RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 PRSS50Q9UI38 385 aa6.95□□□□□ -1.3
GYPA-205ENST00000508337 JUNP05412 331 aaKnown RBP6.94□□□□□ -1.3
GYPA-205ENST00000508337 CCT2P78371 535 aaKnown RBP6.94□□□□□ -1.3
GYPA-205ENST00000508337 CDK17Q00537 523 aa6.94□□□□□ -1.3
GYPA-205ENST00000508337 AMPD3Q01432 767 aa6.94□□□□□ -1.3
GYPA-205ENST00000508337 RIN1Q13671 783 aa6.94□□□□□ -1.3
GYPA-205ENST00000508337 PDCD1Q15116 288 aa6.94□□□□□ -1.3
GYPA-205ENST00000508337 UNC5BQ8IZJ1 945 aa6.94□□□□□ -1.3
GYPA-205ENST00000508337 BCL6BQ8N143 479 aaPredicted RBP6.94□□□□□ -1.3
GYPA-205ENST00000508337 NKD2Q969F2 451 aaPredicted RBP6.94□□□□□ -1.3
GYPA-205ENST00000508337 TMEM176AQ96HP8 235 aa6.94□□□□□ -1.3
GYPA-205ENST00000508337 SMAD5Q99717 465 aaKnown RBP6.94□□□□□ -1.3
GYPA-205ENST00000508337 PTPN18Q99952 460 aa6.94□□□□□ -1.3
GYPA-205ENST00000508337 PLA2G12BQ9BX93 195 aa6.94□□□□□ -1.3
GYPA-205ENST00000508337 HAPLN2Q9GZV7 340 aa6.94□□□□□ -1.3
GYPA-205ENST00000508337 HOMER2Q9NSB8 354 aa6.94□□□□□ -1.3
GYPA-205ENST00000508337 CNOT11Q9UKZ1 510 aaKnown RBP6.94□□□□□ -1.3
GYPA-205ENST00000508337 ZFR2Q9UPR6 939 aaKnown RBP6.94□□□□□ -1.3
GYPA-205ENST00000508337 NOP58Q9Y2X3 529 aaKnown RBP6.94□□□□□ -1.3
GYPA-205ENST00000508337 CDY2AQ9Y6F7 541 aa6.94□□□□□ -1.3
GYPA-205ENST00000508337 VSIG10L2P0DP72 767 aa6.93□□□□□ -1.3
GYPA-205ENST00000508337 CDKN1CP49918 316 aaPredicted RBP6.93□□□□□ -1.3
GYPA-205ENST00000508337 IGBP1P78318 339 aa6.93□□□□□ -1.3
GYPA-205ENST00000508337 KLF1Q13351 362 aaPredicted RBP6.93□□□□□ -1.3
GYPA-205ENST00000508337 GAGE13Q4V321 117 aa6.93□□□□□ -1.3
GYPA-205ENST00000508337 TOR2AQ5JU69 321 aa6.93□□□□□ -1.3
GYPA-205ENST00000508337 CLEC14AQ86T13 490 aa6.93□□□□□ -1.3
GYPA-205ENST00000508337 RABGGTAQ92696 567 aa6.93□□□□□ -1.3
GYPA-205ENST00000508337 NELFAQ9H3P2 528 aa6.93□□□□□ -1.3
GYPA-205ENST00000508337 VTA1Q9NP79 307 aa6.93□□□□□ -1.3
GYPA-205ENST00000508337 SMPD4Q9NXE4 827 aa6.93□□□□□ -1.3
GYPA-205ENST00000508337 C2orf78A6NCI8 922 aa6.92□□□□□ -1.3
GYPA-205ENST00000508337 ALDH1A2O94788 518 aa6.92□□□□□ -1.3
GYPA-205ENST00000508337 MT-CO1P00395 513 aa6.92□□□□□ -1.3
GYPA-205ENST00000508337 CFBP00751 764 aa6.92□□□□□ -1.3
GYPA-205ENST00000508337 GAAP10253 952 aa6.92□□□□□ -1.3
GYPA-205ENST00000508337 SLC5A3P53794 718 aa6.92□□□□□ -1.3
GYPA-205ENST00000508337 NPEPPSP55786 919 aa6.92□□□□□ -1.3
GYPA-205ENST00000508337 MRPS9P82933 396 aaKnown RBP6.92□□□□□ -1.3
GYPA-205ENST00000508337 TRIM25Q14258 630 aaKnown RBP6.92□□□□□ -1.3
GYPA-205ENST00000508337 ACAP2Q15057 778 aa6.92□□□□□ -1.3
GYPA-205ENST00000508337 PGM2L1Q6PCE3 622 aa6.92□□□□□ -1.3
GYPA-205ENST00000508337 GAREM2Q75VX8 874 aa6.92□□□□□ -1.3
GYPA-205ENST00000508337 POLNQ7Z5Q5 900 aa6.92□□□□□ -1.3
GYPA-205ENST00000508337 LMBR1Q8WVP7 490 aa6.92□□□□□ -1.3
GYPA-205ENST00000508337 SAMD11Q96NU1 681 aa6.92□□□□□ -1.3
GYPA-205ENST00000508337 TCF25Q9BQ70 676 aa6.92□□□□□ -1.3
GYPA-205ENST00000508337 ACE2Q9BYF1 805 aaPredicted RBP6.92□□□□□ -1.3
GYPA-205ENST00000508337 CCM2LQ9NUG4 571 aaPredicted RBP6.92□□□□□ -1.3
GYPA-205ENST00000508337 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.92□□□□□ -1.3
GYPA-205ENST00000508337 MRFAP1Q9Y605 127 aa6.92□□□□□ -1.3
GYPA-205ENST00000508337 B8ZZF3 427 aa6.91□□□□□ -1.3
GYPA-205ENST00000508337 XPOTO43592 962 aaKnown RBP6.91□□□□□ -1.3
GYPA-205ENST00000508337 KATNA1O75449 491 aa6.91□□□□□ -1.3
GYPA-205ENST00000508337 RAD17O75943 681 aa6.91□□□□□ -1.3
GYPA-205ENST00000508337 SEC24DO94855 1032 aaPredicted RBP6.91□□□□□ -1.3
GYPA-205ENST00000508337 LY86O95711 162 aa6.91□□□□□ -1.3
GYPA-205ENST00000508337 MYBL2P10244 700 aa6.91□□□□□ -1.3
GYPA-205ENST00000508337 POU3F3P20264 500 aaPredicted RBP6.91□□□□□ -1.3
GYPA-205ENST00000508337 KIR2DL3P43628 341 aa6.91□□□□□ -1.3
GYPA-205ENST00000508337 EVA1CP58658 441 aa6.91□□□□□ -1.3
GYPA-205ENST00000508337 SRSF2Q01130 221 aaKnown RBP6.91□□□□□ -1.3
GYPA-205ENST00000508337 HGFACQ04756 655 aa6.91□□□□□ -1.3
GYPA-205ENST00000508337 DUSP2Q05923 314 aa6.91□□□□□ -1.3
GYPA-205ENST00000508337 CD69Q07108 199 aa6.91□□□□□ -1.3
GYPA-205ENST00000508337 GRM7Q14831 915 aa6.91□□□□□ -1.3
GYPA-205ENST00000508337 PRRT2Q7Z6L0 340 aaPredicted RBP6.91□□□□□ -1.3
GYPA-205ENST00000508337 PNMA8AQ86V59 439 aaPredicted RBP6.91□□□□□ -1.3
GYPA-205ENST00000508337 D2HGDHQ8N465 521 aa6.91□□□□□ -1.3
GYPA-205ENST00000508337 FAM89AQ96GI7 184 aa6.91□□□□□ -1.3
GYPA-205ENST00000508337 CEP89Q96ST8 783 aa6.91□□□□□ -1.3
GYPA-205ENST00000508337 MENTQ9BUN1 341 aa6.91□□□□□ -1.3
GYPA-205ENST00000508337 BRINP2Q9C0B6 783 aa6.91□□□□□ -1.3
GYPA-205ENST00000508337 IL23AQ9NPF7 189 aa6.91□□□□□ -1.3
GYPA-205ENST00000508337 MKS1Q9NXB0 559 aa6.91□□□□□ -1.3
GYPA-205ENST00000508337 EVLQ9UI08 416 aaPredicted RBP6.91□□□□□ -1.3
GYPA-205ENST00000508337 ST6GALNAC2Q9UJ37 374 aa6.91□□□□□ -1.3
GYPA-205ENST00000508337 TRHDEQ9UKU6 1024 aa6.91□□□□□ -1.3
GYPA-205ENST00000508337 GPR42O15529 346 aa6.9□□□□□ -1.3
GYPA-205ENST00000508337 OSMP13725 252 aa6.9□□□□□ -1.3
GYPA-205ENST00000508337 CCND1P24385 295 aa6.9□□□□□ -1.3
GYPA-205ENST00000508337 MSX2P35548 267 aaPredicted RBP6.9□□□□□ -1.3
GYPA-205ENST00000508337 ADCY7P51828 1080 aa6.9□□□□□ -1.3
GYPA-205ENST00000508337 MEF2AQ02078 507 aaPredicted RBP6.9□□□□□ -1.3
GYPA-205ENST00000508337 ABCB5Q2M3G0 1257 aa6.9□□□□□ -1.3
GYPA-205ENST00000508337 SPATS1Q496A3 300 aa6.9□□□□□ -1.3
GYPA-205ENST00000508337 SYDE2Q5VT97 1194 aa6.9□□□□□ -1.3
GYPA-205ENST00000508337 TCTN3Q6NUS6 607 aa6.9□□□□□ -1.3
GYPA-205ENST00000508337 ZNF585AQ6P3V2 769 aa6.9□□□□□ -1.3
GYPA-205ENST00000508337 CMIPQ8IY22 773 aa6.9□□□□□ -1.3
GYPA-205ENST00000508337 FUKQ8N0W3 1084 aa6.9□□□□□ -1.3
GYPA-205ENST00000508337 OR5M3Q8NGP4 307 aa6.9□□□□□ -1.3
GYPA-205ENST00000508337 C8orf49Q96NF6 230 aa6.9□□□□□ -1.3
GYPA-205ENST00000508337 CDK5RAP1Q96SZ6 601 aaKnown RBP6.9□□□□□ -1.3
GYPA-205ENST00000508337 ADI1Q9BV57 179 aa6.9□□□□□ -1.3
GYPA-205ENST00000508337 IFT122Q9HBG6 1241 aa6.9□□□□□ -1.3
GYPA-205ENST00000508337 PHLDB1Q86UU1 1377 aa6.9□□□□□ -1.31
GYPA-205ENST00000508337 A0A0A6YYK5 440 aaPredicted RBP6.89□□□□□ -1.31
GYPA-205ENST00000508337 LOC105371045A0A1W2PR82 267 aa6.89□□□□□ -1.31
GYPA-205ENST00000508337 MTSS1O43312 755 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms