RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 HOXD11P31277 338 aaPredicted RBP16.32■□□□□ 0.2
HMGCL-208ENST00000509389 CDC42EP1Q00587 391 aa16.32■□□□□ 0.2
HMGCL-208ENST00000509389 KRT25Q7Z3Z0 450 aa16.32■□□□□ 0.2
HMGCL-208ENST00000509389 DIS3L2Q8IYB7 885 aaKnown RBP16.32■□□□□ 0.2
HMGCL-208ENST00000509389 TCF25Q9BQ70 676 aa16.32■□□□□ 0.2
HMGCL-208ENST00000509389 GCOM2Q9BZD3 368 aaPredicted RBP16.32■□□□□ 0.2
HMGCL-208ENST00000509389 TECTAO75443 2155 aa16.32■□□□□ 0.2
HMGCL-208ENST00000509389 A0A087WZ62 844 aa16.31■□□□□ 0.2
HMGCL-208ENST00000509389 FSD2A1L4K1 749 aa16.31■□□□□ 0.2
HMGCL-208ENST00000509389 LOC730098B7Z3J9 87 aa16.31■□□□□ 0.2
HMGCL-208ENST00000509389 SLC37A4O43826 429 aa16.31■□□□□ 0.2
HMGCL-208ENST00000509389 MAFO75444 373 aaPredicted RBP16.31■□□□□ 0.2
HMGCL-208ENST00000509389 PPM1AP35813 382 aa16.31■□□□□ 0.2
HMGCL-208ENST00000509389 DNM2P50570 870 aa16.31■□□□□ 0.2
HMGCL-208ENST00000509389 FOSBP53539 338 aa16.31■□□□□ 0.2
HMGCL-208ENST00000509389 PSMC5P62195 406 aa16.31■□□□□ 0.2
HMGCL-208ENST00000509389 KRT85P78386 507 aa16.31■□□□□ 0.2
HMGCL-208ENST00000509389 KCNC3Q14003 757 aa16.31■□□□□ 0.2
HMGCL-208ENST00000509389 LETM2Q2VYF4 491 aa16.31■□□□□ 0.2
HMGCL-208ENST00000509389 FAM173BQ6P4H8 233 aa16.31■□□□□ 0.2
HMGCL-208ENST00000509389 NOSTRINQ8IVI9 506 aa16.31■□□□□ 0.2
HMGCL-208ENST00000509389 HELQQ8TDG4 1101 aa16.31■□□□□ 0.2
HMGCL-208ENST00000509389 FDXACB1Q9BRP7 624 aaPredicted RBP16.31■□□□□ 0.2
HMGCL-208ENST00000509389 NGRNQ9NPE2 291 aaKnown RBP16.31■□□□□ 0.2
HMGCL-208ENST00000509389 ENTPD7Q9NQZ7 604 aa16.31■□□□□ 0.2
HMGCL-208ENST00000509389 CHST12Q9NRB3 414 aa16.31■□□□□ 0.2
HMGCL-208ENST00000509389 DACT1Q9NYF0 836 aa16.31■□□□□ 0.2
HMGCL-208ENST00000509389 SPG21Q9NZD8 308 aa16.31■□□□□ 0.2
HMGCL-208ENST00000509389 SUCLA2Q9P2R7 463 aaPredicted RBP16.31■□□□□ 0.2
HMGCL-208ENST00000509389 MORC2Q9Y6X9 1032 aaPredicted RBP16.31■□□□□ 0.2
HMGCL-208ENST00000509389 HIDE1A8MVS5 230 aa16.3■□□□□ 0.2
HMGCL-208ENST00000509389 GOLGA6L22H0YM25 854 aa16.3■□□□□ 0.2
HMGCL-208ENST00000509389 EML1O00423 815 aa16.3■□□□□ 0.2
HMGCL-208ENST00000509389 KRT17Q04695 432 aa16.3■□□□□ 0.2
HMGCL-208ENST00000509389 CBX2Q14781 532 aaPredicted RBP16.3■□□□□ 0.2
HMGCL-208ENST00000509389 MCTP1Q6DN14 999 aa16.3■□□□□ 0.2
HMGCL-208ENST00000509389 TMEM184AQ6ZMB5 413 aa16.3■□□□□ 0.2
HMGCL-208ENST00000509389 HFE2Q6ZVN8 426 aa16.3■□□□□ 0.2
HMGCL-208ENST00000509389 ANO5Q75V66 913 aa16.3■□□□□ 0.2
HMGCL-208ENST00000509389 SLC39A11Q8N1S5 342 aa16.3■□□□□ 0.2
HMGCL-208ENST00000509389 SUSD6Q92537 303 aa16.3■□□□□ 0.2
HMGCL-208ENST00000509389 PHF7Q9BWX1 381 aaPredicted RBP16.3■□□□□ 0.2
HMGCL-208ENST00000509389 VAV3Q9UKW4 847 aa16.3■□□□□ 0.2
HMGCL-208ENST00000509389 ZNF318Q5VUA4 2279 aa16.3■□□□□ 0.2
HMGCL-208ENST00000509389 CCDC194A0A1B0GVG4 234 aa16.29■□□□□ 0.2
HMGCL-208ENST00000509389 BTBD18B2RXH4 712 aa16.29■□□□□ 0.2
HMGCL-208ENST00000509389 SFPQP23246 707 aaKnown RBP eCLIP16.29■□□□□ 0.2
HMGCL-208ENST00000509389 KRT2P35908 639 aa16.29■□□□□ 0.2
HMGCL-208ENST00000509389 PHKA2P46019 1235 aa16.29■□□□□ 0.2
HMGCL-208ENST00000509389 NASPP49321 788 aaPredicted RBP16.29■□□□□ 0.2
HMGCL-208ENST00000509389 SAFBQ15424 915 aaKnown RBP eCLIP16.29■□□□□ 0.2
HMGCL-208ENST00000509389 PLA2G4FQ68DD2 849 aa16.29■□□□□ 0.2
HMGCL-208ENST00000509389 ANKRD54Q6NXT1 300 aa16.29■□□□□ 0.2
HMGCL-208ENST00000509389 TMC7Q7Z402 723 aa16.29■□□□□ 0.2
HMGCL-208ENST00000509389 ZNF410Q86VK4 478 aa16.29■□□□□ 0.2
HMGCL-208ENST00000509389 RHPN2Q8IUC4 686 aa16.29■□□□□ 0.2
HMGCL-208ENST00000509389 KSR1Q8IVT5 923 aa16.29■□□□□ 0.2
HMGCL-208ENST00000509389 EDAQ92838 391 aa16.29■□□□□ 0.2
HMGCL-208ENST00000509389 FAM20AQ96MK3 541 aa16.29■□□□□ 0.2
HMGCL-208ENST00000509389 TRAIPQ9BWF2 469 aa16.29■□□□□ 0.2
HMGCL-208ENST00000509389 INO80BQ9C086 356 aaPredicted RBP16.29■□□□□ 0.2
HMGCL-208ENST00000509389 SCAND2PQ9GZW5 306 aaPredicted RBP16.29■□□□□ 0.2
HMGCL-208ENST00000509389 S1PR5Q9H228 398 aa16.29■□□□□ 0.2
HMGCL-208ENST00000509389 KCNMB3Q9NPA1 279 aa16.29■□□□□ 0.2
HMGCL-208ENST00000509389 TRIOO75962 3097 aa16.29■□□□□ 0.2
HMGCL-208ENST00000509389 SRGAP2BP0DMP2 458 aa16.28■□□□□ 0.2
HMGCL-208ENST00000509389 TECP42680 631 aa16.28■□□□□ 0.2
HMGCL-208ENST00000509389 QARSP47897 775 aaKnown RBP16.28■□□□□ 0.2
HMGCL-208ENST00000509389 NPEPPSP55786 919 aa16.28■□□□□ 0.2
HMGCL-208ENST00000509389 PPP2R5CQ13362 524 aa16.28■□□□□ 0.2
HMGCL-208ENST00000509389 PPP4R3AQ6IN85 833 aa16.28■□□□□ 0.2
HMGCL-208ENST00000509389 LLGL2Q6P1M3 1020 aa16.28■□□□□ 0.2
HMGCL-208ENST00000509389 SYCE2Q6PIF2 218 aa16.28■□□□□ 0.2
HMGCL-208ENST00000509389 NEK8Q86SG6 692 aa16.28■□□□□ 0.2
HMGCL-208ENST00000509389 OXER1Q8TDS5 423 aa16.28■□□□□ 0.2
HMGCL-208ENST00000509389 RPGRIP1Q96KN7 1286 aa16.28■□□□□ 0.2
HMGCL-208ENST00000509389 USP28Q96RU2 1077 aa16.28■□□□□ 0.2
HMGCL-208ENST00000509389 JPH2Q9BR39 696 aaPredicted RBP16.28■□□□□ 0.2
HMGCL-208ENST00000509389 MRPL9Q9BYD2 267 aaKnown RBP16.28■□□□□ 0.2
HMGCL-208ENST00000509389 CYP26B1Q9NR63 512 aa16.28■□□□□ 0.2
HMGCL-208ENST00000509389 PIEZO1Q92508 2521 aa16.28■□□□□ 0.2
HMGCL-208ENST00000509389 NT5C1B-RDH14C9J2C7 533 aa16.27■□□□□ 0.2
HMGCL-208ENST00000509389 YEATS4O95619 227 aa16.27■□□□□ 0.2
HMGCL-208ENST00000509389 GCFC2P16383 781 aaKnown RBP16.27■□□□□ 0.2
HMGCL-208ENST00000509389 BCAR1P56945 870 aa16.27■□□□□ 0.2
HMGCL-208ENST00000509389 NR5A1Q13285 461 aa16.27■□□□□ 0.2
HMGCL-208ENST00000509389 TWF2Q6IBS0 349 aaKnown RBP16.27■□□□□ 0.2
HMGCL-208ENST00000509389 MRPL43Q8N983 215 aaKnown RBP16.27■□□□□ 0.2
HMGCL-208ENST00000509389 ZNF579Q8NAF0 562 aaKnown RBP16.27■□□□□ 0.2
HMGCL-208ENST00000509389 LEO1Q8WVC0 666 aaPredicted RBP16.27■□□□□ 0.2
HMGCL-208ENST00000509389 LPPQ93052 612 aa16.27■□□□□ 0.2
HMGCL-208ENST00000509389 NLRP4Q96MN2 994 aa16.27■□□□□ 0.2
HMGCL-208ENST00000509389 ZNF396Q96N95 335 aaPredicted RBP16.27■□□□□ 0.2
HMGCL-208ENST00000509389 APOL5Q9BWW9 433 aa16.27■□□□□ 0.2
HMGCL-208ENST00000509389 WRAP73Q9P2S5 460 aaPredicted RBP16.27■□□□□ 0.2
HMGCL-208ENST00000509389 RCOR1Q9UKL0 485 aa16.27■□□□□ 0.2
HMGCL-208ENST00000509389 CFAP45Q9UL16 551 aa16.27■□□□□ 0.2
HMGCL-208ENST00000509389 PIN4Q9Y237 131 aaKnown RBP16.27■□□□□ 0.2
HMGCL-208ENST00000509389 C2orf71A6NGG8 1288 aa16.26■□□□□ 0.19
HMGCL-208ENST00000509389 CCNT1O60563 726 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms