RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 FRMD3A2A2Y4 597 aa22.13■■□□□ 1.13
USP53-203ENST00000507597 INO80B-WBP1J3KQ70 363 aa22.13■■□□□ 1.13
USP53-203ENST00000507597 EFCAB14O75071 495 aa22.13■■□□□ 1.13
USP53-203ENST00000507597 AXLP30530 894 aa22.13■■□□□ 1.13
USP53-203ENST00000507597 CUL4BQ13620 913 aa22.13■■□□□ 1.13
USP53-203ENST00000507597 CDCA2Q69YH5 1023 aaPredicted RBP22.13■■□□□ 1.13
USP53-203ENST00000507597 SMARCE1Q969G3 411 aa22.13■■□□□ 1.13
USP53-203ENST00000507597 PRIMPOLQ96LW4 560 aa22.13■■□□□ 1.13
USP53-203ENST00000507597 GSDMAQ96QA5 445 aa22.13■■□□□ 1.13
USP53-203ENST00000507597 BLZF1Q9H2G9 400 aa22.13■■□□□ 1.13
USP53-203ENST00000507597 MRPL44Q9H9J2 332 aaKnown RBP22.13■■□□□ 1.13
USP53-203ENST00000507597 RPN1P04843 607 aaKnown RBP22.12■■□□□ 1.13
USP53-203ENST00000507597 GHRP10912 638 aa22.12■■□□□ 1.13
USP53-203ENST00000507597 ZSCAN20P17040 1043 aaPredicted RBP22.12■■□□□ 1.13
USP53-203ENST00000507597 KCNB1Q14721 858 aa22.12■■□□□ 1.13
USP53-203ENST00000507597 CATSPER4Q7RTX7 472 aa22.12■■□□□ 1.13
USP53-203ENST00000507597 APBB1IPQ7Z5R6 666 aaPredicted RBP22.12■■□□□ 1.13
USP53-203ENST00000507597 BADQ92934 168 aa22.12■■□□□ 1.13
USP53-203ENST00000507597 HVCN1Q96D96 273 aa22.12■■□□□ 1.13
USP53-203ENST00000507597 SCLYQ96I15 445 aa22.12■■□□□ 1.13
USP53-203ENST00000507597 IFIH1Q9BYX4 1025 aaKnown RBP22.12■■□□□ 1.13
USP53-203ENST00000507597 WNT8AQ9H1J5 351 aa22.12■■□□□ 1.13
USP53-203ENST00000507597 NUP62CLQ9H1M0 184 aa22.12■■□□□ 1.13
USP53-203ENST00000507597 MTIF3Q9H2K0 278 aaKnown RBP22.12■■□□□ 1.13
USP53-203ENST00000507597 IFT122Q9HBG6 1241 aa22.12■■□□□ 1.13
USP53-203ENST00000507597 POLD4Q9HCU8 107 aa22.12■■□□□ 1.13
USP53-203ENST00000507597 IL23AQ9NPF7 189 aa22.12■■□□□ 1.13
USP53-203ENST00000507597 UMODL1Q5DID0 1318 aa22.11■■□□□ 1.13
USP53-203ENST00000507597 K7ENM7 598 aa22.11■■□□□ 1.13
USP53-203ENST00000507597 CXCL10P02778 98 aa22.11■■□□□ 1.13
USP53-203ENST00000507597 SYN1P17600 705 aa22.11■■□□□ 1.13
USP53-203ENST00000507597 NCKAP1LP55160 1127 aa22.11■■□□□ 1.13
USP53-203ENST00000507597 DPYDQ12882 1025 aa22.11■■□□□ 1.13
USP53-203ENST00000507597 NFX1Q12986 1120 aaKnown RBP22.11■■□□□ 1.13
USP53-203ENST00000507597 COASYQ13057 564 aa22.11■■□□□ 1.13
USP53-203ENST00000507597 TMEM132AQ24JP5 1023 aa22.11■■□□□ 1.13
USP53-203ENST00000507597 TRAF7Q6Q0C0 670 aa22.11■■□□□ 1.13
USP53-203ENST00000507597 SFR1Q86XK3 245 aa22.11■■□□□ 1.13
USP53-203ENST00000507597 GRAMD1CQ8IYS0 662 aa22.11■■□□□ 1.13
USP53-203ENST00000507597 KCNN1Q92952 543 aa22.11■■□□□ 1.13
USP53-203ENST00000507597 ST6GALNAC4Q9H4F1 302 aa22.11■■□□□ 1.13
USP53-203ENST00000507597 CHST12Q9NRB3 414 aa22.11■■□□□ 1.13
USP53-203ENST00000507597 ARHGAP28Q9P2N2 729 aa22.11■■□□□ 1.13
USP53-203ENST00000507597 EXOC7Q9UPT5 735 aa22.11■■□□□ 1.13
USP53-203ENST00000507597 SLC16A4O15374 487 aa22.1■■□□□ 1.13
USP53-203ENST00000507597 CSF2RAP15509 400 aa22.1■■□□□ 1.13
USP53-203ENST00000507597 MDM2Q00987 491 aaPredicted RBP22.1■■□□□ 1.13
USP53-203ENST00000507597 LPIN1Q14693 890 aa22.1■■□□□ 1.13
USP53-203ENST00000507597 FAM187BQ17R55 369 aa22.1■■□□□ 1.13
USP53-203ENST00000507597 FAM26FQ5R3K3 315 aa22.1■■□□□ 1.13
USP53-203ENST00000507597 CNKSR3Q6P9H4 555 aa22.1■■□□□ 1.13
USP53-203ENST00000507597 PSRC1Q6PGN9 363 aaPredicted RBP22.1■■□□□ 1.13
USP53-203ENST00000507597 HAUS6Q7Z4H7 955 aa22.1■■□□□ 1.13
USP53-203ENST00000507597 BSNDQ8WZ55 320 aa22.1■■□□□ 1.13
USP53-203ENST00000507597 ZNF668Q96K58 619 aaPredicted RBP22.1■■□□□ 1.13
USP53-203ENST00000507597 CDHR5Q9HBB8 845 aa22.1■■□□□ 1.13
USP53-203ENST00000507597 PADI3Q9ULW8 664 aa22.1■■□□□ 1.13
USP53-203ENST00000507597 NOC2LQ9Y3T9 749 aaKnown RBP22.1■■□□□ 1.13
USP53-203ENST00000507597 DENND3A2RUS2 1198 aa22.09■■□□□ 1.13
USP53-203ENST00000507597 GCNT3O95395 438 aa22.09■■□□□ 1.13
USP53-203ENST00000507597 PRKCBP05771 671 aa22.09■■□□□ 1.13
USP53-203ENST00000507597 PNOCQ13519 176 aa22.09■■□□□ 1.13
USP53-203ENST00000507597 IKBKEQ14164 716 aa22.09■■□□□ 1.13
USP53-203ENST00000507597 PLEKHG4Q58EX7 1191 aa22.09■■□□□ 1.13
USP53-203ENST00000507597 PPP4R3CPQ6ZMV5 832 aa22.09■■□□□ 1.13
USP53-203ENST00000507597 ZNF720Q7Z2F6 126 aa22.09■■□□□ 1.13
USP53-203ENST00000507597 DEFB128Q7Z7B8 93 aa22.09■■□□□ 1.13
USP53-203ENST00000507597 TMEM161BQ8NDZ6 487 aa22.09■■□□□ 1.13
USP53-203ENST00000507597 CLSTN2Q9H4D0 955 aa22.09■■□□□ 1.13
USP53-203ENST00000507597 TMEM206Q9H813 350 aa22.09■■□□□ 1.13
USP53-203ENST00000507597 ST3GAL5Q9UNP4 418 aa22.09■■□□□ 1.13
USP53-203ENST00000507597 ACKR2O00590 384 aa22.08■■□□□ 1.13
USP53-203ENST00000507597 NBNO60934 754 aa22.08■■□□□ 1.13
USP53-203ENST00000507597 RHOBTB3O94955 611 aa22.08■■□□□ 1.13
USP53-203ENST00000507597 FGBP02675 491 aa22.08■■□□□ 1.13
USP53-203ENST00000507597 SKIP12755 728 aa22.08■■□□□ 1.13
USP53-203ENST00000507597 CD52P31358 61 aa22.08■■□□□ 1.13
USP53-203ENST00000507597 PPP1R2P41236 205 aa22.08■■□□□ 1.13
USP53-203ENST00000507597 MBTD1Q05BQ5 628 aa22.08■■□□□ 1.13
USP53-203ENST00000507597 KMT5BQ4FZB7 885 aa22.08■■□□□ 1.13
USP53-203ENST00000507597 FAM228AQ86W67 206 aa22.08■■□□□ 1.13
USP53-203ENST00000507597 CCDC51Q96ER9 411 aa22.08■■□□□ 1.13
USP53-203ENST00000507597 MRPL4Q9BYD3 311 aaKnown RBP22.08■■□□□ 1.13
USP53-203ENST00000507597 FZD8Q9H461 694 aa22.08■■□□□ 1.13
USP53-203ENST00000507597 ABHD14A-ACY1A0A1B0GW23 586 aa22.07■■□□□ 1.12
USP53-203ENST00000507597 EIF3DO15371 548 aaKnown RBP eCLIP22.07■■□□□ 1.12
USP53-203ENST00000507597 BAIAP3O94812 1187 aa22.07■■□□□ 1.12
USP53-203ENST00000507597 ITGB8P26012 769 aa22.07■■□□□ 1.12
USP53-203ENST00000507597 GTF2BQ00403 316 aa22.07■■□□□ 1.12
USP53-203ENST00000507597 PRPF4BQ13523 1007 aaKnown RBP22.07■■□□□ 1.12
USP53-203ENST00000507597 NOTUMQ6P988 496 aa22.07■■□□□ 1.12
USP53-203ENST00000507597 DBF4BQ8NFT6 615 aa22.07■■□□□ 1.12
USP53-203ENST00000507597 GPT2Q8TD30 523 aa22.07■■□□□ 1.12
USP53-203ENST00000507597 BICD1Q96G01 975 aa22.07■■□□□ 1.12
USP53-203ENST00000507597 ACCSQ96QU6 501 aa22.07■■□□□ 1.12
USP53-203ENST00000507597 ADPGKQ9BRR6 497 aa22.07■■□□□ 1.12
USP53-203ENST00000507597 ERVK-5Q9HDB9 667 aa22.07■■□□□ 1.12
USP53-203ENST00000507597 PCDHA5Q9Y5H7 936 aa22.07■■□□□ 1.12
USP53-203ENST00000507597 UBE4BO95155 1302 aa22.06■■□□□ 1.12
USP53-203ENST00000507597 ALPK3Q96L96 1907 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms