RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 LAG3P18627 525 aa10.12□□□□□ -0.79
PDLIM5-209ENST00000506632 U2AF2P26368 475 aaKnown RBP eCLIP10.12□□□□□ -0.793e-7■■□□□ 11.5
PDLIM5-209ENST00000506632 GTF2F1P35269 517 aaKnown RBP eCLIP10.12□□□□□ -0.79
PDLIM5-209ENST00000506632 PHKA2P46019 1235 aa10.12□□□□□ -0.79
PDLIM5-209ENST00000506632 TRAPPC10P48553 1259 aa10.12□□□□□ -0.79
PDLIM5-209ENST00000506632 RARRES1P49788 294 aa10.12□□□□□ -0.79
PDLIM5-209ENST00000506632 POU5F1BQ06416 359 aa10.12□□□□□ -0.79
PDLIM5-209ENST00000506632 CATSPER4Q7RTX7 472 aa10.12□□□□□ -0.79
PDLIM5-209ENST00000506632 LRRC43Q8N309 656 aa10.12□□□□□ -0.79
PDLIM5-209ENST00000506632 TCP11Q8WWU5 503 aa10.12□□□□□ -0.79
PDLIM5-209ENST00000506632 RSPH1Q8WYR4 309 aa10.12□□□□□ -0.79
PDLIM5-209ENST00000506632 MTRQ99707 1265 aa10.12□□□□□ -0.79
PDLIM5-209ENST00000506632 BMP2KQ9NSY1 1161 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-209ENST00000506632 AGPAT5Q9NUQ2 364 aa10.12□□□□□ -0.79
PDLIM5-209ENST00000506632 PIN4Q9Y237 131 aaKnown RBP10.12□□□□□ -0.79
PDLIM5-209ENST00000506632 LZTS1Q9Y250 596 aa10.12□□□□□ -0.79
PDLIM5-209ENST00000506632 H3BQ06 376 aaPredicted RBP10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 FSCN2O14926 492 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 TBX10O75333 385 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 MED24O75448 989 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 OR52Z1P0C646 297 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 SKIP12755 728 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 ATP2B1P20020 1258 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 HOXA11P31270 313 aaPredicted RBP10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 ARL2P36404 184 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 RAB27AP51159 221 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 PTENP60484 403 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 PLCB3Q01970 1234 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 DLX2Q07687 328 aaPredicted RBP10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 ADAM15Q13444 863 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 MXD4Q14582 209 aaPredicted RBP10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 ZNF174Q15697 407 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 PUS10Q3MIT2 529 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 TTC38Q5R3I4 469 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 TWF2Q6IBS0 349 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 PTCRAQ6ISU1 281 aaPredicted RBP10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 KCNT2Q6UVM3 1135 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 MRPL10Q7Z7H8 261 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 ADGRD2Q7Z7M1 963 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 CATSPER3Q86XQ3 398 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 FAM178BQ8IXR5 827 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 C4orf32Q8N8J7 132 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 FAM184AQ8NB25 1140 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 RNF149Q8NC42 400 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 HELQQ8TDG4 1101 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 ASAP3Q8TDY4 903 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 PIGOQ8TEQ8 1089 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 TMX3Q96JJ7 454 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 POLR3CQ9BUI4 534 aaPredicted RBP10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 TUFT1Q9NNX1 390 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 FAM105AQ9NUU6 356 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 WDR70Q9NW82 654 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 CLDND1Q9NY35 253 aa10.11□□□□□ -0.79
PDLIM5-209ENST00000506632 MEIS3P2A8K0S8 358 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 LINC01565O15544 149 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 ST18O60284 1047 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 GLP2RO95838 553 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 SRGAP2CP0DJJ0 459 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 IL9P15248 144 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 MUTP22033 750 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 RPA1P27694 616 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 PPM1AP35813 382 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 TECP42680 631 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 TOB1P50616 345 aaPredicted RBP10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 FXR2P51116 673 aaKnown RBP eCLIP10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 ERVFC1P60507 584 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 CAPSQ13938 189 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 PCBP1Q15365 356 aaKnown RBP eCLIP10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 UBXN11Q5T124 520 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 SPOUT1Q5T280 376 aaKnown RBP10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 PDE12Q6L8Q7 609 aaKnown RBP10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 THNSL1Q8IYQ7 743 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 ABI1Q8IZP0 508 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 SLC39A11Q8N1S5 342 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 EFHBQ8N7U6 833 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 RNF169Q8NCN4 708 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 MRPS27Q92552 414 aaKnown RBP10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 LPPQ93052 612 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 PPP2R3CQ969Q6 453 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 MSLNLQ96KJ4 702 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 ZNF558Q96NG5 402 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 TBC1D32Q96NH3 1257 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 MRPL9Q9BYD2 267 aaKnown RBP10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 NFKBIZQ9BYH8 718 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 CD320Q9NPF0 282 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 TLR9Q9NR96 1032 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 DBR1Q9UK59 544 aaKnown RBP10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 PCDHGC5Q9Y5F6 944 aa10.1□□□□□ -0.79
PDLIM5-209ENST00000506632 A0A087WWV3 80 aa10.09□□□□□ -0.79
PDLIM5-209ENST00000506632 TSPAN1O60635 241 aa10.09□□□□□ -0.79
PDLIM5-209ENST00000506632 OFD1O75665 1012 aa10.09□□□□□ -0.79
PDLIM5-209ENST00000506632 CSPG5O95196 566 aa10.09□□□□□ -0.79
PDLIM5-209ENST00000506632 GLRA2P23416 452 aa10.09□□□□□ -0.79
PDLIM5-209ENST00000506632 AXLP30530 894 aa10.09□□□□□ -0.79
PDLIM5-209ENST00000506632 PBX3P40426 434 aa10.09□□□□□ -0.79
PDLIM5-209ENST00000506632 NRIP1P48552 1158 aa10.09□□□□□ -0.79
PDLIM5-209ENST00000506632 MBTD1Q05BQ5 628 aa10.09□□□□□ -0.79
PDLIM5-209ENST00000506632 KCNC3Q14003 757 aa10.09□□□□□ -0.79
PDLIM5-209ENST00000506632 SMAD2Q15796 467 aaKnown RBP10.09□□□□□ -0.79
PDLIM5-209ENST00000506632 AMHR2Q16671 573 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms