RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 MTCH2Q9Y6C9 303 aa13.03□□□□□ -0.32
HMGXB3-203ENST00000510472 TSPAN1O60635 241 aa13.02□□□□□ -0.33
HMGXB3-203ENST00000510472 RB1P06400 928 aa13.02□□□□□ -0.33
HMGXB3-203ENST00000510472 HSP90AA1P07900 732 aaKnown RBP13.02□□□□□ -0.33
HMGXB3-203ENST00000510472 FGFR1P11362 822 aa13.02□□□□□ -0.33
HMGXB3-203ENST00000510472 GUCY2CP25092 1073 aa13.02□□□□□ -0.33
HMGXB3-203ENST00000510472 AXLP30530 894 aa13.02□□□□□ -0.33
HMGXB3-203ENST00000510472 NAMPTP43490 491 aa13.02□□□□□ -0.33
HMGXB3-203ENST00000510472 SLC12A3P55017 1021 aa13.02□□□□□ -0.33
HMGXB3-203ENST00000510472 MAPK7Q13164 816 aa13.02□□□□□ -0.33
HMGXB3-203ENST00000510472 BTG3Q14201 252 aaPredicted RBP13.02□□□□□ -0.33
HMGXB3-203ENST00000510472 FAM187BQ17R55 369 aa13.02□□□□□ -0.33
HMGXB3-203ENST00000510472 LRRC55Q6ZSA7 311 aa13.02□□□□□ -0.33
HMGXB3-203ENST00000510472 SPRYD3Q8NCJ5 442 aa13.02□□□□□ -0.33
HMGXB3-203ENST00000510472 NTPCRQ9BSD7 190 aaKnown RBP13.02□□□□□ -0.33
HMGXB3-203ENST00000510472 TMEM117Q9H0C3 514 aa13.02□□□□□ -0.33
HMGXB3-203ENST00000510472 POLD4Q9HCU8 107 aa13.02□□□□□ -0.33
HMGXB3-203ENST00000510472 BLOC1S4Q9NUP1 217 aa13.02□□□□□ -0.33
HMGXB3-203ENST00000510472 LMCD1Q9NZU5 365 aa13.02□□□□□ -0.33
HMGXB3-203ENST00000510472 LRFN2Q9ULH4 789 aa13.02□□□□□ -0.33
HMGXB3-203ENST00000510472 PIN4Q9Y237 131 aaKnown RBP13.02□□□□□ -0.33
HMGXB3-203ENST00000510472 ZDHHC9Q9Y397 364 aa13.02□□□□□ -0.33
HMGXB3-203ENST00000510472 MRPL42Q9Y6G3 142 aaKnown RBP13.02□□□□□ -0.33
HMGXB3-203ENST00000510472 MYO9BQ13459 2157 aa13.02□□□□□ -0.33
HMGXB3-203ENST00000510472 A0A1B0GUA9 196 aa13.01□□□□□ -0.33
HMGXB3-203ENST00000510472 H3BNC9 293 aa13.01□□□□□ -0.33
HMGXB3-203ENST00000510472 INO80B-WBP1J3KQ70 363 aa13.01□□□□□ -0.33
HMGXB3-203ENST00000510472 F13A1P00488 732 aa13.01□□□□□ -0.33
HMGXB3-203ENST00000510472 PLA2G4BP0C869 781 aa13.01□□□□□ -0.33
HMGXB3-203ENST00000510472 SKIP12755 728 aa13.01□□□□□ -0.33
HMGXB3-203ENST00000510472 UBA7P41226 1012 aa13.01□□□□□ -0.33
HMGXB3-203ENST00000510472 CEBPZQ03701 1054 aaKnown RBP13.01□□□□□ -0.33
HMGXB3-203ENST00000510472 ARSHQ5FYA8 562 aa13.01□□□□□ -0.33
HMGXB3-203ENST00000510472 CLLU1OSQ5K130 101 aa13.01□□□□□ -0.33
HMGXB3-203ENST00000510472 PPP4R3CPQ6ZMV5 832 aa13.01□□□□□ -0.33
HMGXB3-203ENST00000510472 FBXO22Q8NEZ5 403 aa13.01□□□□□ -0.33
HMGXB3-203ENST00000510472 MAFAQ8NHW3 353 aaPredicted RBP13.01□□□□□ -0.33
HMGXB3-203ENST00000510472 KIFAP3Q92845 792 aa13.01□□□□□ -0.33
HMGXB3-203ENST00000510472 EPSTI1Q96J88 318 aa13.01□□□□□ -0.33
HMGXB3-203ENST00000510472 CLIC6Q96NY7 704 aa13.01□□□□□ -0.33
HMGXB3-203ENST00000510472 PLIN2Q99541 437 aa13.01□□□□□ -0.33
HMGXB3-203ENST00000510472 CCDC113Q9H0I3 377 aa13.01□□□□□ -0.33
HMGXB3-203ENST00000510472 FAM105AQ9NUU6 356 aa13.01□□□□□ -0.33
HMGXB3-203ENST00000510472 TFIP11Q9UBB9 837 aaKnown RBP13.01□□□□□ -0.33
HMGXB3-203ENST00000510472 MTUS1Q9ULD2 1270 aa13.01□□□□□ -0.33
HMGXB3-203ENST00000510472 GBF1Q92538 1859 aa13□□□□□ -0.33
HMGXB3-203ENST00000510472 TTLL13PA6NNM8 815 aa13□□□□□ -0.33
HMGXB3-203ENST00000510472 TBKBP1A7MCY6 615 aa13□□□□□ -0.33
HMGXB3-203ENST00000510472 MEIS3P2A8K0S8 358 aa13□□□□□ -0.33
HMGXB3-203ENST00000510472 B4GALT5O43286 388 aa13□□□□□ -0.33
HMGXB3-203ENST00000510472 HOXA2O43364 376 aa13□□□□□ -0.33
HMGXB3-203ENST00000510472 HIP1RO75146 1068 aa13□□□□□ -0.33
HMGXB3-203ENST00000510472 BRD1O95696 1058 aa13□□□□□ -0.33
HMGXB3-203ENST00000510472 ARF4P18085 180 aaPredicted RBP13□□□□□ -0.33
HMGXB3-203ENST00000510472 IGFBP4P22692 258 aa13□□□□□ -0.33
HMGXB3-203ENST00000510472 RAB27AP51159 221 aa13□□□□□ -0.33
HMGXB3-203ENST00000510472 KARSQ15046 597 aaKnown RBP13□□□□□ -0.33
HMGXB3-203ENST00000510472 ZRSR1Q15695 479 aaKnown RBP13□□□□□ -0.33
HMGXB3-203ENST00000510472 SPECC1Q5M775 1068 aa13□□□□□ -0.33
HMGXB3-203ENST00000510472 TWF2Q6IBS0 349 aaKnown RBP13□□□□□ -0.33
HMGXB3-203ENST00000510472 SMG8Q8ND04 991 aaKnown RBP13□□□□□ -0.33
HMGXB3-203ENST00000510472 GDPD5Q8WTR4 605 aa13□□□□□ -0.33
HMGXB3-203ENST00000510472 CCDC51Q96ER9 411 aa13□□□□□ -0.33
HMGXB3-203ENST00000510472 ZNF396Q96N95 335 aaPredicted RBP13□□□□□ -0.33
HMGXB3-203ENST00000510472 TIPINQ9BVW5 301 aa13□□□□□ -0.33
HMGXB3-203ENST00000510472 PLVAPQ9BX97 442 aa13□□□□□ -0.33
HMGXB3-203ENST00000510472 CWH43Q9H720 699 aa13□□□□□ -0.33
HMGXB3-203ENST00000510472 C17orf75Q9HAS0 396 aa13□□□□□ -0.33
HMGXB3-203ENST00000510472 TYW1Q9NV66 732 aaKnown RBP13□□□□□ -0.33
HMGXB3-203ENST00000510472 KCND2Q9NZV8 630 aa13□□□□□ -0.33
HMGXB3-203ENST00000510472 RWDD3Q9Y3V2 267 aa13□□□□□ -0.33
HMGXB3-203ENST00000510472 PCDHB2Q9Y5E7 798 aa13□□□□□ -0.33
HMGXB3-203ENST00000510472 EYSQ5T1H1 3165 aa13□□□□□ -0.33
HMGXB3-203ENST00000510472 LRRIQ4A6NIV6 560 aa12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 ACKR2O00590 384 aa12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 PPP6R2O75170 966 aa12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 OFD1O75665 1012 aa12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 YEATS4O95619 227 aa12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 PLCG1P19174 1290 aa12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 NCLP19338 710 aaKnown RBP12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 DDIT3P35638 169 aa12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 CAMK1Q14012 370 aa12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 PPP2R5AQ15172 486 aa12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 PAN2Q504Q3 1202 aaKnown RBP12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 NAALADL2Q58DX5 795 aa12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 ATL3Q6DD88 541 aa12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 AGMOQ6ZNB7 445 aa12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 KRI1Q8N9T8 703 aaKnown RBP12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 RSPH1Q8WYR4 309 aa12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 SYMPKQ92797 1274 aaKnown RBP12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 KCNN1Q92952 543 aa12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 P2RX5Q93086 422 aa12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 CALML4Q96GE6 196 aa12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 PRIMPOLQ96LW4 560 aa12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 EIF2AQ9BY44 585 aaKnown RBP12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 C2orf40Q9H1Z8 148 aa12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 PRMT7Q9NVM4 692 aaPredicted RBP12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 ARHGAP28Q9P2N2 729 aa12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 HCSTQ9UBK5 93 aa12.99□□□□□ -0.33
HMGXB3-203ENST00000510472 PLAGL2Q9UPG8 496 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms