RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 XRCC6P12956 609 aaKnown RBP eCLIP15.18■□□□□ 0.02
CCHCR1-227ENST00000508852 NEK4P51957 841 aa15.18■□□□□ 0.02
CCHCR1-227ENST00000508852 TFDP1Q14186 410 aa15.18■□□□□ 0.02
CCHCR1-227ENST00000508852 CALCRLQ16602 461 aa15.18■□□□□ 0.02
CCHCR1-227ENST00000508852 ME3Q16798 604 aa15.18■□□□□ 0.02
CCHCR1-227ENST00000508852 NOMO2Q5JPE7 1267 aa15.18■□□□□ 0.02
CCHCR1-227ENST00000508852 PLPP4Q5VZY2 271 aa15.18■□□□□ 0.02
CCHCR1-227ENST00000508852 PLA2G4FQ68DD2 849 aa15.18■□□□□ 0.02
CCHCR1-227ENST00000508852 POTEDQ86YR6 584 aa15.18■□□□□ 0.02
CCHCR1-227ENST00000508852 SLC39A11Q8N1S5 342 aa15.18■□□□□ 0.02
CCHCR1-227ENST00000508852 PRPF31Q8WWY3 499 aaKnown RBP15.18■□□□□ 0.02
CCHCR1-227ENST00000508852 CCDC51Q96ER9 411 aa15.18■□□□□ 0.02
CCHCR1-227ENST00000508852 ZNF668Q96K58 619 aaPredicted RBP15.18■□□□□ 0.02
CCHCR1-227ENST00000508852 CCDC43Q96MW1 224 aaKnown RBP15.18■□□□□ 0.02
CCHCR1-227ENST00000508852 MTRQ99707 1265 aa15.18■□□□□ 0.02
CCHCR1-227ENST00000508852 IFT122Q9HBG6 1241 aa15.18■□□□□ 0.02
CCHCR1-227ENST00000508852 ANKEF1Q9NU02 776 aa15.18■□□□□ 0.02
CCHCR1-227ENST00000508852 AGPAT5Q9NUQ2 364 aa15.18■□□□□ 0.02
CCHCR1-227ENST00000508852 ARID2Q68CP9 1835 aa15.17■□□□□ 0.02
CCHCR1-227ENST00000508852 TMEM150BA6NC51 233 aa15.17■□□□□ 0.02
CCHCR1-227ENST00000508852 NEMFO60524 1076 aa15.17■□□□□ 0.02
CCHCR1-227ENST00000508852 DGAT1O75907 488 aa15.17■□□□□ 0.02
CCHCR1-227ENST00000508852 GLP2RO95838 553 aa15.17■□□□□ 0.02
CCHCR1-227ENST00000508852 FGFR4P22455 802 aa15.17■□□□□ 0.02
CCHCR1-227ENST00000508852 NPEPPSP55786 919 aa15.17■□□□□ 0.02
CCHCR1-227ENST00000508852 BCAR1P56945 870 aa15.17■□□□□ 0.02
CCHCR1-227ENST00000508852 RNASELQ05823 741 aaKnown RBP15.17■□□□□ 0.02
CCHCR1-227ENST00000508852 LAMTOR4Q0VGL1 99 aa15.17■□□□□ 0.02
CCHCR1-227ENST00000508852 ORC2Q13416 577 aaPredicted RBP15.17■□□□□ 0.02
CCHCR1-227ENST00000508852 EMC2Q15006 297 aa15.17■□□□□ 0.02
CCHCR1-227ENST00000508852 XKR9Q5GH70 373 aa15.17■□□□□ 0.02
CCHCR1-227ENST00000508852 MRPL43Q8N983 215 aaKnown RBP15.17■□□□□ 0.02
CCHCR1-227ENST00000508852 OXER1Q8TDS5 423 aa15.17■□□□□ 0.02
CCHCR1-227ENST00000508852 MFSD14AQ96MC6 490 aa15.17■□□□□ 0.02
CCHCR1-227ENST00000508852 NECTIN4Q96NY8 510 aa15.17■□□□□ 0.02
CCHCR1-227ENST00000508852 C11orf16Q9NQ32 467 aa15.17■□□□□ 0.02
CCHCR1-227ENST00000508852 BARX2Q9UMQ3 279 aaPredicted RBP15.17■□□□□ 0.02
CCHCR1-227ENST00000508852 USP15Q9Y4E8 981 aaPredicted RBP15.17■□□□□ 0.02
CCHCR1-227ENST00000508852 LOC730098B7Z3J9 87 aa15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 PER2O15055 1255 aa15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 ERLIN2O94905 339 aa15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 SRGAP2CP0DJJ0 459 aa15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 FDPSP14324 419 aaKnown RBP15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 ITIH3Q06033 890 aa15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 SPIRE1Q08AE8 756 aa15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 KCNC3Q14003 757 aa15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 CBX2Q14781 532 aaPredicted RBP15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 CES5AQ6NT32 575 aa15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 ANKRD54Q6NXT1 300 aa15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 MRPL10Q7Z7H8 261 aaKnown RBP15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 DDX53Q86TM3 631 aaKnown RBP15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 FERMT3Q86UX7 667 aa15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 PPFIBP1Q86W92 1011 aa15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 RNF135Q8IUD6 432 aa15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 TPH2Q8IWU9 490 aa15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 DIS3L2Q8IYB7 885 aaKnown RBP15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 HACE1Q8IYU2 909 aa15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 NSUN7Q8NE18 718 aaKnown RBP15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 SUSD6Q92537 303 aa15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 TNFRSF25Q93038 417 aa15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 DYDC2Q96IM9 177 aa15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 FAM193BQ96PV7 902 aaPredicted RBP15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 SH2D3AQ9BRG2 576 aa15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 LLPHQ9BRT6 129 aaKnown RBP15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 DZANK1Q9NVP4 752 aa15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 NR2E1Q9Y466 385 aa15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 PCDHB2Q9Y5E7 798 aa15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 IRAK3Q9Y616 596 aa15.16■□□□□ 0.02
CCHCR1-227ENST00000508852 FAM86C2PA6NEL3 165 aa15.15■□□□□ 0.02
CCHCR1-227ENST00000508852 CSDE1O75534 798 aaKnown RBP15.15■□□□□ 0.02
CCHCR1-227ENST00000508852 OFD1O75665 1012 aa15.15■□□□□ 0.02
CCHCR1-227ENST00000508852 SLITRK3O94933 977 aa15.15■□□□□ 0.02
CCHCR1-227ENST00000508852 TECP42680 631 aa15.15■□□□□ 0.02
CCHCR1-227ENST00000508852 NR5A1Q13285 461 aa15.15■□□□□ 0.02
CCHCR1-227ENST00000508852 KSR1Q8IVT5 923 aa15.15■□□□□ 0.02
CCHCR1-227ENST00000508852 NECAB1Q8N987 351 aa15.15■□□□□ 0.02
CCHCR1-227ENST00000508852 RNF149Q8NC42 400 aa15.15■□□□□ 0.02
CCHCR1-227ENST00000508852 EDAQ92838 391 aa15.15■□□□□ 0.02
CCHCR1-227ENST00000508852 TMEM143Q96AN5 459 aa15.15■□□□□ 0.02
CCHCR1-227ENST00000508852 HSD17B14Q9BPX1 270 aa15.15■□□□□ 0.02
CCHCR1-227ENST00000508852 EIF2AK1Q9BQI3 630 aaKnown RBP15.15■□□□□ 0.02
CCHCR1-227ENST00000508852 TMEM175Q9BSA9 504 aa15.15■□□□□ 0.02
CCHCR1-227ENST00000508852 NFKBIZQ9BYH8 718 aa15.15■□□□□ 0.02
CCHCR1-227ENST00000508852 TTC12Q9H892 705 aaPredicted RBP15.15■□□□□ 0.02
CCHCR1-227ENST00000508852 RGL1Q9NZL6 768 aa15.15■□□□□ 0.02
CCHCR1-227ENST00000508852 HCSTQ9UBK5 93 aa15.15■□□□□ 0.02
CCHCR1-227ENST00000508852 LIMCH1Q9UPQ0 1083 aa15.15■□□□□ 0.02
CCHCR1-227ENST00000508852 SSX2IPQ9Y2D8 614 aa15.15■□□□□ 0.02
CCHCR1-227ENST00000508852 C2orf71A6NGG8 1288 aa15.14■□□□□ 0.01
CCHCR1-227ENST00000508852 BTBD18B2RXH4 712 aa15.14■□□□□ 0.01
CCHCR1-227ENST00000508852 ZC3H11AO75152 810 aaKnown RBP eCLIP15.14■□□□□ 0.01
CCHCR1-227ENST00000508852 NR1I2O75469 434 aa15.14■□□□□ 0.01
CCHCR1-227ENST00000508852 CXCL14O95715 111 aa15.14■□□□□ 0.01
CCHCR1-227ENST00000508852 ALDH2P05091 517 aa15.14■□□□□ 0.01
CCHCR1-227ENST00000508852 NCLP19338 710 aaKnown RBP15.14■□□□□ 0.01
CCHCR1-227ENST00000508852 CYP4A11Q02928 519 aa15.14■□□□□ 0.01
CCHCR1-227ENST00000508852 CTTNQ14247 550 aaKnown RBP15.14■□□□□ 0.01
CCHCR1-227ENST00000508852 NOTUMQ6P988 496 aa15.14■□□□□ 0.01
CCHCR1-227ENST00000508852 IFNLR1Q8IU57 520 aaPredicted RBP15.14■□□□□ 0.01
CCHCR1-227ENST00000508852 IGSF21Q96ID5 467 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms