RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 MAGED4Q96JG8 741 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 TTLL1O95922 423 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 TRIM16LQ309B1 348 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 BBS9Q3SYG4 887 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 WLSQ5T9L3 541 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 OTUD7BQ6GQQ9 843 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 CDR2LQ86X02 465 aaPredicted RBP8.88□□□□□ -0.99
HTT-208ENST00000510626 AMNQ9BXJ7 453 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 SLC24A3Q9HC58 644 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 GPHNQ9NQX3 736 aaPredicted RBP8.88□□□□□ -0.99
HTT-208ENST00000510626 CDV3Q9UKY7 258 aaKnown RBP8.88□□□□□ -0.99
HTT-208ENST00000510626 FSBPO95073 299 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 SAMSN1Q9NSI8 373 aaKnown RBP8.88□□□□□ -0.99
HTT-208ENST00000510626 WDR64B1ANS9 1081 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 KRT19P08727 400 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 RGS2P41220 211 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 BEST2Q8NFU1 509 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 FAF2Q96CS3 445 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 TIPINQ9BVW5 301 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 SAYSD1Q9NPB0 183 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 GTPBP10A4D1E9 387 aaKnown RBP8.88□□□□□ -0.99
HTT-208ENST00000510626 CDK17Q00537 523 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 STMN3Q9NZ72 180 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 FNTAP49354 379 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 SLC7A5Q01650 507 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 CSTF3Q12996 717 aaKnown RBP8.88□□□□□ -0.99
HTT-208ENST00000510626 ZNF710Q8N1W2 664 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 TTLL11Q8NHH1 800 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 SERPINB12Q96P63 405 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 S100A1P23297 94 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 PSMA2P25787 234 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 FBXO11Q86XK2 927 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 ST13P5Q8NFI4 369 aaPredicted RBP8.88□□□□□ -0.99
HTT-208ENST00000510626 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.88□□□□□ -0.99
HTT-208ENST00000510626 EMILIN3Q9NT22 766 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 CDK12Q9NYV4 1490 aaPredicted RBP8.88□□□□□ -0.99
HTT-208ENST00000510626 CFLARO15519 480 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 CBFA2T3O75081 653 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 FTCDO95954 541 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 KRT14P02533 472 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 CLCN2P51788 898 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 ZBTB41Q5SVQ8 909 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 PPP4R4Q6NUP7 873 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 NEK10Q6ZWH5 1172 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 ARMCX2Q7L311 632 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 PNMA6FA0A0J9YX94 578 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 SASH1O94885 1247 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 RUNX1T1Q06455 604 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 NYAP1Q6ZVC0 841 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 GJA10Q969M2 543 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 CLIC6Q96NY7 704 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 SLC38A10Q9HBR0 1119 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 UBA2Q9UBT2 640 aaPredicted RBP8.88□□□□□ -0.99
HTT-208ENST00000510626 ZBBXA8MT70 800 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 ADD1P35611 737 aaKnown RBP8.88□□□□□ -0.99
HTT-208ENST00000510626 DNAAF3Q8N9W5 541 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 NUP85Q9BW27 656 aa8.88□□□□□ -0.99
HTT-208ENST00000510626 URB1O60287 2271 aaKnown RBP8.87□□□□□ -0.99
HTT-208ENST00000510626 CARSP49589 748 aaKnown RBP8.87□□□□□ -0.99
HTT-208ENST00000510626 CCNI2Q6ZMN8 369 aaPredicted RBP8.87□□□□□ -0.99
HTT-208ENST00000510626 SLC7A3Q8WY07 619 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 FAM161BQ96MY7 647 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 DKK3Q9UBP4 350 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 CASP2P42575 452 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 TRMT5Q32P41 509 aaKnown RBP8.87□□□□□ -0.99
HTT-208ENST00000510626 ZNF473Q8WTR7 871 aaKnown RBP8.87□□□□□ -0.99
HTT-208ENST00000510626 CCT7Q99832 543 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 CNGB3Q9NQW8 809 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 RGS9BPQ6ZS82 235 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 NLRP9Q7RTR0 991 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 HDDC2Q7Z4H3 204 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 SCFD1Q8WVM8 642 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 OSBPL8Q9BZF1 889 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 SLC40A1Q9NP59 571 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 MYO9BQ13459 2157 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 H3BNX3 289 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 TSSK1BQ9BXA7 367 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 SQORQ9Y6N5 450 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 MAP3K19Q56UN5 1328 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 LDHAP00338 332 aaKnown RBP8.87□□□□□ -0.99
HTT-208ENST00000510626 RCOR2Q8IZ40 523 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 ACTN3Q08043 901 aaPredicted RBP8.87□□□□□ -0.99
HTT-208ENST00000510626 KANSL2Q9H9L4 492 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 OLFML3Q9NRN5 406 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 SOX6P35712 828 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 TRABDQ9H4I3 376 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 UTP6Q9NYH9 597 aaKnown RBP8.87□□□□□ -0.99
HTT-208ENST00000510626 TBK1Q9UHD2 729 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 TMTC4Q5T4D3 741 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 GIMAP8Q8ND71 665 aaPredicted RBP8.87□□□□□ -0.99
HTT-208ENST00000510626 PLEKHA4Q9H4M7 779 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 COG4Q9H9E3 785 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 XIAPP98170 497 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 KIF19Q2TAC6 998 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 P3H1Q32P28 736 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 ADCK5Q3MIX3 580 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 ADAT2Q7Z6V5 191 aaKnown RBP8.87□□□□□ -0.99
HTT-208ENST00000510626 LUZP2Q86TE4 346 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 ADCK1Q86TW2 530 aa8.87□□□□□ -0.99
HTT-208ENST00000510626 EFHBQ8N7U6 833 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms