RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 METTL13Q8N6R0 699 aa13.62□□□□□ -0.23
COPS4-210ENST00000511708 FGF14Q92915 247 aa13.62□□□□□ -0.23
COPS4-210ENST00000511708 RRP36Q96EU6 259 aaKnown RBP13.62□□□□□ -0.23
COPS4-210ENST00000511708 AGO4Q9HCK5 861 aaKnown RBP13.62□□□□□ -0.23
COPS4-210ENST00000511708 MRPL17Q9NRX2 175 aaKnown RBP13.62□□□□□ -0.23
COPS4-210ENST00000511708 DACT1Q9NYF0 836 aa13.62□□□□□ -0.23
COPS4-210ENST00000511708 DPP7Q9UHL4 492 aa13.62□□□□□ -0.23
COPS4-210ENST00000511708 GCN1Q92616 2671 aaKnown RBP13.61□□□□□ -0.23
COPS4-210ENST00000511708 GREB1Q4ZG55 1949 aa13.61□□□□□ -0.23
COPS4-210ENST00000511708 SPDYE3A6NKU9 549 aa13.61□□□□□ -0.23
COPS4-210ENST00000511708 BACH1O14867 736 aa13.61□□□□□ -0.23
COPS4-210ENST00000511708 TEX28O15482 410 aa13.61□□□□□ -0.23
COPS4-210ENST00000511708 SSBP05455 408 aaKnown RBP eCLIP13.61□□□□□ -0.23
COPS4-210ENST00000511708 TDGF1P13385 188 aa13.61□□□□□ -0.23
COPS4-210ENST00000511708 DARSP14868 501 aaKnown RBP13.61□□□□□ -0.23
COPS4-210ENST00000511708 PHKA2P46019 1235 aa13.61□□□□□ -0.23
COPS4-210ENST00000511708 RPS9P46781 194 aaKnown RBP13.61□□□□□ -0.23
COPS4-210ENST00000511708 SLC44A4Q53GD3 710 aa13.61□□□□□ -0.23
COPS4-210ENST00000511708 NOMO2Q5JPE7 1267 aa13.61□□□□□ -0.23
COPS4-210ENST00000511708 LAIR1Q6GTX8 287 aa13.61□□□□□ -0.23
COPS4-210ENST00000511708 GET4Q7L5D6 327 aaPredicted RBP13.61□□□□□ -0.23
COPS4-210ENST00000511708 ST13P5Q8NFI4 369 aaPredicted RBP13.61□□□□□ -0.23
COPS4-210ENST00000511708 HDAC7Q8WUI4 952 aa13.61□□□□□ -0.23
COPS4-210ENST00000511708 DDX1Q92499 740 aaKnown RBP13.61□□□□□ -0.23
COPS4-210ENST00000511708 LPPQ93052 612 aa13.61□□□□□ -0.23
COPS4-210ENST00000511708 RPS6KC1Q96S38 1066 aa13.61□□□□□ -0.23
COPS4-210ENST00000511708 ZNF302Q9NR11 478 aa13.61□□□□□ -0.23
COPS4-210ENST00000511708 ZFP37Q9Y6Q3 630 aaPredicted RBP13.61□□□□□ -0.23
COPS4-210ENST00000511708 MEIS3P2A8K0S8 358 aa13.6□□□□□ -0.23
COPS4-210ENST00000511708 OFD1O75665 1012 aa13.6□□□□□ -0.23
COPS4-210ENST00000511708 GLUD1P00367 558 aa13.6□□□□□ -0.23
COPS4-210ENST00000511708 ADH1AP07327 375 aa13.6□□□□□ -0.23
COPS4-210ENST00000511708 RETP07949 1114 aa13.6□□□□□ -0.23
COPS4-210ENST00000511708 FGFR4P22455 802 aa13.6□□□□□ -0.23
COPS4-210ENST00000511708 GPC3P51654 580 aa13.6□□□□□ -0.23
COPS4-210ENST00000511708 FZD5Q13467 585 aa13.6□□□□□ -0.23
COPS4-210ENST00000511708 CEP55Q53EZ4 464 aa13.6□□□□□ -0.23
COPS4-210ENST00000511708 N4BP2L1Q5TBK1 243 aaPredicted RBP13.6□□□□□ -0.23
COPS4-210ENST00000511708 ELMSAN1Q6PJG2 1045 aa13.6□□□□□ -0.23
COPS4-210ENST00000511708 PARM1Q6UWI2 310 aa13.6□□□□□ -0.23
COPS4-210ENST00000511708 GLB1LQ6UWU2 654 aa13.6□□□□□ -0.23
COPS4-210ENST00000511708 PRR23CQ6ZRP0 262 aa13.6□□□□□ -0.23
COPS4-210ENST00000511708 ZNF280BQ86YH2 543 aa13.6□□□□□ -0.23
COPS4-210ENST00000511708 MAP7D2Q96T17 732 aa13.6□□□□□ -0.23
COPS4-210ENST00000511708 NT5C3AQ9H0P0 336 aa13.6□□□□□ -0.23
COPS4-210ENST00000511708 RXFP1Q9HBX9 757 aa13.6□□□□□ -0.23
COPS4-210ENST00000511708 CHST12Q9NRB3 414 aa13.6□□□□□ -0.23
COPS4-210ENST00000511708 SEMA4GQ9NTN9 838 aa13.6□□□□□ -0.23
COPS4-210ENST00000511708 AKT3Q9Y243 479 aa13.6□□□□□ -0.23
COPS4-210ENST00000511708 MAFBQ9Y5Q3 323 aaPredicted RBP13.6□□□□□ -0.23
COPS4-210ENST00000511708 MEIS1O00470 390 aa13.59□□□□□ -0.23
COPS4-210ENST00000511708 IFIT3O14879 490 aaKnown RBP13.59□□□□□ -0.23
COPS4-210ENST00000511708 MAGEB2O15479 319 aa13.59□□□□□ -0.23
COPS4-210ENST00000511708 GDF9O60383 454 aa13.59□□□□□ -0.23
COPS4-210ENST00000511708 EFEMP2O95967 443 aa13.59□□□□□ -0.23
COPS4-210ENST00000511708 C1RP00736 705 aa13.59□□□□□ -0.23
COPS4-210ENST00000511708 SOD2P04179 222 aa13.59□□□□□ -0.23
COPS4-210ENST00000511708 CD72P21854 359 aa13.59□□□□□ -0.23
COPS4-210ENST00000511708 TARSP26639 723 aaKnown RBP13.59□□□□□ -0.23
COPS4-210ENST00000511708 CSRP2Q16527 193 aa13.59□□□□□ -0.23
COPS4-210ENST00000511708 ZBTB41Q5SVQ8 909 aa13.59□□□□□ -0.23
COPS4-210ENST00000511708 SWSAP1Q6NVH7 229 aa13.59□□□□□ -0.23
COPS4-210ENST00000511708 EFCAB12Q6NXP0 572 aa13.59□□□□□ -0.23
COPS4-210ENST00000511708 CWC27Q6UX04 472 aaKnown RBP13.59□□□□□ -0.23
COPS4-210ENST00000511708 RNF168Q8IYW5 571 aaPredicted RBP13.59□□□□□ -0.23
COPS4-210ENST00000511708 CELF5Q8N6W0 485 aaKnown RBP13.59□□□□□ -0.23
COPS4-210ENST00000511708 ZNF668Q96K58 619 aaPredicted RBP13.59□□□□□ -0.23
COPS4-210ENST00000511708 MAP3K14Q99558 947 aa13.59□□□□□ -0.23
COPS4-210ENST00000511708 HERC2P3Q9BVR0 1158 aa13.59□□□□□ -0.23
COPS4-210ENST00000511708 PLEKHA4Q9H4M7 779 aa13.59□□□□□ -0.23
COPS4-210ENST00000511708 LY9Q9HBG7 655 aa13.59□□□□□ -0.23
COPS4-210ENST00000511708 ZDHHC7Q9NXF8 308 aa13.59□□□□□ -0.23
COPS4-210ENST00000511708 SEC63Q9UGP8 760 aaKnown RBP13.59□□□□□ -0.23
COPS4-210ENST00000511708 NOTCH4Q99466 2003 aa13.59□□□□□ -0.23
COPS4-210ENST00000511708 FLNBO75369 2602 aaKnown RBP13.59□□□□□ -0.23
COPS4-210ENST00000511708 LAMA1P25391 3075 aa13.58□□□□□ -0.23
COPS4-210ENST00000511708 C2CD2LO14523 706 aa13.58□□□□□ -0.24
COPS4-210ENST00000511708 TM4SF5O14894 197 aa13.58□□□□□ -0.24
COPS4-210ENST00000511708 DHX15O43143 795 aaKnown RBP13.58□□□□□ -0.24
COPS4-210ENST00000511708 ZNF623O75123 536 aa13.58□□□□□ -0.24
COPS4-210ENST00000511708 DDHD2O94830 711 aa13.58□□□□□ -0.24
COPS4-210ENST00000511708 URODP06132 367 aa13.58□□□□□ -0.24
COPS4-210ENST00000511708 MYBP10242 640 aa13.58□□□□□ -0.24
COPS4-210ENST00000511708 AK2P54819 239 aa13.58□□□□□ -0.24
COPS4-210ENST00000511708 RNASELQ05823 741 aaKnown RBP13.58□□□□□ -0.24
COPS4-210ENST00000511708 LPAL2Q16609 132 aa13.58□□□□□ -0.24
COPS4-210ENST00000511708 ANKRD45Q5TZF3 282 aa13.58□□□□□ -0.24
COPS4-210ENST00000511708 MIS18BP1Q6P0N0 1132 aa13.58□□□□□ -0.24
COPS4-210ENST00000511708 LRRC71Q8N4P6 559 aa13.58□□□□□ -0.24
COPS4-210ENST00000511708 RILPL2Q969X0 211 aa13.58□□□□□ -0.24
COPS4-210ENST00000511708 NELL2Q99435 816 aa13.58□□□□□ -0.24
COPS4-210ENST00000511708 TMEM175Q9BSA9 504 aa13.58□□□□□ -0.24
COPS4-210ENST00000511708 MYL10Q9BUA6 226 aa13.58□□□□□ -0.24
COPS4-210ENST00000511708 PRKD2Q9BZL6 878 aa13.58□□□□□ -0.24
COPS4-210ENST00000511708 GBP3Q9H0R5 595 aa13.58□□□□□ -0.24
COPS4-210ENST00000511708 PIDD1Q9HB75 910 aa13.58□□□□□ -0.24
COPS4-210ENST00000511708 RCAN3Q9UKA8 241 aa13.58□□□□□ -0.24
COPS4-210ENST00000511708 RAB23Q9ULC3 237 aa13.58□□□□□ -0.24
COPS4-210ENST00000511708 CEP131Q9UPN4 1083 aa13.58□□□□□ -0.24
COPS4-210ENST00000511708 SSX2IPQ9Y2D8 614 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms