RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 CPA1P15085 419 aa18■□□□□ 0.47
CXCL1-202ENST00000509101 AOC1P19801 751 aa18■□□□□ 0.47
CXCL1-202ENST00000509101 SFNP31947 248 aa18■□□□□ 0.47
CXCL1-202ENST00000509101 SLC11A1P49279 550 aa18■□□□□ 0.47
CXCL1-202ENST00000509101 GPR149Q86SP6 731 aa18■□□□□ 0.47
CXCL1-202ENST00000509101 PPFIBP1Q86W92 1011 aa18■□□□□ 0.47
CXCL1-202ENST00000509101 RSPH1Q8WYR4 309 aa18■□□□□ 0.47
CXCL1-202ENST00000509101 SLC5A5Q92911 643 aa18■□□□□ 0.47
CXCL1-202ENST00000509101 PHKBQ93100 1093 aa18■□□□□ 0.47
CXCL1-202ENST00000509101 RIT2Q99578 217 aa18■□□□□ 0.47
CXCL1-202ENST00000509101 FAM105AQ9NUU6 356 aa18■□□□□ 0.47
CXCL1-202ENST00000509101 CACNA1AO00555 2505 aa17.99■□□□□ 0.47
CXCL1-202ENST00000509101 CARNS1A5YM72 827 aa17.99■□□□□ 0.47
CXCL1-202ENST00000509101 PI15O43692 258 aa17.99■□□□□ 0.47
CXCL1-202ENST00000509101 EDIL3O43854 480 aa17.99■□□□□ 0.47
CXCL1-202ENST00000509101 SKIP12755 728 aa17.99■□□□□ 0.47
CXCL1-202ENST00000509101 TDGQ13569 410 aa17.99■□□□□ 0.47
CXCL1-202ENST00000509101 OTOP3Q7RTS5 596 aa17.99■□□□□ 0.47
CXCL1-202ENST00000509101 CATSPER4Q7RTX7 472 aa17.99■□□□□ 0.47
CXCL1-202ENST00000509101 MIER3Q7Z3K6 550 aa17.99■□□□□ 0.47
CXCL1-202ENST00000509101 RHPN2Q8IUC4 686 aa17.99■□□□□ 0.47
CXCL1-202ENST00000509101 ADSSL1Q8N142 457 aa17.99■□□□□ 0.47
CXCL1-202ENST00000509101 CCDC148Q8NFR7 591 aa17.99■□□□□ 0.47
CXCL1-202ENST00000509101 BICD2Q8TD16 824 aa17.99■□□□□ 0.47
CXCL1-202ENST00000509101 TRAIPQ9BWF2 469 aa17.99■□□□□ 0.47
CXCL1-202ENST00000509101 FBXL21Q9UKT6 434 aa17.99■□□□□ 0.47
CXCL1-202ENST00000509101 DUSP12Q9UNI6 340 aa17.99■□□□□ 0.47
CXCL1-202ENST00000509101 ARID2Q68CP9 1835 aa17.99■□□□□ 0.47
CXCL1-202ENST00000509101 TDRD15B5MCY1 1934 aaKnown RBP17.99■□□□□ 0.47
CXCL1-202ENST00000509101 NID2Q14112 1375 aa17.99■□□□□ 0.47
CXCL1-202ENST00000509101 DOCK8Q8NF50 2099 aa17.99■□□□□ 0.47
CXCL1-202ENST00000509101 PRPF3O43395 683 aaKnown RBP17.98■□□□□ 0.47
CXCL1-202ENST00000509101 OFD1O75665 1012 aa17.98■□□□□ 0.47
CXCL1-202ENST00000509101 NPR3P17342 541 aa17.98■□□□□ 0.47
CXCL1-202ENST00000509101 KLRC2P26717 231 aa17.98■□□□□ 0.47
CXCL1-202ENST00000509101 DNM2P50570 870 aa17.98■□□□□ 0.47
CXCL1-202ENST00000509101 RAB27AP51159 221 aa17.98■□□□□ 0.47
CXCL1-202ENST00000509101 CLCN4P51793 760 aa17.98■□□□□ 0.47
CXCL1-202ENST00000509101 KRT32Q14532 448 aa17.98■□□□□ 0.47
CXCL1-202ENST00000509101 ANGPT1Q15389 498 aa17.98■□□□□ 0.47
CXCL1-202ENST00000509101 TSGA10IPQ3SY00 556 aa17.98■□□□□ 0.47
CXCL1-202ENST00000509101 XKR3Q5GH77 459 aa17.98■□□□□ 0.47
CXCL1-202ENST00000509101 ZNF410Q86VK4 478 aa17.98■□□□□ 0.47
CXCL1-202ENST00000509101 ZNF280BQ86YH2 543 aa17.98■□□□□ 0.47
CXCL1-202ENST00000509101 CCDC105Q8IYK2 499 aa17.98■□□□□ 0.47
CXCL1-202ENST00000509101 SIX5Q8N196 739 aa17.98■□□□□ 0.47
CXCL1-202ENST00000509101 NLRP4Q96MN2 994 aa17.98■□□□□ 0.47
CXCL1-202ENST00000509101 KLHL5Q96PQ7 755 aa17.98■□□□□ 0.47
CXCL1-202ENST00000509101 CEP89Q96ST8 783 aa17.98■□□□□ 0.47
CXCL1-202ENST00000509101 EMILIN2Q9BXX0 1053 aa17.98■□□□□ 0.47
CXCL1-202ENST00000509101 KCNK12Q9HB15 430 aa17.98■□□□□ 0.47
CXCL1-202ENST00000509101 VPS54Q9P1Q0 977 aa17.98■□□□□ 0.47
CXCL1-202ENST00000509101 SUCLA2Q9P2R7 463 aaPredicted RBP17.98■□□□□ 0.47
CXCL1-202ENST00000509101 IGKV6-21A0A0C4DH24 114 aa17.97■□□□□ 0.47
CXCL1-202ENST00000509101 CNPP09543 421 aaKnown RBP17.97■□□□□ 0.47
CXCL1-202ENST00000509101 ID4P47928 161 aa17.97■□□□□ 0.47
CXCL1-202ENST00000509101 CDC42EP1Q00587 391 aa17.97■□□□□ 0.47
CXCL1-202ENST00000509101 AKAP17AQ02040 695 aaKnown RBP17.97■□□□□ 0.47
CXCL1-202ENST00000509101 Q6ZUG5 572 aa17.97■□□□□ 0.47
CXCL1-202ENST00000509101 KSR1Q8IVT5 923 aa17.97■□□□□ 0.47
CXCL1-202ENST00000509101 URGCPQ8TCY9 931 aa17.97■□□□□ 0.47
CXCL1-202ENST00000509101 BRF1Q92994 677 aa17.97■□□□□ 0.47
CXCL1-202ENST00000509101 NIFKQ9BYG3 293 aaKnown RBP17.97■□□□□ 0.47
CXCL1-202ENST00000509101 INO80BQ9C086 356 aaPredicted RBP17.97■□□□□ 0.47
CXCL1-202ENST00000509101 DMXL1Q9Y485 3027 aa17.97■□□□□ 0.47
CXCL1-202ENST00000509101 MTCL1Q9Y4B5 1905 aaKnown RBP17.96■□□□□ 0.47
CXCL1-202ENST00000509101 NARSO43776 548 aaKnown RBP17.96■□□□□ 0.47
CXCL1-202ENST00000509101 PSMD10O75832 226 aa17.96■□□□□ 0.47
CXCL1-202ENST00000509101 STBD1O95210 358 aa17.96■□□□□ 0.47
CXCL1-202ENST00000509101 HMGB1P09429 215 aaKnown RBP17.96■□□□□ 0.47
CXCL1-202ENST00000509101 AGMOQ6ZNB7 445 aa17.96■□□□□ 0.47
CXCL1-202ENST00000509101 DTWD2Q8NBA8 298 aa17.96■□□□□ 0.47
CXCL1-202ENST00000509101 RDM1Q8NG50 284 aa17.96■□□□□ 0.47
CXCL1-202ENST00000509101 PGBD4Q96DM1 585 aa17.96■□□□□ 0.47
CXCL1-202ENST00000509101 RTP3Q9BQQ7 232 aa17.96■□□□□ 0.47
CXCL1-202ENST00000509101 SLC26A6Q9BXS9 759 aa17.96■□□□□ 0.47
CXCL1-202ENST00000509101 ZNF623O75123 536 aa17.95■□□□□ 0.46
CXCL1-202ENST00000509101 DDHD2O94830 711 aa17.95■□□□□ 0.46
CXCL1-202ENST00000509101 TDP2O95551 362 aa17.95■□□□□ 0.46
CXCL1-202ENST00000509101 USP11P51784 963 aa17.95■□□□□ 0.46
CXCL1-202ENST00000509101 AFF1P51825 1210 aaKnown RBP17.95■□□□□ 0.46
CXCL1-202ENST00000509101 LETM2Q2VYF4 491 aa17.95■□□□□ 0.46
CXCL1-202ENST00000509101 PLA2G4FQ68DD2 849 aa17.95■□□□□ 0.46
CXCL1-202ENST00000509101 C15orf39Q6ZRI6 1047 aa17.95■□□□□ 0.46
CXCL1-202ENST00000509101 ERMP1Q7Z2K6 904 aa17.95■□□□□ 0.46
CXCL1-202ENST00000509101 SKAP1Q86WV1 359 aa17.95■□□□□ 0.46
CXCL1-202ENST00000509101 TBCKQ8TEA7 893 aa17.95■□□□□ 0.46
CXCL1-202ENST00000509101 RNF26Q9BY78 433 aaPredicted RBP17.95■□□□□ 0.46
CXCL1-202ENST00000509101 RSAD1Q9HA92 442 aa17.95■□□□□ 0.46
CXCL1-202ENST00000509101 MAN1C1Q9NR34 630 aa17.95■□□□□ 0.46
CXCL1-202ENST00000509101 AGPAT5Q9NUQ2 364 aa17.95■□□□□ 0.46
CXCL1-202ENST00000509101 PCDHB2Q9Y5E7 798 aa17.95■□□□□ 0.46
CXCL1-202ENST00000509101 EP300Q09472 2414 aaPredicted RBP17.95■□□□□ 0.46
CXCL1-202ENST00000509101 DDX11L8A8MPP1 907 aa17.94■□□□□ 0.46
CXCL1-202ENST00000509101 C2CD2LO14523 706 aa17.94■□□□□ 0.46
CXCL1-202ENST00000509101 N4BP1O75113 896 aaKnown RBP17.94■□□□□ 0.46
CXCL1-202ENST00000509101 MAFO75444 373 aaPredicted RBP17.94■□□□□ 0.46
CXCL1-202ENST00000509101 CFHP08603 1231 aa17.94■□□□□ 0.46
CXCL1-202ENST00000509101 BMP2KLQ5H9B9 411 aa17.94■□□□□ 0.46
CXCL1-202ENST00000509101 FAM193BQ96PV7 902 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms