RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 GPATCH4Q5T3I0 446 aaKnown RBP5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 DUPD1Q68J44 220 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 CEP128Q6ZU80 1094 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 C15orf52Q6ZUT6 534 aaKnown RBP5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 USP17L1Q7RTZ2 530 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 ZNF571Q7Z3V5 609 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 TMC4Q7Z404 712 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 IRF2BP2Q7Z5L9 587 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 PIGWQ7Z7B1 504 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 NT5DC3Q86UY8 548 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 APLFQ8IW19 511 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 RHOT2Q8IXI1 618 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 SH3RF3Q8TEJ3 882 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 HPS1Q92902 700 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 FOXJ1Q92949 421 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 HPS3Q969F9 1004 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 DYNLL2Q96FJ2 89 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 ERP44Q9BS26 406 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 MKNK1Q9BUB5 465 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 PLVAPQ9BX97 442 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 AP1M1Q9BXS5 423 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 DDX47Q9H0S4 455 aaKnown RBP5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 KCTD10Q9H3F6 313 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 CD248Q9HCU0 757 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 TYW1Q9NV66 732 aaKnown RBP5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 INTS9Q9NV88 658 aaKnown RBP5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 HAUS2Q9NVX0 235 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 BTG4Q9NY30 223 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 MTUS1Q9ULD2 1270 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 NENFQ9UMX5 172 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 SLC12A4Q9UP95 1085 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 DNM3Q9UQ16 869 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 STXBP5LQ9Y2K9 1186 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 THRAP3Q9Y2W1 955 aaKnown RBP5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 UBE4BO95155 1302 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 MYO3BQ8WXR4 1341 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 COL14A1Q05707 1796 aaKnown RBP5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 ATAD5Q96QE3 1844 aa5.37□□□□□ -1.55
HMGB3P16-201ENST00000508037 DNM1LO00429 736 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 LIN7AO14910 233 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 EIF3DO15371 548 aaKnown RBP eCLIP5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 TTI1O43156 1089 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 PPIP5K2O43314 1243 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 SLC37A4O43826 429 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 PHF2O75151 1096 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 ATP5HO75947 161 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 SUN1O94901 812 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 TDP2O95551 362 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 ATP6V1G2O95670 118 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 FGGP02679 453 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 GOLGA8HP0CJ92 632 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 CHN1P15882 459 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 CYP11B2P19099 503 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 CCND1P24385 295 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 PON1P27169 355 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 TMOD1P28289 359 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 MAN1A1P33908 653 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 SOX5P35711 763 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 PSMC2P35998 433 aaKnown RBP5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 HADHBP55084 474 aaKnown RBP5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 JAM2P57087 298 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 IRX1P78414 480 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 ELF3P78545 371 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 LACTBP83111 547 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 ATP2B2Q01814 1243 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 MAP2K1Q02750 393 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 CETN1Q12798 172 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 TRAF1Q13077 416 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 MAPK7Q13164 816 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 AP3B2Q13367 1082 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 TCEAL1Q15170 157 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 EPHA7Q15375 998 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 PPP1R7Q15435 360 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 ENOX2Q16206 610 aaKnown RBP5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 BMT2Q1RMZ1 405 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 KIAA1755Q5JYT7 1200 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 SEL1L2Q5TEA6 688 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 C11orf63Q6NUN7 778 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 TPTE2Q6XPS3 522 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 SYDE1Q6ZW31 735 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 TRMT10CQ7L0Y3 403 aaKnown RBP5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 CYFIP1Q7L576 1253 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 TRPM8Q7Z2W7 1104 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 NBPF5PQ86XG9 351 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 NELFCDQ8IXH7 590 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 MAB21L3Q8N8X9 362 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 BANK1Q8NDB2 785 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 U2AF1L4Q8WU68 220 aaKnown RBP5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 TBC1D22AQ8WUA7 517 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 TGFBRAP1Q8WUH2 860 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 LRRN4Q8WUT4 740 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 SCFD1Q8WVM8 642 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 MAIP1Q8WWC4 291 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 ATXN2LQ8WWM7 1075 aaKnown RBP5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 CELF1Q92879 486 aaKnown RBP5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 MIEF2Q96C03 454 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 GRAMD1AQ96CP6 724 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 RAB3IPQ96QF0 476 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 SETDB2Q96T68 719 aa5.36□□□□□ -1.55
HMGB3P16-201ENST00000508037 SELENOSQ9BQE4 189 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms