RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 PCBP1Q15365 356 aaKnown RBP eCLIP17.91■□□□□ 0.46
PDLIM5-212ENST00000509333 CLLU1OSQ5K130 101 aa17.91■□□□□ 0.46
PDLIM5-212ENST00000509333 UBXN11Q5T124 520 aa17.91■□□□□ 0.46
PDLIM5-212ENST00000509333 TWF2Q6IBS0 349 aaKnown RBP17.91■□□□□ 0.46
PDLIM5-212ENST00000509333 PNMA5Q96PV4 448 aa17.91■□□□□ 0.46
PDLIM5-212ENST00000509333 C11orf84Q9BUA3 381 aaPredicted RBP17.91■□□□□ 0.46
PDLIM5-212ENST00000509333 FAM105AQ9NUU6 356 aa17.91■□□□□ 0.46
PDLIM5-212ENST00000509333 MTMR6Q9Y217 621 aa17.91■□□□□ 0.46
PDLIM5-212ENST00000509333 PIN4Q9Y237 131 aaKnown RBP17.91■□□□□ 0.46
PDLIM5-212ENST00000509333 VWA3AA6NCI4 1184 aa17.9■□□□□ 0.46
PDLIM5-212ENST00000509333 EYA4O95677 639 aa17.9■□□□□ 0.46
PDLIM5-212ENST00000509333 SKIP12755 728 aa17.9■□□□□ 0.46
PDLIM5-212ENST00000509333 MBTD1Q05BQ5 628 aa17.9■□□□□ 0.46
PDLIM5-212ENST00000509333 RESTQ13127 1097 aa17.9■□□□□ 0.46
PDLIM5-212ENST00000509333 SF3A1Q15459 793 aaKnown RBP17.9■□□□□ 0.46
PDLIM5-212ENST00000509333 AMHR2Q16671 573 aa17.9■□□□□ 0.46
PDLIM5-212ENST00000509333 PTPROQ16827 1216 aa17.9■□□□□ 0.46
PDLIM5-212ENST00000509333 HYIQ5T013 277 aa17.9■□□□□ 0.46
PDLIM5-212ENST00000509333 KCNK18Q7Z418 384 aa17.9■□□□□ 0.46
PDLIM5-212ENST00000509333 KLHL23Q8NBE8 558 aa17.9■□□□□ 0.46
PDLIM5-212ENST00000509333 RNF169Q8NCN4 708 aa17.9■□□□□ 0.46
PDLIM5-212ENST00000509333 LMAN2LQ9H0V9 348 aa17.9■□□□□ 0.46
PDLIM5-212ENST00000509333 ALG13Q9NP73 1137 aaKnown RBP17.9■□□□□ 0.46
PDLIM5-212ENST00000509333 PCDHB2Q9Y5E7 798 aa17.9■□□□□ 0.46
PDLIM5-212ENST00000509333 ITGB1P05556 798 aa17.89■□□□□ 0.45
PDLIM5-212ENST00000509333 DNAJB1P25685 340 aa17.89■□□□□ 0.45
PDLIM5-212ENST00000509333 PTPAQ15257 358 aa17.89■□□□□ 0.45
PDLIM5-212ENST00000509333 FAM173BQ6P4H8 233 aa17.89■□□□□ 0.45
PDLIM5-212ENST00000509333 KCTD17Q8N5Z5 321 aa17.89■□□□□ 0.45
PDLIM5-212ENST00000509333 ATXN2LQ8WWM7 1075 aaKnown RBP17.89■□□□□ 0.45
PDLIM5-212ENST00000509333 BSNDQ8WZ55 320 aa17.89■□□□□ 0.45
PDLIM5-212ENST00000509333 LPPQ93052 612 aa17.89■□□□□ 0.45
PDLIM5-212ENST00000509333 FZD8Q9H461 694 aa17.89■□□□□ 0.45
PDLIM5-212ENST00000509333 HCSTQ9UBK5 93 aa17.89■□□□□ 0.45
PDLIM5-212ENST00000509333 CLIC4Q9Y696 253 aa17.89■□□□□ 0.45
PDLIM5-212ENST00000509333 MEIS3P2A8K0S8 358 aa17.88■□□□□ 0.45
PDLIM5-212ENST00000509333 INO80B-WBP1J3KQ70 363 aa17.88■□□□□ 0.45
PDLIM5-212ENST00000509333 STX6O43752 255 aa17.88■□□□□ 0.45
PDLIM5-212ENST00000509333 TSPAN1O60635 241 aa17.88■□□□□ 0.45
PDLIM5-212ENST00000509333 OFD1O75665 1012 aa17.88■□□□□ 0.45
PDLIM5-212ENST00000509333 BMP15O95972 392 aa17.88■□□□□ 0.45
PDLIM5-212ENST00000509333 AXLP30530 894 aa17.88■□□□□ 0.45
PDLIM5-212ENST00000509333 HOXD11P31277 338 aaPredicted RBP17.88■□□□□ 0.45
PDLIM5-212ENST00000509333 RINT1Q6NUQ1 792 aa17.88■□□□□ 0.45
PDLIM5-212ENST00000509333 C1orf186Q6ZWK4 172 aa17.88■□□□□ 0.45
PDLIM5-212ENST00000509333 HELQQ8TDG4 1101 aa17.88■□□□□ 0.45
PDLIM5-212ENST00000509333 AAASQ9NRG9 546 aa17.88■□□□□ 0.45
PDLIM5-212ENST00000509333 PCDHB12Q9Y5F1 795 aa17.88■□□□□ 0.45
PDLIM5-212ENST00000509333 REV3LO60673 3130 aa17.88■□□□□ 0.45
PDLIM5-212ENST00000509333 UNC80Q8N2C7 3258 aa17.88■□□□□ 0.45
PDLIM5-212ENST00000509333 FNDC1Q4ZHG4 1894 aaPredicted RBP17.88■□□□□ 0.45
PDLIM5-212ENST00000509333 BRWD1Q9NSI6 2320 aa17.87■□□□□ 0.45
PDLIM5-212ENST00000509333 SPTBN5Q9NRC6 3674 aaKnown RBP17.87■□□□□ 0.45
PDLIM5-212ENST00000509333 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.87■□□□□ 0.45
PDLIM5-212ENST00000509333 A0A1B0GUA9 196 aa17.87■□□□□ 0.45
PDLIM5-212ENST00000509333 ARF4P18085 180 aaPredicted RBP17.87■□□□□ 0.45
PDLIM5-212ENST00000509333 RAB27AP51159 221 aa17.87■□□□□ 0.45
PDLIM5-212ENST00000509333 GRIN1Q05586 938 aa17.87■□□□□ 0.45
PDLIM5-212ENST00000509333 NCBP1Q09161 790 aaKnown RBP17.87■□□□□ 0.45
PDLIM5-212ENST00000509333 SKIV2LQ15477 1246 aaKnown RBP17.87■□□□□ 0.45
PDLIM5-212ENST00000509333 LONRF3Q496Y0 759 aa17.87■□□□□ 0.45
PDLIM5-212ENST00000509333 AGMOQ6ZNB7 445 aa17.87■□□□□ 0.45
PDLIM5-212ENST00000509333 ABI1Q8IZP0 508 aa17.87■□□□□ 0.45
PDLIM5-212ENST00000509333 SMG8Q8ND04 991 aaKnown RBP17.87■□□□□ 0.45
PDLIM5-212ENST00000509333 PGBD4Q96DM1 585 aa17.87■□□□□ 0.45
PDLIM5-212ENST00000509333 CPB2Q96IY4 423 aa17.87■□□□□ 0.45
PDLIM5-212ENST00000509333 AK8Q96MA6 479 aa17.87■□□□□ 0.45
PDLIM5-212ENST00000509333 PLIN2Q99541 437 aa17.87■□□□□ 0.45
PDLIM5-212ENST00000509333 RNF39Q9H2S5 420 aa17.87■□□□□ 0.45
PDLIM5-212ENST00000509333 LRRIQ4A6NIV6 560 aa17.86■□□□□ 0.45
PDLIM5-212ENST00000509333 ERLIN2O94905 339 aa17.86■□□□□ 0.45
PDLIM5-212ENST00000509333 NCLP19338 710 aaKnown RBP17.86■□□□□ 0.45
PDLIM5-212ENST00000509333 ZRSR1Q15695 479 aaKnown RBP17.86■□□□□ 0.45
PDLIM5-212ENST00000509333 FAM187BQ17R55 369 aa17.86■□□□□ 0.45
PDLIM5-212ENST00000509333 SPOUT1Q5T280 376 aaKnown RBP17.86■□□□□ 0.45
PDLIM5-212ENST00000509333 CDCA2Q69YH5 1023 aaPredicted RBP17.86■□□□□ 0.45
PDLIM5-212ENST00000509333 CABP7Q86V35 215 aa17.86■□□□□ 0.45
PDLIM5-212ENST00000509333 SYT2Q8N9I0 419 aaPredicted RBP17.86■□□□□ 0.45
PDLIM5-212ENST00000509333 COLGALT1Q8NBJ5 622 aa17.86■□□□□ 0.45
PDLIM5-212ENST00000509333 KIFAP3Q92845 792 aa17.86■□□□□ 0.45
PDLIM5-212ENST00000509333 ASB2Q96Q27 587 aa17.86■□□□□ 0.45
PDLIM5-212ENST00000509333 CSRNP2Q9H175 543 aa17.86■□□□□ 0.45
PDLIM5-212ENST00000509333 ZSCAN16Q9H4T2 348 aaPredicted RBP17.86■□□□□ 0.45
PDLIM5-212ENST00000509333 THEGQ9P2T0 379 aa17.86■□□□□ 0.45
PDLIM5-212ENST00000509333 COG5Q9UP83 839 aa17.86■□□□□ 0.45
PDLIM5-212ENST00000509333 B4GALT5O43286 388 aa17.85■□□□□ 0.45
PDLIM5-212ENST00000509333 SLC26A4O43511 780 aa17.85■□□□□ 0.45
PDLIM5-212ENST00000509333 UBA7P41226 1012 aa17.85■□□□□ 0.45
PDLIM5-212ENST00000509333 NAMPTP43490 491 aa17.85■□□□□ 0.45
PDLIM5-212ENST00000509333 AFF1P51825 1210 aaKnown RBP17.85■□□□□ 0.45
PDLIM5-212ENST00000509333 MRPS5P82675 430 aaKnown RBP17.85■□□□□ 0.45
PDLIM5-212ENST00000509333 PLCB3Q01970 1234 aa17.85■□□□□ 0.45
PDLIM5-212ENST00000509333 TFF2Q03403 129 aa17.85■□□□□ 0.45
PDLIM5-212ENST00000509333 TMEM119Q4V9L6 283 aa17.85■□□□□ 0.45
PDLIM5-212ENST00000509333 TCEAL5Q5H9L2 206 aa17.85■□□□□ 0.45
PDLIM5-212ENST00000509333 NOTUMQ6P988 496 aa17.85■□□□□ 0.45
PDLIM5-212ENST00000509333 KCNT2Q6UVM3 1135 aa17.85■□□□□ 0.45
PDLIM5-212ENST00000509333 DAW1Q8N136 415 aa17.85■□□□□ 0.45
PDLIM5-212ENST00000509333 CNNM3Q8NE01 707 aa17.85■□□□□ 0.45
PDLIM5-212ENST00000509333 POF1BQ8WVV4 589 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms