RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 VSIG1Q86XK7 387 aa13.69□□□□□ -0.22
DDR1-262ENST00000508312 KLHL23Q8NBE8 558 aa13.69□□□□□ -0.22
DDR1-262ENST00000508312 ATP6V0A2Q9Y487 856 aa13.69□□□□□ -0.22
DDR1-262ENST00000508312 KRT13P13646 458 aa13.68□□□□□ -0.22
DDR1-262ENST00000508312 FGFR4P22455 802 aa13.68□□□□□ -0.22
DDR1-262ENST00000508312 USP11P51784 963 aa13.68□□□□□ -0.22
DDR1-262ENST00000508312 FAM81AQ8TBF8 368 aa13.68□□□□□ -0.22
DDR1-262ENST00000508312 FGD4Q96M96 766 aa13.68□□□□□ -0.22
DDR1-262ENST00000508312 ADAM7Q9H2U9 754 aa13.68□□□□□ -0.22
DDR1-262ENST00000508312 VCXQ9H320 206 aa13.68□□□□□ -0.22
DDR1-262ENST00000508312 SH3GLB2Q9NR46 395 aa13.68□□□□□ -0.22
DDR1-262ENST00000508312 ARHGEF3Q9NR81 526 aa13.68□□□□□ -0.22
DDR1-262ENST00000508312 RPS6KL1Q9Y6S9 549 aa13.68□□□□□ -0.22
DDR1-262ENST00000508312 KIAA1551Q9HCM1 1747 aa13.68□□□□□ -0.22
DDR1-262ENST00000508312 ACTN1P12814 892 aa13.68□□□□□ -0.22
DDR1-262ENST00000508312 CNGA1P29973 690 aa13.68□□□□□ -0.22
DDR1-262ENST00000508312 ASIC2Q16515 512 aa13.68□□□□□ -0.22
DDR1-262ENST00000508312 EIF1ADQ8N9N8 165 aaKnown RBP13.68□□□□□ -0.22
DDR1-262ENST00000508312 CYP2W1Q8TAV3 490 aa13.68□□□□□ -0.22
DDR1-262ENST00000508312 GLG1Q92896 1179 aa13.68□□□□□ -0.22
DDR1-262ENST00000508312 RBM17Q96I25 401 aaKnown RBP13.68□□□□□ -0.22
DDR1-262ENST00000508312 TMEM237Q96Q45 408 aa13.68□□□□□ -0.22
DDR1-262ENST00000508312 RAB3IPQ96QF0 476 aaPredicted RBP13.68□□□□□ -0.22
DDR1-262ENST00000508312 SPZ1Q9BXG8 430 aa13.68□□□□□ -0.22
DDR1-262ENST00000508312 ZC3H12CQ9C0D7 883 aaKnown RBP13.68□□□□□ -0.22
DDR1-262ENST00000508312 KIAA1024Q9UPX6 916 aa13.68□□□□□ -0.22
DDR1-262ENST00000508312 CENPFP49454 3210 aa13.68□□□□□ -0.22
DDR1-262ENST00000508312 POTEFA5A3E0 1075 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 SFI1A8K8P3 1242 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 POTEIP0CG38 1075 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 ZYXQ15942 572 aaKnown RBP13.67□□□□□ -0.22
DDR1-262ENST00000508312 CCDC6Q16204 474 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 HHATQ5VTY9 493 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 TCERG1LQ5VWI1 586 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 POTEGQ6S5H5 508 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 POTEEQ6S8J3 1075 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 MTHFD1LQ6UB35 978 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 INTS8Q75QN2 995 aaKnown RBP13.67□□□□□ -0.22
DDR1-262ENST00000508312 P2RX7Q99572 595 aaKnown RBP13.67□□□□□ -0.22
DDR1-262ENST00000508312 DDX25Q9UHL0 483 aaKnown RBP13.67□□□□□ -0.22
DDR1-262ENST00000508312 SERPINB13Q9UIV8 391 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 CASZ1Q86V15 1759 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 CCDC188H7C350 402 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 PPEF1O14829 653 aaPredicted RBP13.67□□□□□ -0.22
DDR1-262ENST00000508312 FGFR1OPO95684 399 aaKnown RBP13.67□□□□□ -0.22
DDR1-262ENST00000508312 UBAP2Q5T6F2 1119 aaKnown RBP13.67□□□□□ -0.22
DDR1-262ENST00000508312 KRT79Q5XKE5 535 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 CDC42EP5Q6NZY7 148 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 ACTRT1Q8TDG2 376 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 DNAJC9Q8WXX5 260 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 RBM41Q96IZ5 413 aaKnown RBP13.67□□□□□ -0.22
DDR1-262ENST00000508312 GJD4Q96KN9 370 aaPredicted RBP13.67□□□□□ -0.22
DDR1-262ENST00000508312 RMDN2Q96LZ7 410 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 KLHL14Q9P2G3 628 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 WDR35Q9P2L0 1181 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 DDTLA6NHG4 134 aaPredicted RBP13.67□□□□□ -0.22
DDR1-262ENST00000508312 SP100P23497 879 aaPredicted RBP13.67□□□□□ -0.22
DDR1-262ENST00000508312 PSMC6P62333 389 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 AMPD3Q01432 767 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 TBC1D10BQ4KMP7 808 aaPredicted RBP13.67□□□□□ -0.22
DDR1-262ENST00000508312 HERC4Q5GLZ8 1057 aaPredicted RBP13.67□□□□□ -0.22
DDR1-262ENST00000508312 ZNF449Q6P9G9 518 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 UCMAQ8WVF2 138 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 HAS1Q92839 578 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 PABPC3Q9H361 631 aaKnown RBP13.67□□□□□ -0.22
DDR1-262ENST00000508312 RNPEPL1Q9HAU8 725 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 ARL2BPQ9Y2Y0 163 aa13.67□□□□□ -0.22
DDR1-262ENST00000508312 RASGRF2O14827 1237 aa13.66□□□□□ -0.22
DDR1-262ENST00000508312 ATP6V1C1P21283 382 aa13.66□□□□□ -0.22
DDR1-262ENST00000508312 CALB2P22676 271 aa13.66□□□□□ -0.22
DDR1-262ENST00000508312 ATP2B4P23634 1241 aa13.66□□□□□ -0.22
DDR1-262ENST00000508312 SHMT1P34896 483 aa13.66□□□□□ -0.22
DDR1-262ENST00000508312 SCNN1BP51168 640 aa13.66□□□□□ -0.22
DDR1-262ENST00000508312 DR1Q01658 176 aa13.66□□□□□ -0.22
DDR1-262ENST00000508312 TAOK1Q7L7X3 1001 aa13.66□□□□□ -0.22
DDR1-262ENST00000508312 FBXO25Q8TCJ0 367 aa13.66□□□□□ -0.22
DDR1-262ENST00000508312 RNF25Q96BH1 459 aaPredicted RBP13.66□□□□□ -0.22
DDR1-262ENST00000508312 SEMA4AQ9H3S1 761 aa13.66□□□□□ -0.22
DDR1-262ENST00000508312 DNAJC18Q9H819 358 aa13.66□□□□□ -0.22
DDR1-262ENST00000508312 NR2E1Q9Y466 385 aa13.66□□□□□ -0.22
DDR1-262ENST00000508312 DAAM1Q9Y4D1 1078 aa13.66□□□□□ -0.22
DDR1-262ENST00000508312 FOXO6A8MYZ6 492 aa13.66□□□□□ -0.22
DDR1-262ENST00000508312 PPFIA2O75334 1257 aa13.66□□□□□ -0.22
DDR1-262ENST00000508312 KCNMA1Q12791 1236 aa13.66□□□□□ -0.22
DDR1-262ENST00000508312 CNGA2Q16280 664 aa13.66□□□□□ -0.22
DDR1-262ENST00000508312 TMEM266Q2M3C6 531 aa13.66□□□□□ -0.22
DDR1-262ENST00000508312 DCAF17Q5H9S7 520 aaPredicted RBP13.66□□□□□ -0.22
DDR1-262ENST00000508312 SYCP3Q8IZU3 236 aa13.66□□□□□ -0.22
DDR1-262ENST00000508312 CERKQ8TCT0 537 aa13.66□□□□□ -0.22
DDR1-262ENST00000508312 SLITRK6Q9H5Y7 841 aa13.66□□□□□ -0.22
DDR1-262ENST00000508312 PSTPIP2Q9H939 334 aa13.66□□□□□ -0.22
DDR1-262ENST00000508312 PRDM16Q9HAZ2 1276 aa13.66□□□□□ -0.22
DDR1-262ENST00000508312 CEP72Q9P209 647 aa13.66□□□□□ -0.22
DDR1-262ENST00000508312 SCOCQ9UIL1 159 aa13.66□□□□□ -0.22
DDR1-262ENST00000508312 COL5A3P25940 1745 aaPredicted RBP13.66□□□□□ -0.22
DDR1-262ENST00000508312 ZBTB39O15060 712 aa13.65□□□□□ -0.22
DDR1-262ENST00000508312 CHMP2AO43633 222 aa13.65□□□□□ -0.22
DDR1-262ENST00000508312 NPTXRO95502 500 aa13.65□□□□□ -0.22
DDR1-262ENST00000508312 IL1R1P14778 569 aa13.65□□□□□ -0.22
DDR1-262ENST00000508312 TARSP26639 723 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms