RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 DEXIO95424 95 aa9.74□□□□□ -0.85
PDPN-209ENST00000510906 CHRNA1P02708 482 aa9.74□□□□□ -0.85
PDPN-209ENST00000510906 GHRP10912 638 aa9.74□□□□□ -0.85
PDPN-209ENST00000510906 CIITAP33076 1130 aa9.74□□□□□ -0.85
PDPN-209ENST00000510906 EIF1AXP47813 144 aaKnown RBP9.74□□□□□ -0.85
PDPN-209ENST00000510906 ANAPC15P60006 121 aa9.74□□□□□ -0.85
PDPN-209ENST00000510906 MGAT3Q09327 533 aa9.74□□□□□ -0.85
PDPN-209ENST00000510906 SCRN1Q12765 414 aa9.74□□□□□ -0.85
PDPN-209ENST00000510906 TAF2Q6P1X5 1199 aa9.74□□□□□ -0.85
PDPN-209ENST00000510906 CPLX2Q6PUV4 134 aaKnown RBP9.74□□□□□ -0.85
PDPN-209ENST00000510906 ABHD15Q6UXT9 468 aa9.74□□□□□ -0.85
PDPN-209ENST00000510906 PLPPR4Q7Z2D5 763 aa9.74□□□□□ -0.85
PDPN-209ENST00000510906 RPAINQ86UA6 219 aa9.74□□□□□ -0.85
PDPN-209ENST00000510906 CCDC60Q8IWA6 550 aaPredicted RBP9.74□□□□□ -0.85
PDPN-209ENST00000510906 MYOCDQ8IZQ8 938 aa9.74□□□□□ -0.85
PDPN-209ENST00000510906 ARNTL2Q8WYA1 636 aa9.74□□□□□ -0.85
PDPN-209ENST00000510906 LENG9Q96B70 501 aa9.74□□□□□ -0.85
PDPN-209ENST00000510906 ZNF577Q9BSK1 485 aa9.74□□□□□ -0.85
PDPN-209ENST00000510906 FAM49AQ9H0Q0 323 aaPredicted RBP9.74□□□□□ -0.85
PDPN-209ENST00000510906 TPCN1Q9ULQ1 816 aa9.74□□□□□ -0.85
PDPN-209ENST00000510906 PCDHA4Q9UN74 947 aa9.74□□□□□ -0.85
PDPN-209ENST00000510906 ZFHX4Q86UP3 3567 aa9.74□□□□□ -0.85
PDPN-209ENST00000510906 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.73□□□□□ -0.85
PDPN-209ENST00000510906 PFKFB2O60825 505 aa9.73□□□□□ -0.85
PDPN-209ENST00000510906 AMHP03971 560 aa9.73□□□□□ -0.85
PDPN-209ENST00000510906 AK2P54819 239 aa9.73□□□□□ -0.85
PDPN-209ENST00000510906 SETQ01105 290 aaPredicted RBP9.73□□□□□ -0.85
PDPN-209ENST00000510906 LPIN1Q14693 890 aa9.73□□□□□ -0.85
PDPN-209ENST00000510906 COL19A1Q14993 1142 aa9.73□□□□□ -0.85
PDPN-209ENST00000510906 NPY5RQ15761 445 aa9.73□□□□□ -0.85
PDPN-209ENST00000510906 CCDC85BQ15834 202 aaPredicted RBP9.73□□□□□ -0.85
PDPN-209ENST00000510906 FAM160B1Q5W0V3 765 aa9.73□□□□□ -0.85
PDPN-209ENST00000510906 TMEM214Q6NUQ4 689 aaKnown RBP9.73□□□□□ -0.85
PDPN-209ENST00000510906 SWSAP1Q6NVH7 229 aa9.73□□□□□ -0.85
PDPN-209ENST00000510906 MIS18BP1Q6P0N0 1132 aa9.73□□□□□ -0.85
PDPN-209ENST00000510906 RSPH3Q86UC2 560 aa9.73□□□□□ -0.85
PDPN-209ENST00000510906 TBCKQ8TEA7 893 aa9.73□□□□□ -0.85
PDPN-209ENST00000510906 INSM2Q96T92 566 aaPredicted RBP9.73□□□□□ -0.85
PDPN-209ENST00000510906 RAD9AQ99638 391 aa9.73□□□□□ -0.85
PDPN-209ENST00000510906 IFIH1Q9BYX4 1025 aaKnown RBP9.73□□□□□ -0.85
PDPN-209ENST00000510906 SLKQ9H2G2 1235 aaPredicted RBP9.73□□□□□ -0.85
PDPN-209ENST00000510906 ZNF302Q9NR11 478 aa9.73□□□□□ -0.85
PDPN-209ENST00000510906 TBC1D22BQ9NU19 505 aa9.73□□□□□ -0.85
PDPN-209ENST00000510906 KCNJ14Q9UNX9 436 aa9.73□□□□□ -0.85
PDPN-209ENST00000510906 ZNF232Q9UNY5 417 aa9.73□□□□□ -0.85
PDPN-209ENST00000510906 CDY2AQ9Y6F7 541 aa9.73□□□□□ -0.85
PDPN-209ENST00000510906 LINC01553A4QN01 128 aa9.72□□□□□ -0.85
PDPN-209ENST00000510906 MSH4O15457 936 aa9.72□□□□□ -0.85
PDPN-209ENST00000510906 CAPN5O15484 640 aaPredicted RBP9.72□□□□□ -0.85
PDPN-209ENST00000510906 FZD6O60353 706 aa9.72□□□□□ -0.85
PDPN-209ENST00000510906 CTDNEP1O95476 244 aa9.72□□□□□ -0.85
PDPN-209ENST00000510906 ATP4AP20648 1035 aa9.72□□□□□ -0.85
PDPN-209ENST00000510906 SLC26A2P50443 739 aa9.72□□□□□ -0.85
PDPN-209ENST00000510906 MRPS6P82932 125 aaKnown RBP9.72□□□□□ -0.85
PDPN-209ENST00000510906 TMEM62Q0P6H9 643 aa9.72□□□□□ -0.85
PDPN-209ENST00000510906 FBXO47Q5MNV8 452 aa9.72□□□□□ -0.85
PDPN-209ENST00000510906 KRT40Q6A162 431 aa9.72□□□□□ -0.85
PDPN-209ENST00000510906 ALKBH2Q6NS38 261 aa9.72□□□□□ -0.85
PDPN-209ENST00000510906 ZNF746Q6NUN9 644 aaPredicted RBP9.72□□□□□ -0.85
PDPN-209ENST00000510906 BLIDQ8IZY5 108 aa9.72□□□□□ -0.85
PDPN-209ENST00000510906 MICALL1Q8N3F8 863 aa9.72□□□□□ -0.85
PDPN-209ENST00000510906 DAGLBQ8NCG7 672 aa9.72□□□□□ -0.85
PDPN-209ENST00000510906 ATP8B4Q8TF62 1192 aa9.72□□□□□ -0.85
PDPN-209ENST00000510906 GJA10Q969M2 543 aa9.72□□□□□ -0.85
PDPN-209ENST00000510906 IL17RAQ96F46 866 aa9.72□□□□□ -0.85
PDPN-209ENST00000510906 PHACTR1Q9C0D0 580 aa9.72□□□□□ -0.85
PDPN-209ENST00000510906 GJB4Q9NTQ9 266 aa9.72□□□□□ -0.85
PDPN-209ENST00000510906 MTUS1Q9ULD2 1270 aa9.72□□□□□ -0.85
PDPN-209ENST00000510906 PCDHA2Q9Y5H9 948 aa9.72□□□□□ -0.85
PDPN-209ENST00000510906 MYO9BQ13459 2157 aa9.72□□□□□ -0.85
PDPN-209ENST00000510906 GBF1Q92538 1859 aa9.72□□□□□ -0.85
PDPN-209ENST00000510906 CHD9Q3L8U1 2897 aa9.71□□□□□ -0.85
PDPN-209ENST00000510906 SMIM35A0A1B0GVV1 85 aa9.71□□□□□ -0.86
PDPN-209ENST00000510906 ZBTB42B2RXF5 422 aa9.71□□□□□ -0.86
PDPN-209ENST00000510906 HBP1O60381 514 aa9.71□□□□□ -0.86
PDPN-209ENST00000510906 CDKL5O76039 1030 aa9.71□□□□□ -0.86
PDPN-209ENST00000510906 UPP2O95045 317 aa9.71□□□□□ -0.86
PDPN-209ENST00000510906 LARGE1O95461 756 aa9.71□□□□□ -0.86
PDPN-209ENST00000510906 TDP2O95551 362 aa9.71□□□□□ -0.86
PDPN-209ENST00000510906 AVPP01185 164 aa9.71□□□□□ -0.86
PDPN-209ENST00000510906 BRD2P25440 801 aaKnown RBP9.71□□□□□ -0.86
PDPN-209ENST00000510906 KLRC1P26715 233 aa9.71□□□□□ -0.86
PDPN-209ENST00000510906 USP11P51784 963 aa9.71□□□□□ -0.86
PDPN-209ENST00000510906 HTRA4P83105 476 aaPredicted RBP9.71□□□□□ -0.86
PDPN-209ENST00000510906 KRT76Q01546 638 aa9.71□□□□□ -0.86
PDPN-209ENST00000510906 GRB10Q13322 594 aa9.71□□□□□ -0.86
PDPN-209ENST00000510906 C4orf17Q53FE4 359 aa9.71□□□□□ -0.86
PDPN-209ENST00000510906 MTHFD1LQ6UB35 978 aa9.71□□□□□ -0.86
PDPN-209ENST00000510906 TRMT1LQ7Z2T5 733 aaKnown RBP9.71□□□□□ -0.86
PDPN-209ENST00000510906 CKAP2LQ8IYA6 745 aa9.71□□□□□ -0.86
PDPN-209ENST00000510906 SMAP1Q8IYB5 467 aaPredicted RBP9.71□□□□□ -0.86
PDPN-209ENST00000510906 NECAB1Q8N987 351 aa9.71□□□□□ -0.86
PDPN-209ENST00000510906 GDPD5Q8WTR4 605 aa9.71□□□□□ -0.86
PDPN-209ENST00000510906 APBB2Q92870 758 aa9.71□□□□□ -0.86
PDPN-209ENST00000510906 TNPO1Q92973 898 aaKnown RBP9.71□□□□□ -0.86
PDPN-209ENST00000510906 TOP1MTQ969P6 601 aa9.71□□□□□ -0.86
PDPN-209ENST00000510906 CITED4Q96RK1 184 aa9.71□□□□□ -0.86
PDPN-209ENST00000510906 AGO3Q9H9G7 860 aaKnown RBP9.71□□□□□ -0.86
PDPN-209ENST00000510906 GABBR1Q9UBS5 961 aa9.71□□□□□ -0.86
PDPN-209ENST00000510906 TCEAL9Q9UHQ7 104 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms