RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 ZC3H14Q6PJT7 736 aaKnown RBP11.65□□□□□ -0.54
MBD4-208ENST00000509828 MIER3Q7Z3K6 550 aa11.65□□□□□ -0.54
MBD4-208ENST00000509828 TMEM173Q86WV6 379 aaPredicted RBP11.65□□□□□ -0.54
MBD4-208ENST00000509828 RHPN2Q8IUC4 686 aa11.65□□□□□ -0.54
MBD4-208ENST00000509828 BICD2Q8TD16 824 aa11.65□□□□□ -0.54
MBD4-208ENST00000509828 CCDC136Q96JN2 1154 aa11.65□□□□□ -0.54
MBD4-208ENST00000509828 YTHDC1Q96MU7 727 aaKnown RBP11.65□□□□□ -0.54
MBD4-208ENST00000509828 FDXACB1Q9BRP7 624 aaPredicted RBP11.65□□□□□ -0.54
MBD4-208ENST00000509828 TEKT3Q9BXF9 490 aa11.65□□□□□ -0.54
MBD4-208ENST00000509828 LSG1Q9H089 658 aaKnown RBP11.65□□□□□ -0.54
MBD4-208ENST00000509828 SUCLA2Q9P2R7 463 aaPredicted RBP11.65□□□□□ -0.54
MBD4-208ENST00000509828 WNT16Q9UBV4 365 aa11.65□□□□□ -0.54
MBD4-208ENST00000509828 BRPF3Q9ULD4 1205 aa11.65□□□□□ -0.54
MBD4-208ENST00000509828 CA14Q9ULX7 337 aa11.65□□□□□ -0.54
MBD4-208ENST00000509828 SSX2IPQ9Y2D8 614 aa11.65□□□□□ -0.54
MBD4-208ENST00000509828 R4GN57 208 aa11.65□□□□□ -0.54
MBD4-208ENST00000509828 RIF1Q5UIP0 2472 aaKnown RBP11.64□□□□□ -0.55
MBD4-208ENST00000509828 CCDC195A0A1B0GUA6 201 aa11.64□□□□□ -0.55
MBD4-208ENST00000509828 NARSO43776 548 aaKnown RBP11.64□□□□□ -0.55
MBD4-208ENST00000509828 OFD1O75665 1012 aa11.64□□□□□ -0.55
MBD4-208ENST00000509828 URODP06132 367 aa11.64□□□□□ -0.55
MBD4-208ENST00000509828 ADH1AP07327 375 aa11.64□□□□□ -0.55
MBD4-208ENST00000509828 CNPP09543 421 aaKnown RBP11.64□□□□□ -0.55
MBD4-208ENST00000509828 PFKFB3Q16875 520 aaPredicted RBP11.64□□□□□ -0.55
MBD4-208ENST00000509828 LRCH2Q5VUJ6 765 aa11.64□□□□□ -0.55
MBD4-208ENST00000509828 DHX32Q7L7V1 743 aaKnown RBP11.64□□□□□ -0.55
MBD4-208ENST00000509828 LINC01465Q8N7H1 131 aa11.64□□□□□ -0.55
MBD4-208ENST00000509828 RSAD2Q8WXG1 361 aa11.64□□□□□ -0.55
MBD4-208ENST00000509828 NLRP4Q96MN2 994 aa11.64□□□□□ -0.55
MBD4-208ENST00000509828 ESYT1Q9BSJ8 1104 aa11.64□□□□□ -0.55
MBD4-208ENST00000509828 MAN1C1Q9NR34 630 aa11.64□□□□□ -0.55
MBD4-208ENST00000509828 FAM105AQ9NUU6 356 aa11.64□□□□□ -0.55
MBD4-208ENST00000509828 KANSL3Q9P2N6 904 aa11.64□□□□□ -0.55
MBD4-208ENST00000509828 DNAJB4Q9UDY4 337 aa11.64□□□□□ -0.55
MBD4-208ENST00000509828 PLXNA3P51805 1871 aa11.63□□□□□ -0.55
MBD4-208ENST00000509828 CFAP54Q96N23 3096 aa11.63□□□□□ -0.55
MBD4-208ENST00000509828 ZNF862O60290 1169 aa11.63□□□□□ -0.55
MBD4-208ENST00000509828 NR1I2O75469 434 aa11.63□□□□□ -0.55
MBD4-208ENST00000509828 ADD1P35611 737 aaKnown RBP11.63□□□□□ -0.55
MBD4-208ENST00000509828 CLCN4P51793 760 aa11.63□□□□□ -0.55
MBD4-208ENST00000509828 FUT2Q10981 343 aa11.63□□□□□ -0.55
MBD4-208ENST00000509828 COL9A3Q14050 684 aaPredicted RBP11.63□□□□□ -0.55
MBD4-208ENST00000509828 NECTIN1Q15223 517 aa11.63□□□□□ -0.55
MBD4-208ENST00000509828 UGCGQ16739 394 aa11.63□□□□□ -0.55
MBD4-208ENST00000509828 XKR3Q5GH77 459 aa11.63□□□□□ -0.55
MBD4-208ENST00000509828 C15orf39Q6ZRI6 1047 aa11.63□□□□□ -0.55
MBD4-208ENST00000509828 ZNF410Q86VK4 478 aa11.63□□□□□ -0.55
MBD4-208ENST00000509828 ZNF280BQ86YH2 543 aa11.63□□□□□ -0.55
MBD4-208ENST00000509828 BCL7CQ8WUZ0 217 aaPredicted RBP11.63□□□□□ -0.55
MBD4-208ENST00000509828 SMG7Q92540 1137 aaKnown RBP11.63□□□□□ -0.55
MBD4-208ENST00000509828 RIT2Q99578 217 aa11.63□□□□□ -0.55
MBD4-208ENST00000509828 JPH2Q9BR39 696 aaPredicted RBP11.63□□□□□ -0.55
MBD4-208ENST00000509828 ZMYND12Q9H0C1 365 aa11.63□□□□□ -0.55
MBD4-208ENST00000509828 TBC1D17Q9HA65 648 aa11.63□□□□□ -0.55
MBD4-208ENST00000509828 SIT1Q9Y3P8 196 aa11.63□□□□□ -0.55
MBD4-208ENST00000509828 PCDHB2Q9Y5E7 798 aa11.63□□□□□ -0.55
MBD4-208ENST00000509828 MYO10Q9HD67 2058 aa11.63□□□□□ -0.55
MBD4-208ENST00000509828 USP34Q70CQ2 3546 aa11.63□□□□□ -0.55
MBD4-208ENST00000509828 EVPLQ92817 2033 aa11.62□□□□□ -0.55
MBD4-208ENST00000509828 ESYT2A0FGR8 921 aa11.62□□□□□ -0.55
MBD4-208ENST00000509828 MSH4O15457 936 aa11.62□□□□□ -0.55
MBD4-208ENST00000509828 GLUD1P00367 558 aa11.62□□□□□ -0.55
MBD4-208ENST00000509828 POMCP01189 267 aa11.62□□□□□ -0.55
MBD4-208ENST00000509828 CDC27P30260 824 aa11.62□□□□□ -0.55
MBD4-208ENST00000509828 OR1G1P47890 313 aa11.62□□□□□ -0.55
MBD4-208ENST00000509828 DRP2Q13474 957 aa11.62□□□□□ -0.55
MBD4-208ENST00000509828 KRT32Q14532 448 aa11.62□□□□□ -0.55
MBD4-208ENST00000509828 PUM1Q14671 1186 aaKnown RBP eCLIP11.62□□□□□ -0.553e-6■■■□□ 17.7
MBD4-208ENST00000509828 SLC44A3Q8N4M1 653 aa11.62□□□□□ -0.55
MBD4-208ENST00000509828 CCDC148Q8NFR7 591 aa11.62□□□□□ -0.55
MBD4-208ENST00000509828 PHKBQ93100 1093 aa11.62□□□□□ -0.55
MBD4-208ENST00000509828 NXPE3Q969Y0 559 aa11.62□□□□□ -0.55
MBD4-208ENST00000509828 RMDN1Q96DB5 314 aa11.62□□□□□ -0.55
MBD4-208ENST00000509828 SH2D3AQ9BRG2 576 aa11.62□□□□□ -0.55
MBD4-208ENST00000509828 TMEM175Q9BSA9 504 aa11.62□□□□□ -0.55
MBD4-208ENST00000509828 TRAIPQ9BWF2 469 aa11.62□□□□□ -0.55
MBD4-208ENST00000509828 SLKQ9H2G2 1235 aaPredicted RBP11.62□□□□□ -0.55
MBD4-208ENST00000509828 UNC45AQ9H3U1 944 aa11.62□□□□□ -0.55
MBD4-208ENST00000509828 RSAD1Q9HA92 442 aa11.62□□□□□ -0.55
MBD4-208ENST00000509828 PRG3Q9Y2Y8 225 aaPredicted RBP11.62□□□□□ -0.55
MBD4-208ENST00000509828 FAM186AA6NE01 2351 aa11.61□□□□□ -0.55
MBD4-208ENST00000509828 MEIS3P2A8K0S8 358 aa11.61□□□□□ -0.55
MBD4-208ENST00000509828 NRP1O14786 923 aa11.61□□□□□ -0.55
MBD4-208ENST00000509828 INPPL1O15357 1258 aa11.61□□□□□ -0.55
MBD4-208ENST00000509828 ZNF623O75123 536 aa11.61□□□□□ -0.55
MBD4-208ENST00000509828 DCNP07585 359 aaKnown RBP11.61□□□□□ -0.55
MBD4-208ENST00000509828 HMGB1P09429 215 aaKnown RBP11.61□□□□□ -0.55
MBD4-208ENST00000509828 SPATA31D3P0C874 917 aa11.61□□□□□ -0.55
MBD4-208ENST00000509828 SRGAP2CP0DJJ0 459 aa11.61□□□□□ -0.55
MBD4-208ENST00000509828 SRFP11831 508 aa11.61□□□□□ -0.55
MBD4-208ENST00000509828 CIITAP33076 1130 aa11.61□□□□□ -0.55
MBD4-208ENST00000509828 GLUD2P49448 558 aa11.61□□□□□ -0.55
MBD4-208ENST00000509828 USP11P51784 963 aa11.61□□□□□ -0.55
MBD4-208ENST00000509828 NLRP5P59047 1200 aa11.61□□□□□ -0.55
MBD4-208ENST00000509828 EXOSC10Q01780 885 aaKnown RBP11.61□□□□□ -0.55
MBD4-208ENST00000509828 NCBP1Q09161 790 aaKnown RBP11.61□□□□□ -0.55
MBD4-208ENST00000509828 CYP26C1Q6V0L0 522 aa11.61□□□□□ -0.55
MBD4-208ENST00000509828 SPATA31D4Q6ZUB0 917 aa11.61□□□□□ -0.55
MBD4-208ENST00000509828 PALB2Q86YC2 1186 aa11.61□□□□□ -0.55
MBD4-208ENST00000509828 KSR1Q8IVT5 923 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms