RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 IGKV6D-21A0A0A0MT36 114 aa19.22■□□□□ 0.67
SFXN1-208ENST00000507823 ALDH5A1P51649 535 aaPredicted RBP19.22■□□□□ 0.67
SFXN1-208ENST00000507823 EPC2Q52LR7 807 aa19.22■□□□□ 0.67
SFXN1-208ENST00000507823 CNKSR2Q8WXI2 1034 aa19.22■□□□□ 0.67
SFXN1-208ENST00000507823 BSNDQ8WZ55 320 aa19.22■□□□□ 0.67
SFXN1-208ENST00000507823 FBXL18Q96ME1 805 aa19.22■□□□□ 0.67
SFXN1-208ENST00000507823 RNF181Q9P0P0 153 aa19.22■□□□□ 0.67
SFXN1-208ENST00000507823 DNAJC12Q9UKB3 198 aa19.22■□□□□ 0.67
SFXN1-208ENST00000507823 KCNH4Q9UQ05 1017 aa19.22■□□□□ 0.67
SFXN1-208ENST00000507823 TELO2Q9Y4R8 837 aa19.22■□□□□ 0.67
SFXN1-208ENST00000507823 MAFBQ9Y5Q3 323 aaPredicted RBP19.22■□□□□ 0.67
SFXN1-208ENST00000507823 PDE2AO00408 941 aaPredicted RBP19.22■□□□□ 0.67
SFXN1-208ENST00000507823 ADSSP30520 456 aa19.22■□□□□ 0.67
SFXN1-208ENST00000507823 ABCD1P33897 745 aa19.22■□□□□ 0.67
SFXN1-208ENST00000507823 SP2Q02086 613 aa19.22■□□□□ 0.67
SFXN1-208ENST00000507823 KIAA0753Q2KHM9 967 aa19.22■□□□□ 0.67
SFXN1-208ENST00000507823 XKR3Q5GH77 459 aa19.22■□□□□ 0.67
SFXN1-208ENST00000507823 DLK2Q6UY11 383 aa19.22■□□□□ 0.67
SFXN1-208ENST00000507823 ERO1BQ86YB8 467 aa19.22■□□□□ 0.67
SFXN1-208ENST00000507823 L3MBTL3Q96JM7 780 aaPredicted RBP19.22■□□□□ 0.67
SFXN1-208ENST00000507823 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.22■□□□□ 0.67
SFXN1-208ENST00000507823 ARFGAP3Q9NP61 516 aa19.22■□□□□ 0.67
SFXN1-208ENST00000507823 CYP26B1Q9NR63 512 aa19.22■□□□□ 0.67
SFXN1-208ENST00000507823 SPDYE5A6NIY4 337 aa19.21■□□□□ 0.67
SFXN1-208ENST00000507823 SPDYE4A6NLX3 237 aa19.21■□□□□ 0.67
SFXN1-208ENST00000507823 PRKCEQ02156 737 aa19.21■□□□□ 0.67
SFXN1-208ENST00000507823 ANKRD13CQ8N6S4 541 aa19.21■□□□□ 0.67
SFXN1-208ENST00000507823 PLEKHO2Q8TD55 490 aa19.21■□□□□ 0.67
SFXN1-208ENST00000507823 OSBPL9Q96SU4 736 aa19.21■□□□□ 0.67
SFXN1-208ENST00000507823 SPATC1LQ9H0A9 340 aa19.21■□□□□ 0.67
SFXN1-208ENST00000507823 SYNGAP1Q96PV0 1343 aa19.21■□□□□ 0.67
SFXN1-208ENST00000507823 TARSL2A2RTX5 802 aaKnown RBP19.21■□□□□ 0.67
SFXN1-208ENST00000507823 TBC1D8O95759 1140 aa19.21■□□□□ 0.67
SFXN1-208ENST00000507823 SCP2P22307 547 aa19.21■□□□□ 0.67
SFXN1-208ENST00000507823 PPP3CAQ08209 521 aa19.21■□□□□ 0.67
SFXN1-208ENST00000507823 DRAP1Q14919 205 aaPredicted RBP19.21■□□□□ 0.67
SFXN1-208ENST00000507823 KRT222Q8N1A0 295 aa19.21■□□□□ 0.67
SFXN1-208ENST00000507823 PACSIN1Q9BY11 444 aa19.21■□□□□ 0.67
SFXN1-208ENST00000507823 PCIF1Q9H4Z3 704 aa19.21■□□□□ 0.67
SFXN1-208ENST00000507823 KCNG1Q9UIX4 513 aa19.21■□□□□ 0.67
SFXN1-208ENST00000507823 SIP14410 1827 aa19.21■□□□□ 0.67
SFXN1-208ENST00000507823 A0A0A6YYK5 440 aaPredicted RBP19.21■□□□□ 0.66
SFXN1-208ENST00000507823 DDX3XO00571 662 aaKnown RBP eCLIP19.21■□□□□ 0.661e-17■■■□□ 15.1
SFXN1-208ENST00000507823 EVI5O60447 810 aa19.21■□□□□ 0.66
SFXN1-208ENST00000507823 CNMDO75829 334 aa19.21■□□□□ 0.66
SFXN1-208ENST00000507823 DLG4P78352 724 aa19.21■□□□□ 0.66
SFXN1-208ENST00000507823 CNTN2Q02246 1040 aa19.21■□□□□ 0.66
SFXN1-208ENST00000507823 ALKBH5Q6P6C2 394 aaKnown RBP19.21■□□□□ 0.66
SFXN1-208ENST00000507823 VPS36Q86VN1 386 aa19.21■□□□□ 0.66
SFXN1-208ENST00000507823 ZC3H15Q8WU90 426 aaKnown RBP19.21■□□□□ 0.66
SFXN1-208ENST00000507823 KMT5AQ9NQR1 393 aa19.21■□□□□ 0.66
SFXN1-208ENST00000507823 EMSYQ7Z589 1322 aa19.2■□□□□ 0.66
SFXN1-208ENST00000507823 ZNF185O15231 689 aa19.2■□□□□ 0.66
SFXN1-208ENST00000507823 PHLDB3Q6NSJ2 640 aa19.2■□□□□ 0.66
SFXN1-208ENST00000507823 ANKRD13AQ8IZ07 590 aa19.2■□□□□ 0.66
SFXN1-208ENST00000507823 ANKRD35Q8N283 1001 aa19.2■□□□□ 0.66
SFXN1-208ENST00000507823 ARID3AQ99856 593 aa19.2■□□□□ 0.66
SFXN1-208ENST00000507823 ATP6V0A4Q9HBG4 840 aa19.2■□□□□ 0.66
SFXN1-208ENST00000507823 ARHGAP28Q9P2N2 729 aa19.2■□□□□ 0.66
SFXN1-208ENST00000507823 RNF14Q9UBS8 474 aa19.2■□□□□ 0.66
SFXN1-208ENST00000507823 ANKRD63C9JTQ0 380 aa19.2■□□□□ 0.66
SFXN1-208ENST00000507823 ADRB2P07550 413 aa19.2■□□□□ 0.66
SFXN1-208ENST00000507823 ATP4AP20648 1035 aa19.2■□□□□ 0.66
SFXN1-208ENST00000507823 KIF22Q14807 665 aa19.2■□□□□ 0.66
SFXN1-208ENST00000507823 USP50Q70EL3 339 aaPredicted RBP19.2■□□□□ 0.66
SFXN1-208ENST00000507823 MMGT1Q8N4V1 131 aa19.2■□□□□ 0.66
SFXN1-208ENST00000507823 MSL3Q8N5Y2 521 aaKnown RBP19.2■□□□□ 0.66
SFXN1-208ENST00000507823 CEP89Q96ST8 783 aa19.2■□□□□ 0.66
SFXN1-208ENST00000507823 ADGRA3Q8IWK6 1321 aa19.19■□□□□ 0.66
SFXN1-208ENST00000507823 DENND3A2RUS2 1198 aa19.19■□□□□ 0.66
SFXN1-208ENST00000507823 SOWAHBA6NEL2 793 aa19.19■□□□□ 0.66
SFXN1-208ENST00000507823 H0YCG3 227 aa19.19■□□□□ 0.66
SFXN1-208ENST00000507823 BUB1O43683 1085 aa19.19■□□□□ 0.66
SFXN1-208ENST00000507823 SEC31AO94979 1220 aaKnown RBP19.19■□□□□ 0.66
SFXN1-208ENST00000507823 CCDC172P0C7W6 258 aa19.19■□□□□ 0.66
SFXN1-208ENST00000507823 CNGA1P29973 690 aa19.19■□□□□ 0.66
SFXN1-208ENST00000507823 CBX1P83916 185 aa19.19■□□□□ 0.66
SFXN1-208ENST00000507823 FSTL1Q12841 308 aa19.19■□□□□ 0.66
SFXN1-208ENST00000507823 BEND6Q5SZJ8 279 aaPredicted RBP19.19■□□□□ 0.66
SFXN1-208ENST00000507823 MEI1Q5TIA1 1274 aa19.19■□□□□ 0.66
SFXN1-208ENST00000507823 SLC39A4Q6P5W5 647 aa19.19■□□□□ 0.66
SFXN1-208ENST00000507823 RDH13Q8NBN7 331 aa19.19■□□□□ 0.66
SFXN1-208ENST00000507823 TMC2Q8TDI7 906 aa19.19■□□□□ 0.66
SFXN1-208ENST00000507823 COG1Q8WTW3 980 aa19.19■□□□□ 0.66
SFXN1-208ENST00000507823 UBXN6Q9BZV1 441 aa19.19■□□□□ 0.66
SFXN1-208ENST00000507823 COQ4Q9Y3A0 265 aa19.19■□□□□ 0.66
SFXN1-208ENST00000507823 CCDC169A6NNP5 214 aa19.19■□□□□ 0.66
SFXN1-208ENST00000507823 CETN1Q12798 172 aa19.19■□□□□ 0.66
SFXN1-208ENST00000507823 PPIL2Q13356 520 aa19.19■□□□□ 0.66
SFXN1-208ENST00000507823 MOGSQ13724 837 aa19.19■□□□□ 0.66
SFXN1-208ENST00000507823 ZSWIM2Q8NEG5 633 aa19.19■□□□□ 0.66
SFXN1-208ENST00000507823 LNX1Q8TBB1 728 aaPredicted RBP19.19■□□□□ 0.66
SFXN1-208ENST00000507823 MFSD14AQ96MC6 490 aa19.19■□□□□ 0.66
SFXN1-208ENST00000507823 FUT8Q9BYC5 575 aa19.19■□□□□ 0.66
SFXN1-208ENST00000507823 NIFKQ9BYG3 293 aaKnown RBP19.19■□□□□ 0.66
SFXN1-208ENST00000507823 GRID2IPA4D2P6 1211 aa19.18■□□□□ 0.66
SFXN1-208ENST00000507823 PALMO75781 387 aa19.18■□□□□ 0.66
SFXN1-208ENST00000507823 GARTP22102 1010 aa19.18■□□□□ 0.66
SFXN1-208ENST00000507823 COPB2P35606 906 aa19.18■□□□□ 0.66
SFXN1-208ENST00000507823 LONRF2Q1L5Z9 754 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms