RBP10.42□□□□□ -0.74
NUP54-211ENST00000512151 EMILIN2Q9BXX0 1053 aa10.42□□□□□ -0.74
NUP54-211ENST00000512151 ADAMTS10Q9H324 1103 aa10.42□□□□□ -0.74
NUP54-211ENST00000512151 SDK1Q7Z5N4 2213 aa10.41□□□□□ -0.74
NUP54-211ENST00000512151 A0A0U1RQF3 1178 aa10.41□□□□□ -0.74
NUP54-211ENST00000512151 SRRM3A6NNA2 597 aaPredicted RBP10.41□□□□□ -0.74
NUP54-211ENST00000512151 PAPLNO95428 1278 aa10.41□□□□□ -0.74
NUP54-211ENST00000512151 IGHDP01880 384 aa10.41□□□□□ -0.74
NUP54-211ENST00000512151 ATP4AP20648 1035 aa10.41□□□□□ -0.74
NUP54-211ENST00000512151 PRKCQQ04759 706 aa10.41□□□□□ -0.74
NUP54-211ENST00000512151 GRM4Q14833 912 aa10.41□□□□□ -0.74
NUP54-211ENST00000512151 PRR23BQ6ZRT6 265 aa10.41□□□□□ -0.74
NUP54-211ENST00000512151 TAS1R1Q7RTX1 841 aa10.41□□□□□ -0.74
NUP54-211ENST00000512151 ZNF280BQ86YH2 543 aa10.41□□□□□ -0.74
NUP54-211ENST00000512151 MYL10Q9BUA6 226 aa10.41□□□□□ -0.74
NUP54-211ENST00000512151 MRPL9Q9BYD2 267 aaKnown RBP10.41□□□□□ -0.74
NUP54-211ENST00000512151 SENP2Q9HC62 589 aa10.41□□□□□ -0.74
NUP54-211ENST00000512151 JADE2Q9NQC1 790 aa10.41□□□□□ -0.74
NUP54-211ENST00000512151 RXFP3Q9NSD7 469 aa10.41□□□□□ -0.74
NUP54-211ENST00000512151 TBC1D13Q9NVG8 400 aa10.41□□□□□ -0.74
NUP54-211ENST00000512151 RAB23Q9ULC3 237 aa10.41□□□□□ -0.74
NUP54-211ENST00000512151 SALL3Q9BXA9 1300 aa10.41□□□□□ -0.74
NUP54-211ENST00000512151 IGKV6D-21A0A0A0MT36 114 aa10.4□□□□□ -0.74
NUP54-211ENST00000512151 PIK3CDO00329 1044 aa10.4□□□□□ -0.74
NUP54-211ENST00000512151 C2CD2LO14523 706 aa10.4□□□□□ -0.74
NUP54-211ENST00000512151 TEX28O15482 410 aa10.4□□□□□ -0.74
NUP54-211ENST00000512151 HBP1O60381 514 aa10.4□□□□□ -0.74
NUP54-211ENST00000512151 ATG7O95352 703 aa10.4□□□□□ -0.74
NUP54-211ENST00000512151 CCNE2O96020 404 aa10.4□□□□□ -0.74
NUP54-211ENST00000512151 ZSCAN20P17040 1043 aaPredicted RBP10.4□□□□□ -0.74
NUP54-211ENST00000512151 MX1P20591 662 aa10.4□□□□□ -0.74
NUP54-211ENST00000512151 MAGEA9P43362 315 aa10.4□□□□□ -0.74
NUP54-211ENST00000512151 CLCN3P51790 818 aa10.4□□□□□ -0.74
NUP54-211ENST00000512151 SRSF5Q13243 272 aaKnown RBP10.4□□□□□ -0.74
NUP54-211ENST00000512151 ITGB3BPQ13352 177 aaPredicted RBP10.4□□□□□ -0.74
NUP54-211ENST00000512151 AAMPQ13685 434 aa10.4□□□□□ -0.74
NUP54-211ENST00000512151 ZBTB41Q5SVQ8 909 aa10.4□□□□□ -0.74
NUP54-211ENST00000512151 IFIT1BQ5T764 474 aaKnown RBP10.4□□□□□ -0.74
NUP54-211ENST00000512151 CYP26C1Q6V0L0 522 aa10.4□□□□□ -0.74
NUP54-211ENST00000512151 CELF5Q8N6W0 485 aaKnown RBP10.4□□□□□ -0.74
NUP54-211ENST00000512151 TNPO1Q92973 898 aaKnown RBP10.4□□□□□ -0.74
NUP54-211ENST00000512151 NT5C3AQ9H0P0 336 aa10.4□□□□□ -0.74
NUP54-211ENST00000512151 GBP3Q9H0R5 595 aa10.4□□□□□ -0.74
NUP54-211ENST00000512151 FAM217BQ9NTX9 383 aaPredicted RBP10.4□□□□□ -0.74
NUP54-211ENST00000512151 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.4□□□□□ -0.74
NUP54-211ENST00000512151 LHX6Q9UPM6 363 aa10.4□□□□□ -0.74
NUP54-211ENST00000512151 F5P12259 2224 aa10.4□□□□□ -0.74
NUP54-211ENST00000512151 TAF4O00268 1085 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 ZNF213O14771 459 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 HRO43593 1189 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 CSDE1O75534 798 aaKnown RBP10.39□□□□□ -0.75
NUP54-211ENST00000512151 SPINK2P20155 84 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 RPS9P46781 194 aaKnown RBP10.39□□□□□ -0.75
NUP54-211ENST00000512151 NLRP11P59045 1033 aaKnown RBP10.39□□□□□ -0.75
NUP54-211ENST00000512151 TRAF1Q13077 416 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 IL31Q6EBC2 164 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 TPRG1Q6ZUI0 275 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 CYB5R4Q7L1T6 521 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 CCDC60Q8IWA6 550 aaPredicted RBP10.39□□□□□ -0.75
NUP54-211ENST00000512151 ZNF687Q8N1G0 1237 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 DDX1Q92499 740 aaKnown RBP10.39□□□□□ -0.75
NUP54-211ENST00000512151 EVI5LQ96CN4 794 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 FAM126AQ9BYI3 521 aaPredicted RBP10.39□□□□□ -0.75
NUP54-211ENST00000512151 KCNH7Q9NS40 1196 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 WASF3Q9UPY6 502 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 INPP5FQ9Y2H2 1132 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 ASH1LQ9NR48 2969 aaKnown RBP10.39□□□□□ -0.75
NUP54-211ENST00000512151 COL1A2P08123 1366 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 MAST4O15021 2626 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 DDHD2O94830 711 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 KCNK5O95279 499 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 TOP3BO95985 862 aaKnown RBP10.39□□□□□ -0.75
NUP54-211ENST00000512151 EIF4BP23588 611 aaKnown RBP10.39□□□□□ -0.75
NUP54-211ENST00000512151 AFF1P51825 1210 aaKnown RBP10.39□□□□□ -0.75
NUP54-211ENST00000512151 AK2P54819 239 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 NTHL1P78549 312 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 SF3A2Q15428 464 aaKnown RBP10.39□□□□□ -0.75
NUP54-211ENST00000512151 UBE2SQ16763 222 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 NOMO2Q5JPE7 1267 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 ZNF484Q5JVG2 852 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 ABHD15Q6UXT9 468 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 RSPO2Q6UXX9 243 aaPredicted RBP10.39□□□□□ -0.75
NUP54-211ENST00000512151 METTL13Q8N6R0 699 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 LINC01465Q8N7H1 131 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 CUL5Q93034 780 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 RPS6KC1Q96S38 1066 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 KXD1Q9BQD3 176 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 PIDD1Q9HB75 910 aa10.39□□□□□ -0.75
NUP54-211ENST00000512151 MRPL17Q9NRX2 175 aaKnown RBP10.39□□□□□ -0.75
NUP54-211ENST00000512151 MTCL1Q9Y4B5 1905 aaKnown RBP10.38□□□□□ -0.75
NUP54-211ENST00000512151 AKAP13Q12802 2813 aa10.38□□□□□ -0.75
NUP54-211ENST00000512151 NFASCO94856 1347 aa10.38□□□□□ -0.75
NUP54-211ENST00000512151 OFD1O75665 1012 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms