RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 MYL1P05976 194 aa12.08□□□□□ -0.47
PROM1-207ENST00000508167 ZNF200P98182 395 aaPredicted RBP12.08□□□□□ -0.47
PROM1-207ENST00000508167 STK4Q13043 487 aa12.08□□□□□ -0.47
PROM1-207ENST00000508167 TFDP1Q14186 410 aa12.08□□□□□ -0.47
PROM1-207ENST00000508167 PTGISQ16647 500 aa12.08□□□□□ -0.47
PROM1-207ENST00000508167 ZBTB8OSQ8IWT0 167 aa12.08□□□□□ -0.47
PROM1-207ENST00000508167 NELFCDQ8IXH7 590 aa12.08□□□□□ -0.47
PROM1-207ENST00000508167 GLIS3Q8NEA6 775 aa12.08□□□□□ -0.47
PROM1-207ENST00000508167 DNM1LO00429 736 aa12.08□□□□□ -0.48
PROM1-207ENST00000508167 KIF20AO95235 890 aa12.08□□□□□ -0.48
PROM1-207ENST00000508167 ADKP55263 362 aaKnown RBP12.08□□□□□ -0.48
PROM1-207ENST00000508167 RNF149Q8NC42 400 aa12.08□□□□□ -0.48
PROM1-207ENST00000508167 HPS3Q969F9 1004 aa12.08□□□□□ -0.48
PROM1-207ENST00000508167 DNAJC19Q96DA6 116 aa12.08□□□□□ -0.48
PROM1-207ENST00000508167 FGFBP2Q9BYJ0 223 aa12.08□□□□□ -0.48
PROM1-207ENST00000508167 DACH1Q9UI36 760 aa12.08□□□□□ -0.48
PROM1-207ENST00000508167 A0A0U1RQG5 324 aaPredicted RBP12.08□□□□□ -0.48
PROM1-207ENST00000508167 A0A1W2PQ45 241 aaPredicted RBP12.08□□□□□ -0.48
PROM1-207ENST00000508167 A0A1W2PQY0 241 aa12.08□□□□□ -0.48
PROM1-207ENST00000508167 ABL1P00519 1130 aa12.08□□□□□ -0.48
PROM1-207ENST00000508167 VTNP04004 478 aa12.08□□□□□ -0.48
PROM1-207ENST00000508167 GAP43P17677 238 aa12.08□□□□□ -0.48
PROM1-207ENST00000508167 STRN3Q13033 797 aa12.08□□□□□ -0.48
PROM1-207ENST00000508167 UNC13DQ70J99 1090 aa12.08□□□□□ -0.48
PROM1-207ENST00000508167 DNAJB3Q8WWF6 145 aa12.08□□□□□ -0.48
PROM1-207ENST00000508167 PAWRQ96IZ0 340 aaKnown RBP12.08□□□□□ -0.48
PROM1-207ENST00000508167 UPF3AQ9H1J1 476 aaKnown RBP12.08□□□□□ -0.48
PROM1-207ENST00000508167 SEMA6BQ9H3T3 888 aa12.08□□□□□ -0.48
PROM1-207ENST00000508167 PRDM5Q9NQX1 630 aaPredicted RBP12.08□□□□□ -0.48
PROM1-207ENST00000508167 TRMT1Q9NXH9 659 aaKnown RBP12.08□□□□□ -0.48
PROM1-207ENST00000508167 KCND2Q9NZV8 630 aa12.08□□□□□ -0.48
PROM1-207ENST00000508167 ARID2Q68CP9 1835 aa12.08□□□□□ -0.48
PROM1-207ENST00000508167 TLR3O15455 904 aaKnown RBP12.08□□□□□ -0.48
PROM1-207ENST00000508167 SERPINC1P01008 464 aa12.08□□□□□ -0.48
PROM1-207ENST00000508167 RBL2Q08999 1139 aa12.08□□□□□ -0.48
PROM1-207ENST00000508167 PRPF31Q8WWY3 499 aaKnown RBP12.08□□□□□ -0.48
PROM1-207ENST00000508167 NELFBQ8WX92 580 aa12.08□□□□□ -0.48
PROM1-207ENST00000508167 KAT2BQ92831 832 aa12.08□□□□□ -0.48
PROM1-207ENST00000508167 ARMC5Q96C12 935 aa12.08□□□□□ -0.48
PROM1-207ENST00000508167 TSEN34Q9BSV6 310 aaKnown RBP12.08□□□□□ -0.48
PROM1-207ENST00000508167 NIFKQ9BYG3 293 aaKnown RBP12.08□□□□□ -0.48
PROM1-207ENST00000508167 PAK6Q9NQU5 681 aaPredicted RBP12.08□□□□□ -0.48
PROM1-207ENST00000508167 DCDC2CA8MYV0 355 aa12.07□□□□□ -0.48
PROM1-207ENST00000508167 SLC16A4O15374 487 aa12.07□□□□□ -0.48
PROM1-207ENST00000508167 TREHO43280 583 aa12.07□□□□□ -0.48
PROM1-207ENST00000508167 CBFA2T2O43439 604 aa12.07□□□□□ -0.48
PROM1-207ENST00000508167 CLSTN1O94985 981 aa12.07□□□□□ -0.48
PROM1-207ENST00000508167 COASYQ13057 564 aa12.07□□□□□ -0.48
PROM1-207ENST00000508167 GIT2Q14161 759 aa12.07□□□□□ -0.48
PROM1-207ENST00000508167 IER5Q5VY09 327 aa12.07□□□□□ -0.48
PROM1-207ENST00000508167 NECAB2Q7Z6G3 386 aa12.07□□□□□ -0.48
PROM1-207ENST00000508167 PANX2Q96RD6 677 aa12.07□□□□□ -0.48
PROM1-207ENST00000508167 KCNG1Q9UIX4 513 aa12.07□□□□□ -0.48
PROM1-207ENST00000508167 ODF2LQ9ULJ1 636 aa12.07□□□□□ -0.48
PROM1-207ENST00000508167 MFAP3LO75121 409 aa12.07□□□□□ -0.48
PROM1-207ENST00000508167 SFPQP23246 707 aaKnown RBP eCLIP12.07□□□□□ -0.48
PROM1-207ENST00000508167 THPOP40225 353 aa12.07□□□□□ -0.48
PROM1-207ENST00000508167 NLRP11P59045 1033 aaKnown RBP12.07□□□□□ -0.48
PROM1-207ENST00000508167 ZCWPW2Q504Y3 356 aa12.07□□□□□ -0.48
PROM1-207ENST00000508167 MTHFD1LQ6UB35 978 aa12.07□□□□□ -0.48
PROM1-207ENST00000508167 C1orf186Q6ZWK4 172 aa12.07□□□□□ -0.48
PROM1-207ENST00000508167 KLHDC9Q8NEP7 349 aa12.07□□□□□ -0.48
PROM1-207ENST00000508167 REXO2Q9Y3B8 237 aaKnown RBP12.07□□□□□ -0.48
PROM1-207ENST00000508167 THSD7BQ9C0I4 1608 aa12.07□□□□□ -0.48
PROM1-207ENST00000508167 SYCP1Q15431 976 aa12.07□□□□□ -0.48
PROM1-207ENST00000508167 ZNF236Q9UL36 1845 aa12.06□□□□□ -0.48
PROM1-207ENST00000508167 PVALEFA0A1B0GWK0 134 aa12.06□□□□□ -0.48
PROM1-207ENST00000508167 PSMA7O14818 248 aa12.06□□□□□ -0.48
PROM1-207ENST00000508167 PAK1Q13153 545 aa12.06□□□□□ -0.48
PROM1-207ENST00000508167 MXD4Q14582 209 aaPredicted RBP12.06□□□□□ -0.48
PROM1-207ENST00000508167 KIZQ2M2Z5 673 aa12.06□□□□□ -0.48
PROM1-207ENST00000508167 KSR1Q8IVT5 923 aa12.06□□□□□ -0.48
PROM1-207ENST00000508167 KIFC3Q9BVG8 833 aa12.06□□□□□ -0.48
PROM1-207ENST00000508167 TRMT13Q9NUP7 481 aaKnown RBP12.06□□□□□ -0.48
PROM1-207ENST00000508167 PRKAG2Q9UGJ0 569 aa12.06□□□□□ -0.48
PROM1-207ENST00000508167 PCDHB13Q9Y5F0 798 aa12.06□□□□□ -0.48
PROM1-207ENST00000508167 FRMD3A2A2Y4 597 aa12.06□□□□□ -0.48
PROM1-207ENST00000508167 STX10O60499 249 aa12.06□□□□□ -0.48
PROM1-207ENST00000508167 MAFO75444 373 aaPredicted RBP12.06□□□□□ -0.48
PROM1-207ENST00000508167 HARSP12081 509 aaKnown RBP12.06□□□□□ -0.48
PROM1-207ENST00000508167 GUCY2CP25092 1073 aa12.06□□□□□ -0.48
PROM1-207ENST00000508167 CST5P28325 142 aaPredicted RBP12.06□□□□□ -0.48
PROM1-207ENST00000508167 NFX1Q12986 1120 aaKnown RBP12.06□□□□□ -0.48
PROM1-207ENST00000508167 TIPINQ9BVW5 301 aa12.06□□□□□ -0.48
PROM1-207ENST00000508167 K7ERI5 159 aa12.06□□□□□ -0.48
PROM1-207ENST00000508167 GAS2O43903 313 aaKnown RBP12.06□□□□□ -0.48
PROM1-207ENST00000508167 NMT1P30419 496 aaKnown RBP12.06□□□□□ -0.48
PROM1-207ENST00000508167 RBM10P98175 930 aaKnown RBP12.06□□□□□ -0.48
PROM1-207ENST00000508167 ANKRD40Q6AI12 368 aa12.06□□□□□ -0.48
PROM1-207ENST00000508167 DPY19L2P1Q6NXN4 242 aa12.06□□□□□ -0.48
PROM1-207ENST00000508167 WDR59Q6PJI9 974 aa12.06□□□□□ -0.48
PROM1-207ENST00000508167 ZC3H3Q8IXZ2 948 aaKnown RBP12.06□□□□□ -0.48
PROM1-207ENST00000508167 DOCK5Q9H7D0 1870 aa12.06□□□□□ -0.48
PROM1-207ENST00000508167 SOWAHDA6NJG2 315 aa12.05□□□□□ -0.48
PROM1-207ENST00000508167 PES1O00541 588 aaKnown RBP12.05□□□□□ -0.48
PROM1-207ENST00000508167 ERLIN2O94905 339 aa12.05□□□□□ -0.48
PROM1-207ENST00000508167 PLS3P13797 630 aa12.05□□□□□ -0.48
PROM1-207ENST00000508167 ARSHQ5FYA8 562 aa12.05□□□□□ -0.48
PROM1-207ENST00000508167 CENPPQ6IPU0 288 aa12.05□□□□□ -0.48
PROM1-207ENST00000508167 TAF2Q6P1X5 1199 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms