RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 LINC01565O15544 149 aa25.58■■□□□ 1.69
SNF8-209ENST00000510558 DGAT1O75907 488 aa25.58■■□□□ 1.69
SNF8-209ENST00000510558 SPATA31C1P0DKV0 1188 aa25.58■■□□□ 1.69
SNF8-209ENST00000510558 PBX3P40426 434 aa25.58■■□□□ 1.69
SNF8-209ENST00000510558 TECP42680 631 aa25.58■■□□□ 1.69
SNF8-209ENST00000510558 RAB27AP51159 221 aa25.58■■□□□ 1.69
SNF8-209ENST00000510558 DLX2Q07687 328 aaPredicted RBP25.58■■□□□ 1.69
SNF8-209ENST00000510558 MXD4Q14582 209 aaPredicted RBP25.58■■□□□ 1.69
SNF8-209ENST00000510558 MICAL1Q8TDZ2 1067 aa25.58■■□□□ 1.69
SNF8-209ENST00000510558 LPPQ93052 612 aa25.58■■□□□ 1.69
SNF8-209ENST00000510558 MRPL9Q9BYD2 267 aaKnown RBP25.58■■□□□ 1.69
SNF8-209ENST00000510558 TUFT1Q9NNX1 390 aa25.58■■□□□ 1.69
SNF8-209ENST00000510558 LZTS1Q9Y250 596 aa25.58■■□□□ 1.69
SNF8-209ENST00000510558 A0A087WWV3 80 aa25.57■■□□□ 1.68
SNF8-209ENST00000510558 ZNF623O75123 536 aa25.57■■□□□ 1.68
SNF8-209ENST00000510558 TBX10O75333 385 aa25.57■■□□□ 1.68
SNF8-209ENST00000510558 XRCC6P12956 609 aaKnown RBP eCLIP25.57■■□□□ 1.681e-6■■■■■ 27.1
SNF8-209ENST00000510558 PPM1AP35813 382 aa25.57■■□□□ 1.68
SNF8-209ENST00000510558 TRAPPC10P48553 1259 aa25.57■■□□□ 1.68
SNF8-209ENST00000510558 PLCB3Q01970 1234 aa25.57■■□□□ 1.68
SNF8-209ENST00000510558 ADAM15Q13444 863 aa25.57■■□□□ 1.68
SNF8-209ENST00000510558 LONRF3Q496Y0 759 aa25.57■■□□□ 1.68
SNF8-209ENST00000510558 FAM178BQ8IXR5 827 aa25.57■■□□□ 1.68
SNF8-209ENST00000510558 MRPS27Q92552 414 aaKnown RBP25.57■■□□□ 1.68
SNF8-209ENST00000510558 NOL7Q9UMY1 257 aaKnown RBP25.57■■□□□ 1.68
SNF8-209ENST00000510558 MED24O75448 989 aa25.56■■□□□ 1.68
SNF8-209ENST00000510558 U2AF2P26368 475 aaKnown RBP eCLIP25.56■■□□□ 1.688e-7■□□□□ 10.3
SNF8-209ENST00000510558 NRIP1P48552 1158 aa25.56■■□□□ 1.68
SNF8-209ENST00000510558 ERVFC1P60507 584 aa25.56■■□□□ 1.68
SNF8-209ENST00000510558 RBM23Q86U06 439 aaKnown RBP25.56■■□□□ 1.68
SNF8-209ENST00000510558 CATSPER3Q86XQ3 398 aa25.56■■□□□ 1.68
SNF8-209ENST00000510558 EFHBQ8N7U6 833 aa25.56■■□□□ 1.68
SNF8-209ENST00000510558 ASAP3Q8TDY4 903 aa25.56■■□□□ 1.68
SNF8-209ENST00000510558 RSPH1Q8WYR4 309 aa25.56■■□□□ 1.68
SNF8-209ENST00000510558 SPG21Q9NZD8 308 aa25.56■■□□□ 1.68
SNF8-209ENST00000510558 PUF60Q9UHX1 559 aaKnown RBP25.56■■□□□ 1.68
SNF8-209ENST00000510558 FAM50BQ9Y247 325 aa25.56■■□□□ 1.68
SNF8-209ENST00000510558 MEIS3P2A8K0S8 358 aa25.55■■□□□ 1.68
SNF8-209ENST00000510558 FSCN2O14926 492 aa25.55■■□□□ 1.68
SNF8-209ENST00000510558 USO1O60763 962 aaKnown RBP25.55■■□□□ 1.68
SNF8-209ENST00000510558 HOXA11P31270 313 aaPredicted RBP25.55■■□□□ 1.68
SNF8-209ENST00000510558 NDUFV1P49821 464 aa25.55■■□□□ 1.68
SNF8-209ENST00000510558 PTENP60484 403 aa25.55■■□□□ 1.68
SNF8-209ENST00000510558 TFDP1Q14186 410 aa25.55■■□□□ 1.68
SNF8-209ENST00000510558 NBR1Q14596 966 aa25.55■■□□□ 1.68
SNF8-209ENST00000510558 CLUL1Q15846 466 aa25.55■■□□□ 1.68
SNF8-209ENST00000510558 PDE12Q6L8Q7 609 aaKnown RBP25.55■■□□□ 1.68
SNF8-209ENST00000510558 GLB1LQ6UWU2 654 aa25.55■■□□□ 1.68
SNF8-209ENST00000510558 POLR3CQ9BUI4 534 aaPredicted RBP25.55■■□□□ 1.68
SNF8-209ENST00000510558 CD320Q9NPF0 282 aa25.55■■□□□ 1.68
SNF8-209ENST00000510558 PCDHB2Q9Y5E7 798 aa25.55■■□□□ 1.68
SNF8-209ENST00000510558 ERLIN2O94905 339 aa25.54■■□□□ 1.68
SNF8-209ENST00000510558 ARL2P36404 184 aa25.54■■□□□ 1.68
SNF8-209ENST00000510558 POU5F1BQ06416 359 aa25.54■■□□□ 1.68
SNF8-209ENST00000510558 CAPSQ13938 189 aa25.54■■□□□ 1.68
SNF8-209ENST00000510558 IFNLR1Q8IU57 520 aaPredicted RBP25.54■■□□□ 1.68
SNF8-209ENST00000510558 SLC39A11Q8N1S5 342 aa25.54■■□□□ 1.68
SNF8-209ENST00000510558 ERMNQ8TAM6 284 aa25.54■■□□□ 1.68
SNF8-209ENST00000510558 PGBD4Q96DM1 585 aa25.54■■□□□ 1.68
SNF8-209ENST00000510558 TMX3Q96JJ7 454 aa25.54■■□□□ 1.68
SNF8-209ENST00000510558 TLE6Q9H808 572 aa25.54■■□□□ 1.68
SNF8-209ENST00000510558 INPP5FQ9Y2H2 1132 aa25.54■■□□□ 1.68
SNF8-209ENST00000510558 KIF3AQ9Y496 699 aa25.54■■□□□ 1.68
SNF8-209ENST00000510558 OFD1O75665 1012 aa25.53■■□□□ 1.68
SNF8-209ENST00000510558 CD2BP2O95400 341 aaKnown RBP25.53■■□□□ 1.68
SNF8-209ENST00000510558 GLRA2P23416 452 aa25.53■■□□□ 1.68
SNF8-209ENST00000510558 RPA1P27694 616 aa25.53■■□□□ 1.68
SNF8-209ENST00000510558 BCAR1P56945 870 aa25.53■■□□□ 1.68
SNF8-209ENST00000510558 KRT17Q04695 432 aa25.53■■□□□ 1.68
SNF8-209ENST00000510558 PCBP1Q15365 356 aaKnown RBP eCLIP25.53■■□□□ 1.68
SNF8-209ENST00000510558 NOMO2Q5JPE7 1267 aa25.53■■□□□ 1.68
SNF8-209ENST00000510558 UBXN11Q5T124 520 aa25.53■■□□□ 1.68
SNF8-209ENST00000510558 PLPP4Q5VZY2 271 aa25.53■■□□□ 1.68
SNF8-209ENST00000510558 POTEGQ6S5H5 508 aa25.53■■□□□ 1.68
SNF8-209ENST00000510558 C4orf32Q8N8J7 132 aa25.53■■□□□ 1.68
SNF8-209ENST00000510558 NACC1Q96RE7 527 aa25.53■■□□□ 1.68
SNF8-209ENST00000510558 POLR3FQ9H1D9 316 aaPredicted RBP25.53■■□□□ 1.68
SNF8-209ENST00000510558 CD207Q9UJ71 328 aa25.53■■□□□ 1.68
SNF8-209ENST00000510558 DBR1Q9UK59 544 aaKnown RBP25.53■■□□□ 1.68
SNF8-209ENST00000510558 INO80B-WBP1J3KQ70 363 aa25.52■■□□□ 1.68
SNF8-209ENST00000510558 PER2O15055 1255 aa25.52■■□□□ 1.68
SNF8-209ENST00000510558 MBTPS2O43462 519 aa25.52■■□□□ 1.68
SNF8-209ENST00000510558 GLP2RO95838 553 aa25.52■■□□□ 1.68
SNF8-209ENST00000510558 ALDH7A1P49419 539 aaKnown RBP25.52■■□□□ 1.68
SNF8-209ENST00000510558 AGMOQ6ZNB7 445 aa25.52■■□□□ 1.68
SNF8-209ENST00000510558 MRPL10Q7Z7H8 261 aaKnown RBP25.52■■□□□ 1.68
SNF8-209ENST00000510558 TCF25Q9BQ70 676 aa25.52■■□□□ 1.68
SNF8-209ENST00000510558 ENTPD7Q9NQZ7 604 aa25.52■■□□□ 1.68
SNF8-209ENST00000510558 TBC1D13Q9NVG8 400 aa25.52■■□□□ 1.68
SNF8-209ENST00000510558 NT5C1B-RDH14C9J2C7 533 aa25.51■■□□□ 1.67
SNF8-209ENST00000510558 TSPAN1O60635 241 aa25.51■■□□□ 1.67
SNF8-209ENST00000510558 ZC3H11AO75152 810 aaKnown RBP eCLIP25.51■■□□□ 1.67
SNF8-209ENST00000510558 AXLP30530 894 aa25.51■■□□□ 1.67
SNF8-209ENST00000510558 TOB1P50616 345 aaPredicted RBP25.51■■□□□ 1.67
SNF8-209ENST00000510558 FXR2P51116 673 aaKnown RBP eCLIP25.51■■□□□ 1.67
SNF8-209ENST00000510558 MBTD1Q05BQ5 628 aa25.51■■□□□ 1.67
SNF8-209ENST00000510558 SMAD4Q13485 552 aaKnown RBP25.51■■□□□ 1.67
SNF8-209ENST00000510558 DUSP6Q16828 381 aa25.51■■□□□ 1.67
SNF8-209ENST00000510558 HAUS3Q68CZ6 603 aa25.51■■□□□ 1.67
SNF8-209ENST00000510558 MAEAQ7L5Y9 396 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms