RNA–Protein interactions for RNA: ENST00000512064.5

GYPA-208, Transcript of glycophorin A (MNS blood group), human

TSL 1 (best) BASIC

Gene GYPA, Length 441 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GYPA-208	ENST00000512064	VN1R5	Q7Z5H4	357 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	CAND1	Q86VP6	1230 aa	Known RBP	4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	RHOT2	Q8IXI1	618 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	SYCP3	Q8IZU3	236 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	ARFGAP2	Q8N6H7	521 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	LINC00469	Q8N7U9	141 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	C19orf47	Q8N9M1	422 aa	Known RBP	4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	PPFIBP2	Q8ND30	876 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	PIP4K2C	Q8TBX8	421 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	ENKUR	Q8TC29	256 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	JARID2	Q92833	1246 aa	Predicted RBP	4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	NKD1	Q969G9	470 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	FAM149B1	Q96BN6	582 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	PLD4	Q96BZ4	506 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	STAMBPL1	Q96FJ0	436 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	ACSBG1	Q96GR2	724 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	SHD	Q96IW2	340 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	ANKRD36BP1	Q96IX9	119 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	ARL5B	Q96KC2	179 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	TNIP3	Q96KP6	325 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	GPR101	Q96P66	508 aa	Predicted RBP	4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	HHIP	Q96QV1	700 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	HNRNPAB	Q99729	332 aa	Known RBP	4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	COQ7	Q99807	217 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	GAL3ST1	Q99999	423 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	DESI2	Q9BSY9	194 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	KRTAP4-9	Q9BYQ8	210 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	CSRNP2	Q9H175	543 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	PIF1	Q9H611	641 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	PSTPIP2	Q9H939	334 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	JPH1	Q9HDC5	661 aa	Predicted RBP	4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	TYW1	Q9NV66	732 aa	Known RBP	4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	UBP1	Q9NZI7	540 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	VPS18	Q9P253	973 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	THEG	Q9P2T0	379 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	ORC3	Q9UBD5	711 aa	Predicted RBP	4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	HESX1	Q9UBX0	185 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	GPN3	Q9UHW5	284 aa	Predicted RBP	4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	ZNF215	Q9UL58	517 aa	Predicted RBP	4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	ZNRF3	Q9ULT6	936 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	TLR6	Q9Y2C9	796 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	MSRB2	Q9Y3D2	182 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	COL4A3BP	Q9Y5P4	624 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	USH1C	Q9Y6N9	552 aa		4.4	□□□□□ -1.71
GYPA-208	ENST00000512064	CCDC88B	A6NC98	1476 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064		A0A0B4J203	849 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	FAM177B	A6PVY3	158 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	FADS2P1	A8MWK0	482 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	MCF2L	O15068	1137 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	TBX3	O15119	743 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	KMO	O15229	486 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	EXTL3	O43909	919 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	LILRB5	O75023	590 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	CDC45	O75419	566 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	PAGE1	O75459	146 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	ATE1	O95260	518 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	F13A1	P00488	732 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	LMNA	P02545	664 aa	Known RBP	4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	GHR	P10912	638 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	PC	P11498	1178 aa	Known RBP	4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	EEF2	P13639	858 aa	Known RBP	4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	KRT10	P13645	584 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	CPB1	P15086	417 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	ZKSCAN1	P17029	563 aa	Predicted RBP	4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	PTPN2	P17706	415 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	EIF2AK2	P19525	551 aa	Known RBP	4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	RXRA	P19793	462 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	MX1	P20591	662 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	CTNNA2	P26232	953 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	HSD3B2	P26439	372 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	ARNT	P27540	789 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	CHRNA4	P43681	627 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	ASMT	P46597	345 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	THOP1	P52888	689 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	MTTP	P55157	894 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	UBASH3A	P57075	661 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	EVA1C	P58658	441 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	NLRP12	P59046	1061 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	DSTN	P60981	165 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	CYP4F2	P78329	520 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	KRT83	P78385	493 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	MLLT1	Q03111	559 aa	Predicted RBP	4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	ZBTB16	Q05516	673 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	CYP4F3	Q08477	520 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	MSLN	Q13421	630 aa	Predicted RBP	4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	CYLC2	Q14093	348 aa	Predicted RBP	4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	SQLE	Q14534	574 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	PSMD6	Q15008	389 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	ELF2	Q15723	593 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	BCL2A1	Q16548	175 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	MAP3K11	Q16584	847 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	IFI16	Q16666	785 aa	Known RBP	4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	IMMT	Q16891	758 aa	Known RBP	4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	INSC	Q1MX18	579 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	ANO4	Q32M45	955 aa		4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	PABPC1L	Q4VXU2	614 aa	Known RBP	4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	TDRD12	Q587J7	1177 aa	Known RBP	4.39	□□□□□ -1.71
GYPA-208	ENST00000512064	PRRT3	Q5FWE3	981 aa		4.39	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms