RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 LRRC8CQ8TDW0 803 aa16■□□□□ 0.15
USP38-202ENST00000510377 NACC1Q96RE7 527 aa16■□□□□ 0.15
USP38-202ENST00000510377 NOD2Q9HC29 1040 aa16■□□□□ 0.15
USP38-202ENST00000510377 CNOT8Q9UFF9 292 aaKnown RBP16■□□□□ 0.15
USP38-202ENST00000510377 PCDHGC5Q9Y5F6 944 aa16■□□□□ 0.15
USP38-202ENST00000510377 GRIN2DO15399 1336 aa16■□□□□ 0.15
USP38-202ENST00000510377 ESYT2A0FGR8 921 aa16■□□□□ 0.15
USP38-202ENST00000510377 FAM187AA6NFU0 413 aa16■□□□□ 0.15
USP38-202ENST00000510377 DCDC2CA8MYV0 355 aa16■□□□□ 0.15
USP38-202ENST00000510377 HSPA6P17066 643 aa16■□□□□ 0.15
USP38-202ENST00000510377 CHRNA3P32297 505 aa16■□□□□ 0.15
USP38-202ENST00000510377 MUM1Q2TAK8 710 aa16■□□□□ 0.15
USP38-202ENST00000510377 TRPM8Q7Z2W7 1104 aa16■□□□□ 0.15
USP38-202ENST00000510377 TMC3Q7Z5M5 1100 aa16■□□□□ 0.15
USP38-202ENST00000510377 ZNF564Q8TBZ8 553 aaPredicted RBP16■□□□□ 0.15
USP38-202ENST00000510377 C9orf72Q96LT7 481 aa16■□□□□ 0.15
USP38-202ENST00000510377 IKZF4Q9H2S9 585 aa16■□□□□ 0.15
USP38-202ENST00000510377 GEMIN8Q9NWZ8 242 aaKnown RBP16■□□□□ 0.15
USP38-202ENST00000510377 STK24Q9Y6E0 443 aa16■□□□□ 0.15
USP38-202ENST00000510377 F5H6K3 240 aa15.99■□□□□ 0.15
USP38-202ENST00000510377 CYP26A1O43174 497 aa15.99■□□□□ 0.15
USP38-202ENST00000510377 GH2P01242 217 aa15.99■□□□□ 0.15
USP38-202ENST00000510377 COMTP21964 271 aa15.99■□□□□ 0.15
USP38-202ENST00000510377 SCP2P22307 547 aa15.99■□□□□ 0.15
USP38-202ENST00000510377 KLRC3Q07444 240 aa15.99■□□□□ 0.15
USP38-202ENST00000510377 ACTRT1Q8TDG2 376 aa15.99■□□□□ 0.15
USP38-202ENST00000510377 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.99■□□□□ 0.15
USP38-202ENST00000510377 POMGNT1Q8WZA1 660 aa15.99■□□□□ 0.15
USP38-202ENST00000510377 NT5C1BQ96P26 610 aa15.99■□□□□ 0.15
USP38-202ENST00000510377 TGS1Q96RS0 853 aaKnown RBP15.99■□□□□ 0.15
USP38-202ENST00000510377 AGPAT1Q99943 283 aa15.99■□□□□ 0.15
USP38-202ENST00000510377 IMPG2Q9BZV3 1241 aa15.99■□□□□ 0.15
USP38-202ENST00000510377 AIPL1Q9NZN9 384 aa15.99■□□□□ 0.15
USP38-202ENST00000510377 EXOC1LA0A1B0GW35 172 aa15.99■□□□□ 0.15
USP38-202ENST00000510377 DDX3XO00571 662 aaKnown RBP eCLIP15.99■□□□□ 0.152e-7■■■■■ 26.8
USP38-202ENST00000510377 SKAP2O75563 359 aaPredicted RBP15.99■□□□□ 0.15
USP38-202ENST00000510377 ERFP50548 548 aa15.99■□□□□ 0.15
USP38-202ENST00000510377 ANKRD20A8PQ5CZ79 823 aa15.99■□□□□ 0.15
USP38-202ENST00000510377 MTMR9Q96QG7 549 aa15.99■□□□□ 0.15
USP38-202ENST00000510377 TRIM6Q9C030 488 aaPredicted RBP15.99■□□□□ 0.15
USP38-202ENST00000510377 TPX2Q9ULW0 747 aaKnown RBP15.99■□□□□ 0.15
USP38-202ENST00000510377 MIF4GDA9UHW6 222 aaKnown RBP15.99■□□□□ 0.15
USP38-202ENST00000510377 RASA4BC9J798 803 aa15.99■□□□□ 0.15
USP38-202ENST00000510377 RASA4O43374 803 aa15.99■□□□□ 0.15
USP38-202ENST00000510377 CA4P22748 312 aa15.99■□□□□ 0.15
USP38-202ENST00000510377 NSFP46459 744 aaKnown RBP15.99■□□□□ 0.15
USP38-202ENST00000510377 KYNUQ16719 465 aa15.99■□□□□ 0.15
USP38-202ENST00000510377 WDR78Q5VTH9 848 aa15.99■□□□□ 0.15
USP38-202ENST00000510377 ZKSCAN4Q969J2 545 aaPredicted RBP15.99■□□□□ 0.15
USP38-202ENST00000510377 STK33Q9BYT3 514 aa15.99■□□□□ 0.15
USP38-202ENST00000510377 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.99■□□□□ 0.15
USP38-202ENST00000510377 FSBPO95073 299 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 SHBGP04278 402 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 MFAP3P55082 362 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 MTM1Q13496 603 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 COG2Q14746 738 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 EPC2Q52LR7 807 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 ARHGEF18Q6ZSZ5 1173 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 PASD1Q8IV76 773 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 ELMO3Q96BJ8 720 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 SAAL1Q96ER3 474 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 L3MBTL1Q9Y468 752 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.98■□□□□ 0.15
USP38-202ENST00000510377 CAMTA1Q9Y6Y1 1673 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 BCL9O00512 1426 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 TNS2Q63HR2 1409 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 TMEM120BA0PK00 339 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 TESPA1A2RU30 521 aaPredicted RBP15.98■□□□□ 0.15
USP38-202ENST00000510377 FOXN3O00409 490 aaPredicted RBP15.98■□□□□ 0.15
USP38-202ENST00000510377 ALAS1P13196 640 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 PEX3P56589 373 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 TSNAXIP1Q2TAA8 658 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 PRPF38AQ8NAV1 312 aaKnown RBP15.98■□□□□ 0.15
USP38-202ENST00000510377 DNAJC19Q96DA6 116 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 NEUROG2Q9H2A3 272 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 PABPC3Q9H361 631 aaKnown RBP15.98■□□□□ 0.15
USP38-202ENST00000510377 INTUQ9ULD6 942 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 CLRN2A0PK11 232 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 PDHA1P08559 390 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 KRT17Q04695 432 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 GIT2Q14161 759 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 C6orf163Q5TEZ5 329 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 SPDL1Q96EA4 605 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 RAB3IPQ96QF0 476 aaPredicted RBP15.98■□□□□ 0.15
USP38-202ENST00000510377 YIPF3Q9GZM5 350 aa15.98■□□□□ 0.15
USP38-202ENST00000510377 TRAPPC3O43617 180 aa15.97■□□□□ 0.15
USP38-202ENST00000510377 DYNLT1P63172 113 aa15.97■□□□□ 0.15
USP38-202ENST00000510377 DHX34Q14147 1143 aaKnown RBP15.97■□□□□ 0.15
USP38-202ENST00000510377 SLC51AQ86UW1 340 aa15.97■□□□□ 0.15
USP38-202ENST00000510377 FUKQ8N0W3 1084 aa15.97■□□□□ 0.15
USP38-202ENST00000510377 PPFIBP2Q8ND30 876 aa15.97■□□□□ 0.15
USP38-202ENST00000510377 CYP2W1Q8TAV3 490 aa15.97■□□□□ 0.15
USP38-202ENST00000510377 NSMCE1Q8WV22 266 aa15.97■□□□□ 0.15
USP38-202ENST00000510377 RTFDC1Q9BY42 306 aaPredicted RBP15.97■□□□□ 0.15
USP38-202ENST00000510377 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.97■□□□□ 0.157e-8■■■■□ 20.8
USP38-202ENST00000510377 C1orf112Q9NSG2 853 aa15.97■□□□□ 0.15
USP38-202ENST00000510377 APEX2Q9UBZ4 518 aa15.97■□□□□ 0.15
USP38-202ENST00000510377 PPIP5K2O43314 1243 aa15.97■□□□□ 0.15
USP38-202ENST00000510377 CDC25CP30307 473 aa15.97■□□□□ 0.15
USP38-202ENST00000510377 SARNPP82979 210 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms