RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 TOX4O94842 621 aa3.46□□□□□ -1.86
DEPDC1B-204ENST00000509006 VSIG10L2P0DP72 767 aa3.46□□□□□ -1.86
DEPDC1B-204ENST00000509006 CDK4P11802 303 aa3.46□□□□□ -1.86
DEPDC1B-204ENST00000509006 ZFP36P26651 326 aaKnown RBP3.46□□□□□ -1.86
DEPDC1B-204ENST00000509006 MYBPC3Q14896 1274 aa3.46□□□□□ -1.86
DEPDC1B-204ENST00000509006 FKBP15Q5T1M5 1219 aa3.46□□□□□ -1.86
DEPDC1B-204ENST00000509006 NAIF1Q69YI7 327 aaPredicted RBP3.46□□□□□ -1.86
DEPDC1B-204ENST00000509006 SLFN12LQ6IEE8 588 aa3.46□□□□□ -1.86
DEPDC1B-204ENST00000509006 ZCCHC8Q6NZY4 707 aaKnown RBP3.46□□□□□ -1.86
DEPDC1B-204ENST00000509006 BMP8AQ7Z5Y6 402 aa3.46□□□□□ -1.86
DEPDC1B-204ENST00000509006 PLA2G15Q8NCC3 412 aa3.46□□□□□ -1.86
DEPDC1B-204ENST00000509006 CHST14Q8NCH0 376 aa3.46□□□□□ -1.86
DEPDC1B-204ENST00000509006 THAP3Q8WTV1 239 aaPredicted RBP3.46□□□□□ -1.86
DEPDC1B-204ENST00000509006 MKL1Q969V6 931 aa3.46□□□□□ -1.86
DEPDC1B-204ENST00000509006 WDR92Q96MX6 357 aa3.46□□□□□ -1.86
DEPDC1B-204ENST00000509006 MNTQ99583 582 aa3.46□□□□□ -1.86
DEPDC1B-204ENST00000509006 TCF25Q9BQ70 676 aa3.46□□□□□ -1.86
DEPDC1B-204ENST00000509006 PITHD1Q9GZP4 211 aaPredicted RBP3.46□□□□□ -1.86
DEPDC1B-204ENST00000509006 TOR3AQ9H497 397 aa3.46□□□□□ -1.86
DEPDC1B-204ENST00000509006 ACSS2Q9NR19 701 aa3.46□□□□□ -1.86
DEPDC1B-204ENST00000509006 POLR3BQ9NW08 1133 aaPredicted RBP3.46□□□□□ -1.86
DEPDC1B-204ENST00000509006 PTCH2Q9Y6C5 1203 aa3.46□□□□□ -1.86
DEPDC1B-204ENST00000509006 ARHGEF17Q96PE2 2063 aaPredicted RBP3.46□□□□□ -1.86
DEPDC1B-204ENST00000509006 UBA6A0AVT1 1052 aaPredicted RBP3.45□□□□□ -1.86
DEPDC1B-204ENST00000509006 GOLGA6L6A8MZA4 724 aa3.45□□□□□ -1.86
DEPDC1B-204ENST00000509006 PLD2O14939 933 aa3.45□□□□□ -1.86
DEPDC1B-204ENST00000509006 KRT37O76014 449 aa3.45□□□□□ -1.86
DEPDC1B-204ENST00000509006 APPP05067 770 aa3.45□□□□□ -1.86
DEPDC1B-204ENST00000509006 PTX3P26022 381 aaPredicted RBP3.45□□□□□ -1.86
DEPDC1B-204ENST00000509006 GTF2F1P35269 517 aaKnown RBP eCLIP3.45□□□□□ -1.86
DEPDC1B-204ENST00000509006 C2orf27AQ580R0 203 aa3.45□□□□□ -1.86
DEPDC1B-204ENST00000509006 TTC38Q5R3I4 469 aa3.45□□□□□ -1.86
DEPDC1B-204ENST00000509006 ZNF362Q5T0B9 420 aaPredicted RBP3.45□□□□□ -1.86
DEPDC1B-204ENST00000509006 CREB3L3Q68CJ9 461 aa3.45□□□□□ -1.86
DEPDC1B-204ENST00000509006 MFSD5Q6N075 450 aa3.45□□□□□ -1.86
DEPDC1B-204ENST00000509006 KANSL1Q7Z3B3 1105 aa3.45□□□□□ -1.86
DEPDC1B-204ENST00000509006 MDGA1Q8NFP4 955 aa3.45□□□□□ -1.86
DEPDC1B-204ENST00000509006 DYDC2Q96IM9 177 aa3.45□□□□□ -1.86
DEPDC1B-204ENST00000509006 ZNF512Q96ME7 567 aaPredicted RBP3.45□□□□□ -1.86
DEPDC1B-204ENST00000509006 CLUHP3Q96NS8 147 aa3.45□□□□□ -1.86
DEPDC1B-204ENST00000509006 PPP1R1BQ9UD71 204 aaPredicted RBP3.45□□□□□ -1.86
DEPDC1B-204ENST00000509006 COL4A3Q01955 1670 aa3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 GOLGA8BA8MQT2 603 aa3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 MTSS1O43312 755 aa3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 STC2O76061 302 aa3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 CYP17A1P05093 508 aa3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 JUNP05412 331 aaKnown RBP3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 HNRNPLP14866 589 aaKnown RBP eCLIP3.44□□□□□ -1.863e-8■■■□□ 15.1
DEPDC1B-204ENST00000509006 KIR2DL3P43628 341 aa3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 BCAR1P56945 870 aa3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 SPIDRQ14159 915 aa3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 EPHA7Q15375 998 aa3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 SF3A1Q15459 793 aaKnown RBP3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 PLEKHG4Q58EX7 1191 aa3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 Q6YL49 198 aa3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 DDX53Q86TM3 631 aaKnown RBP3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 CXorf67Q86X51 503 aaPredicted RBP3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 LILRB2Q8N423 598 aa3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 CPT1CQ8TCG5 803 aa3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 DRC1Q96MC2 740 aa3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 C8orf37Q96NL8 207 aa3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 SOX7Q9BT81 388 aa3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 ENKD1Q9H0I2 346 aa3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 SAMD15Q9P1V8 674 aa3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 DNAI1Q9UI46 699 aa3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 SORCS3Q9UPU3 1222 aa3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 COX11Q9Y6N1 276 aa3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 SPATA31A6Q5VVP1 1343 aa3.44□□□□□ -1.86
DEPDC1B-204ENST00000509006 A0A0A6YYJ9 748 aa3.43□□□□□ -1.86
DEPDC1B-204ENST00000509006 PTPDC1A2A3K4 754 aa3.43□□□□□ -1.86
DEPDC1B-204ENST00000509006 B4E1Z4 1266 aa3.43□□□□□ -1.86
DEPDC1B-204ENST00000509006 LPXNO60711 386 aa3.43□□□□□ -1.86
DEPDC1B-204ENST00000509006 EIF5BO60841 1220 aaKnown RBP3.43□□□□□ -1.86
DEPDC1B-204ENST00000509006 DNAJC8O75937 253 aaPredicted RBP3.43□□□□□ -1.86
DEPDC1B-204ENST00000509006 RAPGEF3O95398 923 aa3.43□□□□□ -1.86
DEPDC1B-204ENST00000509006 IGFALSP35858 605 aa3.43□□□□□ -1.86
DEPDC1B-204ENST00000509006 ZNF460Q14592 562 aa3.43□□□□□ -1.86
DEPDC1B-204ENST00000509006 TIGD2Q4W5G0 525 aa3.43□□□□□ -1.86
DEPDC1B-204ENST00000509006 PRAMEF9Q5VWM5 478 aa3.43□□□□□ -1.86
DEPDC1B-204ENST00000509006 ESRP1Q6NXG1 681 aaKnown RBP3.43□□□□□ -1.86
DEPDC1B-204ENST00000509006 NME9Q86XW9 330 aa3.43□□□□□ -1.86
DEPDC1B-204ENST00000509006 CMTM4Q8IZR5 234 aa3.43□□□□□ -1.86
DEPDC1B-204ENST00000509006 KIAA1958Q8N8K9 716 aa3.43□□□□□ -1.86
DEPDC1B-204ENST00000509006 PPP1R14CQ8TAE6 165 aa3.43□□□□□ -1.86
DEPDC1B-204ENST00000509006 SREK1Q8WXA9 508 aaKnown RBP3.43□□□□□ -1.86
DEPDC1B-204ENST00000509006 SRPK1Q96SB4 655 aaKnown RBP3.43□□□□□ -1.86
DEPDC1B-204ENST00000509006 ZNF768Q9H5H4 540 aaKnown RBP3.43□□□□□ -1.86
DEPDC1B-204ENST00000509006 C14orf93Q9H972 538 aaKnown RBP3.43□□□□□ -1.86
DEPDC1B-204ENST00000509006 CYP4F11Q9HBI6 524 aa3.43□□□□□ -1.86
DEPDC1B-204ENST00000509006 B4GALT6Q9UBX8 382 aa3.43□□□□□ -1.86
DEPDC1B-204ENST00000509006 RCAN3Q9UKA8 241 aa3.43□□□□□ -1.86
DEPDC1B-204ENST00000509006 CENPVL1A0A0U1RR11 272 aa3.42□□□□□ -1.86
DEPDC1B-204ENST00000509006 CBX4O00257 560 aa3.42□□□□□ -1.86
DEPDC1B-204ENST00000509006 PPM1GO15355 546 aaPredicted RBP3.42□□□□□ -1.86
DEPDC1B-204ENST00000509006 MFAP3LO75121 409 aa3.42□□□□□ -1.86
DEPDC1B-204ENST00000509006 IPO13O94829 963 aaKnown RBP3.42□□□□□ -1.86
DEPDC1B-204ENST00000509006 ASLP04424 464 aa3.42□□□□□ -1.86
DEPDC1B-204ENST00000509006 HK1P19367 917 aa3.42□□□□□ -1.86
DEPDC1B-204ENST00000509006 PTTG1IPP53801 180 aa3.42□□□□□ -1.86
DEPDC1B-204ENST00000509006 FNDC3BQ53EP0 1204 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms