RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 XRCC6P12956 609 aaKnown RBP eCLIP23.65■■□□□ 1.38
LIN54-208ENST00000509748 PBX3P40426 434 aa23.65■■□□□ 1.38
LIN54-208ENST00000509748 RARRES1P49788 294 aa23.65■■□□□ 1.38
LIN54-208ENST00000509748 ORC2Q13416 577 aaPredicted RBP23.65■■□□□ 1.38
LIN54-208ENST00000509748 NOSTRINQ8IVI9 506 aa23.65■■□□□ 1.38
LIN54-208ENST00000509748 FAM184AQ8NB25 1140 aa23.65■■□□□ 1.38
LIN54-208ENST00000509748 RNF149Q8NC42 400 aa23.65■■□□□ 1.38
LIN54-208ENST00000509748 PIGOQ8TEQ8 1089 aa23.65■■□□□ 1.38
LIN54-208ENST00000509748 LZTS1Q9Y250 596 aa23.65■■□□□ 1.38
LIN54-208ENST00000509748 MED24O75448 989 aa23.64■■□□□ 1.37
LIN54-208ENST00000509748 U2AF2P26368 475 aaKnown RBP eCLIP23.64■■□□□ 1.37
LIN54-208ENST00000509748 ARL2P36404 184 aa23.64■■□□□ 1.37
LIN54-208ENST00000509748 UBXN11Q5T124 520 aa23.64■■□□□ 1.37
LIN54-208ENST00000509748 CATSPER3Q86XQ3 398 aa23.64■■□□□ 1.37
LIN54-208ENST00000509748 EFHBQ8N7U6 833 aa23.64■■□□□ 1.37
LIN54-208ENST00000509748 ASAP3Q8TDY4 903 aa23.64■■□□□ 1.37
LIN54-208ENST00000509748 MRPS27Q92552 414 aaKnown RBP23.64■■□□□ 1.37
LIN54-208ENST00000509748 KHSRPQ92945 711 aaKnown RBP eCLIP23.64■■□□□ 1.37
LIN54-208ENST00000509748 ZNF558Q96NG5 402 aa23.64■■□□□ 1.37
LIN54-208ENST00000509748 TLR9Q9NR96 1032 aa23.64■■□□□ 1.37
LIN54-208ENST00000509748 C5orf42Q9H799 3197 aa23.64■■□□□ 1.37
LIN54-208ENST00000509748 DGAT1O75907 488 aa23.63■■□□□ 1.37
LIN54-208ENST00000509748 CD2BP2O95400 341 aaKnown RBP23.63■■□□□ 1.37
LIN54-208ENST00000509748 OR52Z1P0C646 297 aa23.63■■□□□ 1.37
LIN54-208ENST00000509748 SKIP12755 728 aa23.63■■□□□ 1.37
LIN54-208ENST00000509748 TECP42680 631 aa23.63■■□□□ 1.37
LIN54-208ENST00000509748 NRIP1P48552 1158 aa23.63■■□□□ 1.37
LIN54-208ENST00000509748 TOB1P50616 345 aaPredicted RBP23.63■■□□□ 1.37
LIN54-208ENST00000509748 PTENP60484 403 aa23.63■■□□□ 1.37
LIN54-208ENST00000509748 LONRF3Q496Y0 759 aa23.63■■□□□ 1.37
LIN54-208ENST00000509748 TTC38Q5R3I4 469 aa23.63■■□□□ 1.37
LIN54-208ENST00000509748 MRPL10Q7Z7H8 261 aaKnown RBP23.63■■□□□ 1.37
LIN54-208ENST00000509748 IFNLR1Q8IU57 520 aaPredicted RBP23.63■■□□□ 1.37
LIN54-208ENST00000509748 MSLNLQ96KJ4 702 aa23.63■■□□□ 1.37
LIN54-208ENST00000509748 POLR3CQ9BUI4 534 aaPredicted RBP23.63■■□□□ 1.37
LIN54-208ENST00000509748 TUFT1Q9NNX1 390 aa23.63■■□□□ 1.37
LIN54-208ENST00000509748 CLEC1BQ9P126 229 aa23.63■■□□□ 1.37
LIN54-208ENST00000509748 PCDHB2Q9Y5E7 798 aa23.63■■□□□ 1.37
LIN54-208ENST00000509748 OFD1O75665 1012 aa23.62■■□□□ 1.37
LIN54-208ENST00000509748 GLP2RO95838 553 aa23.62■■□□□ 1.37
LIN54-208ENST00000509748 TRAPPC10P48553 1259 aa23.62■■□□□ 1.37
LIN54-208ENST00000509748 RAB27AP51159 221 aa23.62■■□□□ 1.37
LIN54-208ENST00000509748 POU5F1BQ06416 359 aa23.62■■□□□ 1.37
LIN54-208ENST00000509748 MXD4Q14582 209 aaPredicted RBP23.62■■□□□ 1.37
LIN54-208ENST00000509748 NBR1Q14596 966 aa23.62■■□□□ 1.37
LIN54-208ENST00000509748 RBM23Q86U06 439 aaKnown RBP23.62■■□□□ 1.37
LIN54-208ENST00000509748 SLC39A11Q8N1S5 342 aa23.62■■□□□ 1.37
LIN54-208ENST00000509748 PPP2R3CQ969Q6 453 aa23.62■■□□□ 1.37
LIN54-208ENST00000509748 SPG21Q9NZD8 308 aa23.62■■□□□ 1.37
LIN54-208ENST00000509748 GLRA2P23416 452 aa23.61■■□□□ 1.37
LIN54-208ENST00000509748 CAPSQ13938 189 aa23.61■■□□□ 1.37
LIN54-208ENST00000509748 CLUL1Q15846 466 aa23.61■■□□□ 1.37
LIN54-208ENST00000509748 PDE12Q6L8Q7 609 aaKnown RBP23.61■■□□□ 1.37
LIN54-208ENST00000509748 AGMOQ6ZNB7 445 aa23.61■■□□□ 1.37
LIN54-208ENST00000509748 MICAL1Q8TDZ2 1067 aa23.61■■□□□ 1.37
LIN54-208ENST00000509748 MRPL9Q9BYD2 267 aaKnown RBP23.61■■□□□ 1.37
LIN54-208ENST00000509748 TLE6Q9H808 572 aa23.61■■□□□ 1.37
LIN54-208ENST00000509748 PER2O15055 1255 aa23.6■■□□□ 1.37
LIN54-208ENST00000509748 MBTPS2O43462 519 aa23.6■■□□□ 1.37
LIN54-208ENST00000509748 PPM1AP35813 382 aa23.6■■□□□ 1.37
LIN54-208ENST00000509748 BCAR1P56945 870 aa23.6■■□□□ 1.37
LIN54-208ENST00000509748 AMHR2Q16671 573 aa23.6■■□□□ 1.37
LIN54-208ENST00000509748 GJD3Q8N144 294 aa23.6■■□□□ 1.37
LIN54-208ENST00000509748 VN1R2Q8NFZ6 395 aa23.6■■□□□ 1.37
LIN54-208ENST00000509748 RSPH1Q8WYR4 309 aa23.6■■□□□ 1.37
LIN54-208ENST00000509748 TMX3Q96JJ7 454 aa23.6■■□□□ 1.37
LIN54-208ENST00000509748 EPHX3Q9H6B9 360 aa23.6■■□□□ 1.37
LIN54-208ENST00000509748 TBC1D13Q9NVG8 400 aa23.6■■□□□ 1.37
LIN54-208ENST00000509748 DBR1Q9UK59 544 aaKnown RBP23.6■■□□□ 1.37
LIN54-208ENST00000509748 ST18O60284 1047 aa23.59■■□□□ 1.37
LIN54-208ENST00000509748 B4GALT3O60512 393 aa23.59■■□□□ 1.37
LIN54-208ENST00000509748 TSPAN1O60635 241 aa23.59■■□□□ 1.37
LIN54-208ENST00000509748 EYA4O95677 639 aa23.59■■□□□ 1.37
LIN54-208ENST00000509748 RPA1P27694 616 aa23.59■■□□□ 1.37
LIN54-208ENST00000509748 AFF1P51825 1210 aaKnown RBP23.59■■□□□ 1.37
LIN54-208ENST00000509748 RBM10P98175 930 aaKnown RBP23.59■■□□□ 1.37
LIN54-208ENST00000509748 MBTD1Q05BQ5 628 aa23.59■■□□□ 1.37
LIN54-208ENST00000509748 SMAD2Q15796 467 aaKnown RBP23.59■■□□□ 1.37
LIN54-208ENST00000509748 DUSP6Q16828 381 aa23.59■■□□□ 1.37
LIN54-208ENST00000509748 NOMO2Q5JPE7 1267 aa23.59■■□□□ 1.37
LIN54-208ENST00000509748 GLB1LQ6UWU2 654 aa23.59■■□□□ 1.37
LIN54-208ENST00000509748 SMG8Q8ND04 991 aaKnown RBP23.59■■□□□ 1.37
LIN54-208ENST00000509748 NACC1Q96RE7 527 aa23.59■■□□□ 1.37
LIN54-208ENST00000509748 NRDE2Q9H7Z3 1164 aa23.59■■□□□ 1.37
LIN54-208ENST00000509748 PUF60Q9UHX1 559 aaKnown RBP23.59■■□□□ 1.37
LIN54-208ENST00000509748 CD207Q9UJ71 328 aa23.59■■□□□ 1.37
LIN54-208ENST00000509748 NT5C1B-RDH14C9J2C7 533 aa23.58■■□□□ 1.37
LIN54-208ENST00000509748 USO1O60763 962 aaKnown RBP23.58■■□□□ 1.37
LIN54-208ENST00000509748 FXR2P51116 673 aaKnown RBP eCLIP23.58■■□□□ 1.37
LIN54-208ENST00000509748 ZP2Q05996 745 aa23.58■■□□□ 1.37
LIN54-208ENST00000509748 SMAD4Q13485 552 aaKnown RBP23.58■■□□□ 1.37
LIN54-208ENST00000509748 GNL2Q13823 731 aaKnown RBP23.58■■□□□ 1.37
LIN54-208ENST00000509748 KCNC3Q14003 757 aa23.58■■□□□ 1.37
LIN54-208ENST00000509748 TFDP1Q14186 410 aa23.58■■□□□ 1.37
LIN54-208ENST00000509748 PCBP1Q15365 356 aaKnown RBP eCLIP23.58■■□□□ 1.374e-6■■■□□ 14.8
LIN54-208ENST00000509748 ECM1Q16610 540 aa23.58■■□□□ 1.37
LIN54-208ENST00000509748 POTEGQ6S5H5 508 aa23.58■■□□□ 1.37
LIN54-208ENST00000509748 TMEM173Q86WV6 379 aaPredicted RBP23.58■■□□□ 1.37
LIN54-208ENST00000509748 PGBD4Q96DM1 585 aa23.58■■□□□ 1.37
LIN54-208ENST00000509748 NFKBIZQ9BYH8 718 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms