RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 HOXD13P35453 343 aa19.19■□□□□ 0.66
RNF4-209ENST00000507784 ADAM17P78536 824 aa19.19■□□□□ 0.66
RNF4-209ENST00000507784 LRRC63Q05C16 580 aa19.19■□□□□ 0.66
RNF4-209ENST00000507784 TTI2Q6NXR4 508 aa19.19■□□□□ 0.66
RNF4-209ENST00000507784 CSGALNACT2Q8N6G5 542 aa19.19■□□□□ 0.66
RNF4-209ENST00000507784 DNAJB3Q8WWF6 145 aa19.19■□□□□ 0.66
RNF4-209ENST00000507784 NLRP7Q8WX94 980 aa19.19■□□□□ 0.66
RNF4-209ENST00000507784 BICD1Q96G01 975 aa19.19■□□□□ 0.66
RNF4-209ENST00000507784 ZNF333Q96JL9 665 aa19.19■□□□□ 0.66
RNF4-209ENST00000507784 DUSP9Q99956 384 aaKnown RBP19.19■□□□□ 0.66
RNF4-209ENST00000507784 C2orf40Q9H1Z8 148 aa19.19■□□□□ 0.66
RNF4-209ENST00000507784 IKZF4Q9H2S9 585 aa19.19■□□□□ 0.66
RNF4-209ENST00000507784 STARD7Q9NQZ5 370 aa19.19■□□□□ 0.66
RNF4-209ENST00000507784 SAMSN1Q9NSI8 373 aaKnown RBP19.19■□□□□ 0.66
RNF4-209ENST00000507784 TYW1Q9NV66 732 aaKnown RBP19.19■□□□□ 0.66
RNF4-209ENST00000507784 PHF24Q9UPV7 400 aa19.19■□□□□ 0.66
RNF4-209ENST00000507784 ADGRA3Q8IWK6 1321 aa19.19■□□□□ 0.66
RNF4-209ENST00000507784 A0A087WZ62 844 aa19.18■□□□□ 0.66
RNF4-209ENST00000507784 PDXKO00764 312 aa19.18■□□□□ 0.66
RNF4-209ENST00000507784 CLIC2O15247 247 aa19.18■□□□□ 0.66
RNF4-209ENST00000507784 FGFR1OPO95684 399 aaKnown RBP19.18■□□□□ 0.66
RNF4-209ENST00000507784 TMEM62Q0P6H9 643 aa19.18■□□□□ 0.66
RNF4-209ENST00000507784 HS2ST1Q7LGA3 356 aa19.18■□□□□ 0.66
RNF4-209ENST00000507784 NOC3LQ8WTT2 800 aaKnown RBP19.18■□□□□ 0.66
RNF4-209ENST00000507784 FDXACB1Q9BRP7 624 aaPredicted RBP19.18■□□□□ 0.66
RNF4-209ENST00000507784 GBP3Q9H0R5 595 aa19.18■□□□□ 0.66
RNF4-209ENST00000507784 TMEM134Q9H6X4 195 aa19.18■□□□□ 0.66
RNF4-209ENST00000507784 ARHGAP28Q9P2N2 729 aa19.18■□□□□ 0.66
RNF4-209ENST00000507784 OGDHLQ9ULD0 1010 aa19.18■□□□□ 0.66
RNF4-209ENST00000507784 GRIN2DO15399 1336 aa19.18■□□□□ 0.66
RNF4-209ENST00000507784 DNM1LO00429 736 aa19.17■□□□□ 0.66
RNF4-209ENST00000507784 PHKA2P46019 1235 aa19.17■□□□□ 0.66
RNF4-209ENST00000507784 EFNA5P52803 228 aa19.17■□□□□ 0.66
RNF4-209ENST00000507784 NLRP11P59045 1033 aaKnown RBP19.17■□□□□ 0.66
RNF4-209ENST00000507784 PTGISQ16647 500 aa19.17■□□□□ 0.66
RNF4-209ENST00000507784 PPP4R3CPQ6ZMV5 832 aa19.17■□□□□ 0.66
RNF4-209ENST00000507784 SESTD1Q86VW0 696 aa19.17■□□□□ 0.66
RNF4-209ENST00000507784 ARMC5Q96C12 935 aa19.17■□□□□ 0.66
RNF4-209ENST00000507784 MAGEC2Q9UBF1 373 aaPredicted RBP19.17■□□□□ 0.66
RNF4-209ENST00000507784 NOD1Q9Y239 953 aa19.17■□□□□ 0.66
RNF4-209ENST00000507784 GINS2Q9Y248 185 aa19.17■□□□□ 0.66
RNF4-209ENST00000507784 A0A0U1RQG5 324 aaPredicted RBP19.16■□□□□ 0.66
RNF4-209ENST00000507784 INO80B-WBP1J3KQ70 363 aa19.16■□□□□ 0.66
RNF4-209ENST00000507784 TGFB1I1O43294 461 aa19.16■□□□□ 0.66
RNF4-209ENST00000507784 SGPL1O95470 568 aa19.16■□□□□ 0.66
RNF4-209ENST00000507784 SCP2P22307 547 aa19.16■□□□□ 0.66
RNF4-209ENST00000507784 RPL13P26373 211 aaKnown RBP19.16■□□□□ 0.66
RNF4-209ENST00000507784 HOXC8P31273 242 aa19.16■□□□□ 0.66
RNF4-209ENST00000507784 GPC3P51654 580 aa19.16■□□□□ 0.66
RNF4-209ENST00000507784 PTPN11Q06124 597 aaPredicted RBP19.16■□□□□ 0.66
RNF4-209ENST00000507784 ADAM9Q13443 819 aa19.16■□□□□ 0.66
RNF4-209ENST00000507784 TMEM132AQ24JP5 1023 aa19.16■□□□□ 0.66
RNF4-209ENST00000507784 EEF2KMTQ96G04 330 aa19.16■□□□□ 0.66
RNF4-209ENST00000507784 INO80BQ9C086 356 aaPredicted RBP19.16■□□□□ 0.66
RNF4-209ENST00000507784 THAP9Q9H5L6 903 aa19.16■□□□□ 0.66
RNF4-209ENST00000507784 TRAF3IP3Q9Y228 551 aa19.16■□□□□ 0.66
RNF4-209ENST00000507784 PHLPP2Q6ZVD8 1323 aa19.16■□□□□ 0.66
RNF4-209ENST00000507784 ZMYM2Q9UBW7 1377 aa19.16■□□□□ 0.66
RNF4-209ENST00000507784 SIP14410 1827 aa19.16■□□□□ 0.66
RNF4-209ENST00000507784 CETN3O15182 167 aa19.15■□□□□ 0.66
RNF4-209ENST00000507784 NR3C1P04150 777 aa19.15■□□□□ 0.66
RNF4-209ENST00000507784 PRKCBP05771 671 aa19.15■□□□□ 0.66
RNF4-209ENST00000507784 LIG4P49917 911 aa19.15■□□□□ 0.66
RNF4-209ENST00000507784 PTENP60484 403 aa19.15■□□□□ 0.66
RNF4-209ENST00000507784 CDC42EP1Q00587 391 aa19.15■□□□□ 0.66
RNF4-209ENST00000507784 FKBP3Q00688 224 aaKnown RBP19.15■□□□□ 0.66
RNF4-209ENST00000507784 MAPK6Q16659 721 aa19.15■□□□□ 0.66
RNF4-209ENST00000507784 KIZQ2M2Z5 673 aa19.15■□□□□ 0.66
RNF4-209ENST00000507784 EDRF1Q3B7T1 1238 aa19.15■□□□□ 0.66
RNF4-209ENST00000507784 ZCWPW2Q504Y3 356 aa19.15■□□□□ 0.66
RNF4-209ENST00000507784 CDCA2Q69YH5 1023 aaPredicted RBP19.15■□□□□ 0.66
RNF4-209ENST00000507784 TAF2Q6P1X5 1199 aa19.15■□□□□ 0.66
RNF4-209ENST00000507784 TAS1R3Q7RTX0 852 aa19.15■□□□□ 0.66
RNF4-209ENST00000507784 RSPH3Q86UC2 560 aa19.15■□□□□ 0.66
RNF4-209ENST00000507784 MAP4K3Q8IVH8 894 aa19.15■□□□□ 0.66
RNF4-209ENST00000507784 FAM114A1Q8IWE2 563 aa19.15■□□□□ 0.66
RNF4-209ENST00000507784 NME8Q8N427 588 aa19.15■□□□□ 0.66
RNF4-209ENST00000507784 GOLGA5Q8TBA6 731 aa19.15■□□□□ 0.66
RNF4-209ENST00000507784 U2AF1L4Q8WU68 220 aaKnown RBP19.15■□□□□ 0.66
RNF4-209ENST00000507784 GCOM2Q9BZD3 368 aaPredicted RBP19.15■□□□□ 0.66
RNF4-209ENST00000507784 PRDM10Q9NQV6 1147 aa19.15■□□□□ 0.66
RNF4-209ENST00000507784 USP20Q9Y2K6 914 aa19.15■□□□□ 0.66
RNF4-209ENST00000507784 KCNJ18B7U540 433 aa19.14■□□□□ 0.65
RNF4-209ENST00000507784 ANKRD63C9JTQ0 380 aa19.14■□□□□ 0.65
RNF4-209ENST00000507784 M0QZ92 97 aa19.14■□□□□ 0.65
RNF4-209ENST00000507784 SERPINC1P01008 464 aa19.14■□□□□ 0.65
RNF4-209ENST00000507784 ATP1A3P13637 1013 aa19.14■□□□□ 0.65
RNF4-209ENST00000507784 NR2F2P24468 414 aa19.14■□□□□ 0.65
RNF4-209ENST00000507784 MATR3P43243 847 aaKnown RBP eCLIP19.14■□□□□ 0.65
RNF4-209ENST00000507784 CYP2J2P51589 502 aa19.14■□□□□ 0.65
RNF4-209ENST00000507784 POU5F1BQ06416 359 aa19.14■□□□□ 0.65
RNF4-209ENST00000507784 KCNJ12Q14500 433 aa19.14■□□□□ 0.65
RNF4-209ENST00000507784 ZNF410Q86VK4 478 aa19.14■□□□□ 0.65
RNF4-209ENST00000507784 ANKRD20A12PQ8NF67 263 aa19.14■□□□□ 0.65
RNF4-209ENST00000507784 ANP32BQ92688 251 aaKnown RBP19.14■□□□□ 0.65
RNF4-209ENST00000507784 TMEM106CQ9BVX2 250 aa19.14■□□□□ 0.65
RNF4-209ENST00000507784 SENP6Q9GZR1 1112 aaPredicted RBP19.14■□□□□ 0.65
RNF4-209ENST00000507784 HSD3B7Q9H2F3 369 aa19.14■□□□□ 0.65
RNF4-209ENST00000507784 PCIF1Q9H4Z3 704 aa19.14■□□□□ 0.65
RNF4-209ENST00000507784 AGPAT3Q9NRZ7 376 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms