RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 NEK9Q8TD19 979 aa9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 SNX29Q8TEQ0 813 aa9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 TCP11Q8WWU5 503 aa9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 PRPF31Q8WWY3 499 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 MTRQ99707 1265 aa9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 PLVAPQ9BX97 442 aa9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 DHX33Q9H6R0 707 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 TUFT1Q9NNX1 390 aa9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 GPRC5CQ9NQ84 441 aa9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 DDX19AQ9NUU7 478 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 TMEM161AQ9NX61 479 aa9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 DACT1Q9NYF0 836 aa9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 LRWD1Q9UFC0 647 aa9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 PIN4Q9Y237 131 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 PCDHB12Q9Y5F1 795 aa9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 COL4A3BPQ9Y5P4 624 aa9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 PRRC2BQ5JSZ5 2229 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-213ENST00000509357 C5orf67F2Z3F1 127 aa9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 SPTLC2O15270 562 aa9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 GRM6O15303 877 aa9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 ASAP2O43150 1006 aa9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 PPP6R2O75170 966 aa9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 EDN1P05305 212 aa9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 FGFR1P11362 822 aa9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 PLCG1P19174 1290 aa9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 CCT6AP40227 531 aaKnown RBP9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 SLC12A3P55017 1021 aa9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 MAPK7Q13164 816 aa9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 DSC3Q14574 896 aa9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 E2F4Q16254 413 aa9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 ARSHQ5FYA8 562 aa9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 THNSL1Q8IYQ7 743 aa9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 DAW1Q8N136 415 aa9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 MICAL1Q8TDZ2 1067 aa9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 BSNDQ8WZ55 320 aa9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 CLP1Q92989 425 aaKnown RBP9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 IPO9Q96P70 1041 aaKnown RBP9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 RUSC1Q9BVN2 902 aa9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 LMAN2LQ9H0V9 348 aa9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 GOLPH3LQ9H4A5 285 aa9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 NSUN3Q9H649 340 aaKnown RBP9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 ELAC1Q9H777 363 aaKnown RBP9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 RC3H2Q9HBD1 1191 aaKnown RBP9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 ALG13Q9NP73 1137 aaKnown RBP9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 CHST12Q9NRB3 414 aa9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 TYW1Q9NV66 732 aaKnown RBP9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 KIAA1024Q9UPX6 916 aa9.71□□□□□ -0.86
PDLIM5-213ENST00000509357 CUL9Q8IWT3 2517 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 NPHP3-ACAD11A0A0J9YXS1 232 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 A0A0U1RQF3 1178 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 GAS2O43903 313 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 SKIP12755 728 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 KCNA5P22460 613 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 PHKA2P46019 1235 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 KCNQ1P51787 676 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 FAM189BP81408 668 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 NCBP1Q09161 790 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 LAMTOR4Q0VGL1 99 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 TFDP1Q14186 410 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 MXD4Q14582 209 aaPredicted RBP9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 STK38Q15208 465 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 LONRF3Q496Y0 759 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 TCEAL5Q5H9L2 206 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 MAEAQ7L5Y9 396 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 CABP7Q86V35 215 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 ECHDC2Q86YB7 292 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 CRIPAKQ8N1N5 446 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 KRI1Q8N9T8 703 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 KLHL23Q8NBE8 558 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 RNF149Q8NC42 400 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 ASAP3Q8TDY4 903 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 ADAMTS19Q8TE59 1207 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 PPP2R3CQ969Q6 453 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 UHRF1Q96T88 793 aaPredicted RBP9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 CCSER1Q9C0I3 900 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 TMEM117Q9H0C3 514 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 IGFLR1Q9H665 355 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 UBE2ZQ9H832 354 aaPredicted RBP9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 ANKEF1Q9NU02 776 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 PLAGL2Q9UPG8 496 aa9.7□□□□□ -0.86
PDLIM5-213ENST00000509357 TRANK1O15050 2925 aa9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 XIRP2A4UGR9 3374 aa9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 INO80B-WBP1J3KQ70 363 aa9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 NCK2O43639 380 aa9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 USO1O60763 962 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 GADD45BO75293 160 aaPredicted RBP9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 DGAT1O75907 488 aa9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 ERLIN2O94905 339 aa9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 EOMESO95936 686 aa9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 ITGB1P05556 798 aa9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 XRCC6P12956 609 aaKnown RBP eCLIP9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 LAG3P18627 525 aa9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 LONP1P36776 959 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 NUCB2P80303 420 aa9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 MCM6Q14566 821 aa9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 RESP18Q5W5W9 173 aa9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 HAUS3Q68CZ6 603 aa9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 SRGAP1Q7Z6B7 1085 aa9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 LRRC43Q8N309 656 aa9.69□□□□□ -0.86
PDLIM5-213ENST00000509357 HELQQ8TDG4 1101 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms