RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 SSTR3P32745 418 aaPredicted RBP18.12■□□□□ 0.49
LMNA-222ENST00000508500 RFC5P40937 340 aa18.12■□□□□ 0.49
LMNA-222ENST00000508500 NDUFV1P49821 464 aa18.12■□□□□ 0.49
LMNA-222ENST00000508500 POLGP54098 1239 aaPredicted RBP18.12■□□□□ 0.49
LMNA-222ENST00000508500 LAMTOR4Q0VGL1 99 aa18.12■□□□□ 0.49
LMNA-222ENST00000508500 SMAD4Q13485 552 aaKnown RBP18.12■□□□□ 0.49
LMNA-222ENST00000508500 KCNC3Q14003 757 aa18.12■□□□□ 0.49
LMNA-222ENST00000508500 CALCRLQ16602 461 aa18.12■□□□□ 0.49
LMNA-222ENST00000508500 DUSP6Q16828 381 aa18.12■□□□□ 0.49
LMNA-222ENST00000508500 CSPP1Q1MSJ5 1256 aa18.12■□□□□ 0.49
LMNA-222ENST00000508500 XKR9Q5GH70 373 aa18.12■□□□□ 0.49
LMNA-222ENST00000508500 TPH2Q8IWU9 490 aa18.12■□□□□ 0.49
LMNA-222ENST00000508500 ABI1Q8IZP0 508 aa18.12■□□□□ 0.49
LMNA-222ENST00000508500 SLC39A11Q8N1S5 342 aa18.12■□□□□ 0.49
LMNA-222ENST00000508500 MICAL1Q8TDZ2 1067 aa18.12■□□□□ 0.49
LMNA-222ENST00000508500 SLC7A3Q8WY07 619 aa18.12■□□□□ 0.49
LMNA-222ENST00000508500 INO80BQ9C086 356 aaPredicted RBP18.12■□□□□ 0.49
LMNA-222ENST00000508500 TLE6Q9H808 572 aa18.12■□□□□ 0.49
LMNA-222ENST00000508500 TTC12Q9H892 705 aaPredicted RBP18.12■□□□□ 0.49
LMNA-222ENST00000508500 FAM105AQ9NUU6 356 aa18.12■□□□□ 0.49
LMNA-222ENST00000508500 LIMCH1Q9UPQ0 1083 aa18.12■□□□□ 0.49
LMNA-222ENST00000508500 LZTS1Q9Y250 596 aa18.12■□□□□ 0.49
LMNA-222ENST00000508500 PPME1Q9Y570 386 aa18.12■□□□□ 0.49
LMNA-222ENST00000508500 HIDE1A8MVS5 230 aa18.11■□□□□ 0.49
LMNA-222ENST00000508500 NT5C1B-RDH14C9J2C7 533 aa18.11■□□□□ 0.49
LMNA-222ENST00000508500 DCXO43602 365 aa18.11■□□□□ 0.49
LMNA-222ENST00000508500 ZNF623O75123 536 aa18.11■□□□□ 0.49
LMNA-222ENST00000508500 LYPLA2O95372 231 aa18.11■□□□□ 0.49
LMNA-222ENST00000508500 ALADP13716 330 aa18.11■□□□□ 0.49
LMNA-222ENST00000508500 HOXA11P31270 313 aaPredicted RBP18.11■□□□□ 0.49
LMNA-222ENST00000508500 TXKP42681 527 aa18.11■□□□□ 0.49
LMNA-222ENST00000508500 EMC2Q15006 297 aa18.11■□□□□ 0.49
LMNA-222ENST00000508500 UBXN11Q5T124 520 aa18.11■□□□□ 0.49
LMNA-222ENST00000508500 TWF2Q6IBS0 349 aaKnown RBP18.11■□□□□ 0.49
LMNA-222ENST00000508500 CATSPER4Q7RTX7 472 aa18.11■□□□□ 0.49
LMNA-222ENST00000508500 FERMT3Q86UX7 667 aa18.11■□□□□ 0.49
LMNA-222ENST00000508500 TMEM173Q86WV6 379 aaPredicted RBP18.11■□□□□ 0.49
LMNA-222ENST00000508500 SMRP1Q8NCR6 262 aa18.11■□□□□ 0.49
LMNA-222ENST00000508500 PPP2R3CQ969Q6 453 aa18.11■□□□□ 0.49
LMNA-222ENST00000508500 ZNF558Q96NG5 402 aa18.11■□□□□ 0.49
LMNA-222ENST00000508500 AGPAT5Q9NUQ2 364 aa18.11■□□□□ 0.49
LMNA-222ENST00000508500 TRIP11Q15643 1979 aa18.1■□□□□ 0.49
LMNA-222ENST00000508500 B4GALT3O60512 393 aa18.1■□□□□ 0.49
LMNA-222ENST00000508500 NEMFO60524 1076 aa18.1■□□□□ 0.49
LMNA-222ENST00000508500 OFD1O75665 1012 aa18.1■□□□□ 0.49
LMNA-222ENST00000508500 COASYQ13057 564 aa18.1■□□□□ 0.49
LMNA-222ENST00000508500 PLPP4Q5VZY2 271 aa18.1■□□□□ 0.49
LMNA-222ENST00000508500 OTUD6AQ7L8S5 288 aa18.1■□□□□ 0.49
LMNA-222ENST00000508500 SRGAP1Q7Z6B7 1085 aa18.1■□□□□ 0.49
LMNA-222ENST00000508500 PSPC1Q8WXF1 523 aaKnown RBP18.1■□□□□ 0.49
LMNA-222ENST00000508500 TCF25Q9BQ70 676 aa18.1■□□□□ 0.49
LMNA-222ENST00000508500 SPG21Q9NZD8 308 aa18.1■□□□□ 0.49
LMNA-222ENST00000508500 POTEMA6NI47 508 aa18.09■□□□□ 0.49
LMNA-222ENST00000508500 EIF5BO60841 1220 aaKnown RBP18.09■□□□□ 0.49
LMNA-222ENST00000508500 SPATA31C1P0DKV0 1188 aa18.09■□□□□ 0.49
LMNA-222ENST00000508500 AFF1P51825 1210 aaKnown RBP18.09■□□□□ 0.49
LMNA-222ENST00000508500 BCAR1P56945 870 aa18.09■□□□□ 0.49
LMNA-222ENST00000508500 TRIM29Q14134 588 aa18.09■□□□□ 0.49
LMNA-222ENST00000508500 PDE12Q6L8Q7 609 aaKnown RBP18.09■□□□□ 0.49
LMNA-222ENST00000508500 AGMOQ6ZNB7 445 aa18.09■□□□□ 0.49
LMNA-222ENST00000508500 MRPL10Q7Z7H8 261 aaKnown RBP18.09■□□□□ 0.49
LMNA-222ENST00000508500 EXOC8Q8IYI6 725 aa18.09■□□□□ 0.49
LMNA-222ENST00000508500 BCL7CQ8WUZ0 217 aaPredicted RBP18.09■□□□□ 0.49
LMNA-222ENST00000508500 MTRQ99707 1265 aa18.09■□□□□ 0.49
LMNA-222ENST00000508500 NRDE2Q9H7Z3 1164 aa18.09■□□□□ 0.49
LMNA-222ENST00000508500 TBC1D13Q9NVG8 400 aa18.09■□□□□ 0.49
LMNA-222ENST00000508500 FAM50BQ9Y247 325 aa18.09■□□□□ 0.49
LMNA-222ENST00000508500 ATP2B1P20020 1258 aa18.08■□□□□ 0.48
LMNA-222ENST00000508500 PPM1AP35813 382 aa18.08■□□□□ 0.48
LMNA-222ENST00000508500 RARRES1P49788 294 aa18.08■□□□□ 0.48
LMNA-222ENST00000508500 TMEM184AQ6ZMB5 413 aa18.08■□□□□ 0.48
LMNA-222ENST00000508500 RNF149Q8NC42 400 aa18.08■□□□□ 0.48
LMNA-222ENST00000508500 ASAP3Q8TDY4 903 aa18.08■□□□□ 0.48
LMNA-222ENST00000508500 PIGOQ8TEQ8 1089 aa18.08■□□□□ 0.48
LMNA-222ENST00000508500 TCP11Q8WWU5 503 aa18.08■□□□□ 0.48
LMNA-222ENST00000508500 LLPHQ9BRT6 129 aaKnown RBP18.08■□□□□ 0.48
LMNA-222ENST00000508500 MRPL9Q9BYD2 267 aaKnown RBP18.08■□□□□ 0.48
LMNA-222ENST00000508500 ANKEF1Q9NU02 776 aa18.08■□□□□ 0.48
LMNA-222ENST00000508500 PCDHB2Q9Y5E7 798 aa18.08■□□□□ 0.48
LMNA-222ENST00000508500 ASAP2O43150 1006 aa18.07■□□□□ 0.48
LMNA-222ENST00000508500 GAS2O43903 313 aaKnown RBP18.07■□□□□ 0.48
LMNA-222ENST00000508500 MCM7P33993 719 aa18.07■□□□□ 0.48
LMNA-222ENST00000508500 ARL2P36404 184 aa18.07■□□□□ 0.48
LMNA-222ENST00000508500 RAB27AP51159 221 aa18.07■□□□□ 0.48
LMNA-222ENST00000508500 PTENP60484 403 aa18.07■□□□□ 0.48
LMNA-222ENST00000508500 HERC4Q5GLZ8 1057 aaPredicted RBP18.07■□□□□ 0.48
LMNA-222ENST00000508500 ZNF280BQ86YH2 543 aa18.07■□□□□ 0.48
LMNA-222ENST00000508500 SMG8Q8ND04 991 aaKnown RBP18.07■□□□□ 0.48
LMNA-222ENST00000508500 C8orf76Q96K31 380 aa18.07■□□□□ 0.48
LMNA-222ENST00000508500 CDCA3Q99618 268 aaPredicted RBP18.07■□□□□ 0.48
LMNA-222ENST00000508500 S1PR5Q9H228 398 aa18.07■□□□□ 0.48
LMNA-222ENST00000508500 ENTPD7Q9NQZ7 604 aa18.07■□□□□ 0.48
LMNA-222ENST00000508500 DNAJB4Q9UDY4 337 aa18.07■□□□□ 0.48
LMNA-222ENST00000508500 PUF60Q9UHX1 559 aaKnown RBP18.07■□□□□ 0.48
LMNA-222ENST00000508500 USP15Q9Y4E8 981 aaPredicted RBP18.07■□□□□ 0.48
LMNA-222ENST00000508500 KMT2EQ8IZD2 1858 aa18.07■□□□□ 0.48
LMNA-222ENST00000508500 C2orf16Q68DN1 1984 aa18.06■□□□□ 0.48
LMNA-222ENST00000508500 PLXNA3P51805 1871 aa18.06■□□□□ 0.48
LMNA-222ENST00000508500 TSPAN1O60635 241 aa18.06■□□□□ 0.48
LMNA-222ENST00000508500 ZC3H11AO75152 810 aaKnown RBP eCLIP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms