RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 FAM105AQ9NUU6 356 aa20■□□□□ 0.79
TPM3-220ENST00000509601 MED24O75448 989 aa19.99■□□□□ 0.79
TPM3-220ENST00000509601 PBX3P40426 434 aa19.99■□□□□ 0.79
TPM3-220ENST00000509601 TECP42680 631 aa19.99■□□□□ 0.79
TPM3-220ENST00000509601 RARRES1P49788 294 aa19.99■□□□□ 0.79
TPM3-220ENST00000509601 LONRF3Q496Y0 759 aa19.99■□□□□ 0.79
TPM3-220ENST00000509601 UBXN11Q5T124 520 aa19.99■□□□□ 0.79
TPM3-220ENST00000509601 MRPL10Q7Z7H8 261 aaKnown RBP19.99■□□□□ 0.79
TPM3-220ENST00000509601 RBM23Q86U06 439 aaKnown RBP19.99■□□□□ 0.79
TPM3-220ENST00000509601 NOSTRINQ8IVI9 506 aa19.99■□□□□ 0.79
TPM3-220ENST00000509601 LRRC43Q8N309 656 aa19.99■□□□□ 0.79
TPM3-220ENST00000509601 RNF149Q8NC42 400 aa19.99■□□□□ 0.79
TPM3-220ENST00000509601 MICAL1Q8TDZ2 1067 aa19.99■□□□□ 0.79
TPM3-220ENST00000509601 MRPS27Q92552 414 aaKnown RBP19.99■□□□□ 0.79
TPM3-220ENST00000509601 KHSRPQ92945 711 aaKnown RBP eCLIP19.99■□□□□ 0.79
TPM3-220ENST00000509601 TLR9Q9NR96 1032 aa19.99■□□□□ 0.79
TPM3-220ENST00000509601 AGPAT5Q9NUQ2 364 aa19.99■□□□□ 0.79
TPM3-220ENST00000509601 CLEC1BQ9P126 229 aa19.99■□□□□ 0.79
TPM3-220ENST00000509601 LZTS1Q9Y250 596 aa19.99■□□□□ 0.79
TPM3-220ENST00000509601 TBX10O75333 385 aa19.98■□□□□ 0.79
TPM3-220ENST00000509601 OFD1O75665 1012 aa19.98■□□□□ 0.79
TPM3-220ENST00000509601 DGAT1O75907 488 aa19.98■□□□□ 0.79
TPM3-220ENST00000509601 U2AF2P26368 475 aaKnown RBP eCLIP19.98■□□□□ 0.795e-7■■■■□ 22.9
TPM3-220ENST00000509601 NRIP1P48552 1158 aa19.98■□□□□ 0.79
TPM3-220ENST00000509601 TOB1P50616 345 aaPredicted RBP19.98■□□□□ 0.79
TPM3-220ENST00000509601 PTENP60484 403 aa19.98■□□□□ 0.79
TPM3-220ENST00000509601 ORC2Q13416 577 aaPredicted RBP19.98■□□□□ 0.79
TPM3-220ENST00000509601 EFHBQ8N7U6 833 aa19.98■□□□□ 0.79
TPM3-220ENST00000509601 ASAP3Q8TDY4 903 aa19.98■□□□□ 0.79
TPM3-220ENST00000509601 ZNF558Q96NG5 402 aa19.98■□□□□ 0.79
TPM3-220ENST00000509601 EPHX3Q9H6B9 360 aa19.98■□□□□ 0.79
TPM3-220ENST00000509601 PCDHB2Q9Y5E7 798 aa19.98■□□□□ 0.79
TPM3-220ENST00000509601 C5orf42Q9H799 3197 aa19.98■□□□□ 0.79
TPM3-220ENST00000509601 PER2O15055 1255 aa19.97■□□□□ 0.79
TPM3-220ENST00000509601 CD2BP2O95400 341 aaKnown RBP19.97■□□□□ 0.79
TPM3-220ENST00000509601 SKIP12755 728 aa19.97■□□□□ 0.79
TPM3-220ENST00000509601 POU5F1BQ06416 359 aa19.97■□□□□ 0.79
TPM3-220ENST00000509601 MXD4Q14582 209 aaPredicted RBP19.97■□□□□ 0.79
TPM3-220ENST00000509601 CLUL1Q15846 466 aa19.97■□□□□ 0.79
TPM3-220ENST00000509601 TTC38Q5R3I4 469 aa19.97■□□□□ 0.79
TPM3-220ENST00000509601 IFNLR1Q8IU57 520 aaPredicted RBP19.97■□□□□ 0.79
TPM3-220ENST00000509601 GJD3Q8N144 294 aa19.97■□□□□ 0.79
TPM3-220ENST00000509601 SLC39A11Q8N1S5 342 aa19.97■□□□□ 0.79
TPM3-220ENST00000509601 PPP2R3CQ969Q6 453 aa19.97■□□□□ 0.79
TPM3-220ENST00000509601 MSLNLQ96KJ4 702 aa19.97■□□□□ 0.79
TPM3-220ENST00000509601 POLR3CQ9BUI4 534 aaPredicted RBP19.97■□□□□ 0.79
TPM3-220ENST00000509601 TLE6Q9H808 572 aa19.97■□□□□ 0.79
TPM3-220ENST00000509601 TUFT1Q9NNX1 390 aa19.97■□□□□ 0.79
TPM3-220ENST00000509601 SPG21Q9NZD8 308 aa19.97■□□□□ 0.79
TPM3-220ENST00000509601 MBTPS2O43462 519 aa19.96■□□□□ 0.79
TPM3-220ENST00000509601 GLP2RO95838 553 aa19.96■□□□□ 0.79
TPM3-220ENST00000509601 OR52Z1P0C646 297 aa19.96■□□□□ 0.79
TPM3-220ENST00000509601 GLRA2P23416 452 aa19.96■□□□□ 0.79
TPM3-220ENST00000509601 TRAPPC10P48553 1259 aa19.96■□□□□ 0.79
TPM3-220ENST00000509601 RAB27AP51159 221 aa19.96■□□□□ 0.79
TPM3-220ENST00000509601 NBR1Q14596 966 aa19.96■□□□□ 0.79
TPM3-220ENST00000509601 PDE12Q6L8Q7 609 aaKnown RBP19.96■□□□□ 0.79
TPM3-220ENST00000509601 AGMOQ6ZNB7 445 aa19.96■□□□□ 0.79
TPM3-220ENST00000509601 PUF60Q9UHX1 559 aaKnown RBP19.96■□□□□ 0.79
TPM3-220ENST00000509601 ARID2Q68CP9 1835 aa19.95■□□□□ 0.78
TPM3-220ENST00000509601 NT5C1B-RDH14C9J2C7 533 aa19.95■□□□□ 0.78
TPM3-220ENST00000509601 RPA1P27694 616 aa19.95■□□□□ 0.78
TPM3-220ENST00000509601 BCAR1P56945 870 aa19.95■□□□□ 0.78
TPM3-220ENST00000509601 CAPSQ13938 189 aa19.95■□□□□ 0.78
TPM3-220ENST00000509601 AMHR2Q16671 573 aa19.95■□□□□ 0.78
TPM3-220ENST00000509601 VN1R2Q8NFZ6 395 aa19.95■□□□□ 0.78
TPM3-220ENST00000509601 TMX3Q96JJ7 454 aa19.95■□□□□ 0.78
TPM3-220ENST00000509601 NACC1Q96RE7 527 aa19.95■□□□□ 0.78
TPM3-220ENST00000509601 MRPL9Q9BYD2 267 aaKnown RBP19.95■□□□□ 0.78
TPM3-220ENST00000509601 NRDE2Q9H7Z3 1164 aa19.95■□□□□ 0.78
TPM3-220ENST00000509601 TBC1D13Q9NVG8 400 aa19.95■□□□□ 0.78
TPM3-220ENST00000509601 DBR1Q9UK59 544 aaKnown RBP19.95■□□□□ 0.78
TPM3-220ENST00000509601 C19orf67A6NJJ6 358 aa19.94■□□□□ 0.78
TPM3-220ENST00000509601 HIDE1A8MVS5 230 aa19.94■□□□□ 0.78
TPM3-220ENST00000509601 ST18O60284 1047 aa19.94■□□□□ 0.78
TPM3-220ENST00000509601 TSPAN1O60635 241 aa19.94■□□□□ 0.78
TPM3-220ENST00000509601 EYA4O95677 639 aa19.94■□□□□ 0.78
TPM3-220ENST00000509601 PPM1AP35813 382 aa19.94■□□□□ 0.78
TPM3-220ENST00000509601 AFF1P51825 1210 aaKnown RBP19.94■□□□□ 0.78
TPM3-220ENST00000509601 RBM10P98175 930 aaKnown RBP19.94■□□□□ 0.78
TPM3-220ENST00000509601 KRT17Q04695 432 aa19.94■□□□□ 0.78
TPM3-220ENST00000509601 MBTD1Q05BQ5 628 aa19.94■□□□□ 0.78
TPM3-220ENST00000509601 KCNC3Q14003 757 aa19.94■□□□□ 0.78
TPM3-220ENST00000509601 SMAD2Q15796 467 aaKnown RBP19.94■□□□□ 0.78
TPM3-220ENST00000509601 ECM1Q16610 540 aa19.94■□□□□ 0.78
TPM3-220ENST00000509601 DUSP6Q16828 381 aa19.94■□□□□ 0.78
TPM3-220ENST00000509601 NOMO2Q5JPE7 1267 aa19.94■□□□□ 0.78
TPM3-220ENST00000509601 SMG8Q8ND04 991 aaKnown RBP19.94■□□□□ 0.78
TPM3-220ENST00000509601 RSPH1Q8WYR4 309 aa19.94■□□□□ 0.78
TPM3-220ENST00000509601 PGBD4Q96DM1 585 aa19.94■□□□□ 0.78
TPM3-220ENST00000509601 GPRC5CQ9NQ84 441 aa19.94■□□□□ 0.78
TPM3-220ENST00000509601 CD207Q9UJ71 328 aa19.94■□□□□ 0.78
TPM3-220ENST00000509601 B4GALT3O60512 393 aa19.93■□□□□ 0.78
TPM3-220ENST00000509601 GALTP07902 379 aa19.93■□□□□ 0.78
TPM3-220ENST00000509601 NCLP19338 710 aaKnown RBP19.93■□□□□ 0.78
TPM3-220ENST00000509601 ALDH7A1P49419 539 aaKnown RBP19.93■□□□□ 0.78
TPM3-220ENST00000509601 NDUFV1P49821 464 aa19.93■□□□□ 0.78
TPM3-220ENST00000509601 FXR2P51116 673 aaKnown RBP eCLIP19.93■□□□□ 0.782e-6■■■□□ 15.5
TPM3-220ENST00000509601 ZP2Q05996 745 aa19.93■□□□□ 0.78
TPM3-220ENST00000509601 COASYQ13057 564 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms