RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 CAPSQ13938 189 aa17.3■□□□□ 0.36
CLDND1-211ENST00000506575 PCBP1Q15365 356 aaKnown RBP eCLIP17.3■□□□□ 0.36
CLDND1-211ENST00000506575 CSPP1Q1MSJ5 1256 aa17.3■□□□□ 0.36
CLDND1-211ENST00000506575 KRT79Q5XKE5 535 aa17.3■□□□□ 0.36
CLDND1-211ENST00000506575 MAEAQ7L5Y9 396 aa17.3■□□□□ 0.36
CLDND1-211ENST00000506575 ZNF598Q86UK7 904 aaKnown RBP17.3■□□□□ 0.36
CLDND1-211ENST00000506575 IGSF22Q8N9C0 903 aa17.3■□□□□ 0.36
CLDND1-211ENST00000506575 HELQQ8TDG4 1101 aa17.3■□□□□ 0.36
CLDND1-211ENST00000506575 ASAP3Q8TDY4 903 aa17.3■□□□□ 0.36
CLDND1-211ENST00000506575 CASD1Q96PB1 797 aa17.3■□□□□ 0.36
CLDND1-211ENST00000506575 FAM105AQ9NUU6 356 aa17.3■□□□□ 0.36
CLDND1-211ENST00000506575 XIRP2A4UGR9 3374 aa17.29■□□□□ 0.36
CLDND1-211ENST00000506575 INO80B-WBP1J3KQ70 363 aa17.29■□□□□ 0.36
CLDND1-211ENST00000506575 ARL2P36404 184 aa17.29■□□□□ 0.36
CLDND1-211ENST00000506575 PTENP60484 403 aa17.29■□□□□ 0.36
CLDND1-211ENST00000506575 POU5F1BQ06416 359 aa17.29■□□□□ 0.36
CLDND1-211ENST00000506575 TCEAL5Q5H9L2 206 aa17.29■□□□□ 0.36
CLDND1-211ENST00000506575 CLLU1OSQ5K130 101 aa17.29■□□□□ 0.36
CLDND1-211ENST00000506575 THNSL1Q8IYQ7 743 aa17.29■□□□□ 0.36
CLDND1-211ENST00000506575 COLGALT1Q8NBJ5 622 aa17.29■□□□□ 0.36
CLDND1-211ENST00000506575 RSPH1Q8WYR4 309 aa17.29■□□□□ 0.36
CLDND1-211ENST00000506575 PGBD4Q96DM1 585 aa17.29■□□□□ 0.36
CLDND1-211ENST00000506575 MRPL9Q9BYD2 267 aaKnown RBP17.29■□□□□ 0.36
CLDND1-211ENST00000506575 RNF19AQ9NV58 838 aa17.29■□□□□ 0.36
CLDND1-211ENST00000506575 KIAA1024Q9UPX6 916 aa17.29■□□□□ 0.36
CLDND1-211ENST00000506575 ATG2AQ2TAZ0 1938 aa17.29■□□□□ 0.36
CLDND1-211ENST00000506575 VPS37CA5D8V6 355 aaPredicted RBP17.28■□□□□ 0.36
CLDND1-211ENST00000506575 ATF7P17544 494 aaPredicted RBP17.28■□□□□ 0.36
CLDND1-211ENST00000506575 GLRA2P23416 452 aa17.28■□□□□ 0.36
CLDND1-211ENST00000506575 AXLP30530 894 aa17.28■□□□□ 0.36
CLDND1-211ENST00000506575 ATP2C1P98194 919 aaPredicted RBP17.28■□□□□ 0.36
CLDND1-211ENST00000506575 LONRF3Q496Y0 759 aa17.28■□□□□ 0.36
CLDND1-211ENST00000506575 PADI6Q6TGC4 694 aa17.28■□□□□ 0.36
CLDND1-211ENST00000506575 GLB1LQ6UWU2 654 aa17.28■□□□□ 0.36
CLDND1-211ENST00000506575 EP400NLQ6ZTU2 488 aa17.28■□□□□ 0.36
CLDND1-211ENST00000506575 SPPL3Q8TCT6 385 aa17.28■□□□□ 0.36
CLDND1-211ENST00000506575 POF1BQ8WVV4 589 aa17.28■□□□□ 0.36
CLDND1-211ENST00000506575 PPP2R3CQ969Q6 453 aa17.28■□□□□ 0.36
CLDND1-211ENST00000506575 CWH43Q9H720 699 aa17.28■□□□□ 0.36
CLDND1-211ENST00000506575 UBE2ZQ9H832 354 aaPredicted RBP17.28■□□□□ 0.36
CLDND1-211ENST00000506575 GPRC5CQ9NQ84 441 aa17.28■□□□□ 0.36
CLDND1-211ENST00000506575 DDX19AQ9NUU7 478 aaKnown RBP17.28■□□□□ 0.36
CLDND1-211ENST00000506575 HCSTQ9UBK5 93 aa17.28■□□□□ 0.36
CLDND1-211ENST00000506575 PLXNA4Q9HCM2 1894 aa17.28■□□□□ 0.36
CLDND1-211ENST00000506575 NCOR1O75376 2440 aa17.28■□□□□ 0.36
CLDND1-211ENST00000506575 LRRIQ4A6NIV6 560 aa17.27■□□□□ 0.36
CLDND1-211ENST00000506575 ZNF623O75123 536 aa17.27■□□□□ 0.36
CLDND1-211ENST00000506575 FGF18O76093 207 aa17.27■□□□□ 0.36
CLDND1-211ENST00000506575 UBE3AQ05086 875 aa17.27■□□□□ 0.36
CLDND1-211ENST00000506575 ECM1Q16610 540 aa17.27■□□□□ 0.36
CLDND1-211ENST00000506575 BRAPQ7Z569 592 aa17.27■□□□□ 0.36
CLDND1-211ENST00000506575 IFNLR1Q8IU57 520 aaPredicted RBP17.27■□□□□ 0.36
CLDND1-211ENST00000506575 LPPQ93052 612 aa17.27■□□□□ 0.36
CLDND1-211ENST00000506575 ZNF558Q96NG5 402 aa17.27■□□□□ 0.36
CLDND1-211ENST00000506575 NFKBIZQ9BYH8 718 aa17.27■□□□□ 0.36
CLDND1-211ENST00000506575 BHMT2Q9H2M3 363 aa17.27■□□□□ 0.36
CLDND1-211ENST00000506575 DNM3Q9UQ16 869 aa17.27■□□□□ 0.36
CLDND1-211ENST00000506575 PCDHB2Q9Y5E7 798 aa17.27■□□□□ 0.36
CLDND1-211ENST00000506575 TCF20Q9UGU0 1960 aaKnown RBP17.26■□□□□ 0.35
CLDND1-211ENST00000506575 PP2D1A8MPX8 630 aa17.26■□□□□ 0.35
CLDND1-211ENST00000506575 NCK2O43639 380 aa17.26■□□□□ 0.35
CLDND1-211ENST00000506575 TSPAN1O60635 241 aa17.26■□□□□ 0.35
CLDND1-211ENST00000506575 CYP11B2P19099 503 aa17.26■□□□□ 0.35
CLDND1-211ENST00000506575 DNAJB1P25685 340 aa17.26■□□□□ 0.35
CLDND1-211ENST00000506575 HOXA11P31270 313 aaPredicted RBP17.26■□□□□ 0.35
CLDND1-211ENST00000506575 PPM1AP35813 382 aa17.26■□□□□ 0.35
CLDND1-211ENST00000506575 KCNQ1P51787 676 aa17.26■□□□□ 0.35
CLDND1-211ENST00000506575 MBTD1Q05BQ5 628 aa17.26■□□□□ 0.35
CLDND1-211ENST00000506575 IL17AQ16552 155 aa17.26■□□□□ 0.35
CLDND1-211ENST00000506575 ARL6IP4Q66PJ3 421 aaKnown RBP17.26■□□□□ 0.35
CLDND1-211ENST00000506575 NOTUMQ6P988 496 aa17.26■□□□□ 0.35
CLDND1-211ENST00000506575 KCNT2Q6UVM3 1135 aa17.26■□□□□ 0.35
CLDND1-211ENST00000506575 LRRC55Q6ZSA7 311 aa17.26■□□□□ 0.35
CLDND1-211ENST00000506575 ZBTB8OSQ8IWT0 167 aa17.26■□□□□ 0.35
CLDND1-211ENST00000506575 MICAL1Q8TDZ2 1067 aa17.26■□□□□ 0.35
CLDND1-211ENST00000506575 CCDC51Q96ER9 411 aa17.26■□□□□ 0.35
CLDND1-211ENST00000506575 INPP5FQ9Y2H2 1132 aa17.26■□□□□ 0.35
CLDND1-211ENST00000506575 BDP1A6H8Y1 2624 aa17.25■□□□□ 0.35
CLDND1-211ENST00000506575 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.25■□□□□ 0.35
CLDND1-211ENST00000506575 VWA3AA6NCI4 1184 aa17.25■□□□□ 0.35
CLDND1-211ENST00000506575 K7ELQ4 463 aaPredicted RBP17.25■□□□□ 0.35
CLDND1-211ENST00000506575 BMP15O95972 392 aa17.25■□□□□ 0.35
CLDND1-211ENST00000506575 KCNA5P22460 613 aa17.25■□□□□ 0.35
CLDND1-211ENST00000506575 CDC25AP30304 524 aa17.25■□□□□ 0.35
CLDND1-211ENST00000506575 RNASELQ05823 741 aaKnown RBP17.25■□□□□ 0.35
CLDND1-211ENST00000506575 CAMK1Q14012 370 aa17.25■□□□□ 0.35
CLDND1-211ENST00000506575 ZRSR1Q15695 479 aaKnown RBP17.25■□□□□ 0.35
CLDND1-211ENST00000506575 NOMO2Q5JPE7 1267 aa17.25■□□□□ 0.35
CLDND1-211ENST00000506575 CNNM3Q8NE01 707 aa17.25■□□□□ 0.35
CLDND1-211ENST00000506575 URGCPQ8TCY9 931 aa17.25■□□□□ 0.35
CLDND1-211ENST00000506575 ADAMTS19Q8TE59 1207 aa17.25■□□□□ 0.35
CLDND1-211ENST00000506575 PABPC5Q96DU9 382 aaKnown RBP17.25■□□□□ 0.35
CLDND1-211ENST00000506575 INTS4Q96HW7 963 aaKnown RBP17.25■□□□□ 0.35
CLDND1-211ENST00000506575 CPB2Q96IY4 423 aa17.25■□□□□ 0.35
CLDND1-211ENST00000506575 IFT74Q96LB3 600 aa17.25■□□□□ 0.35
CLDND1-211ENST00000506575 TRIM6Q9C030 488 aaPredicted RBP17.25■□□□□ 0.35
CLDND1-211ENST00000506575 C2orf40Q9H1Z8 148 aa17.25■□□□□ 0.35
CLDND1-211ENST00000506575 TLR9Q9NR96 1032 aa17.25■□□□□ 0.35
CLDND1-211ENST00000506575 CLDND1Q9NY35 253 aa17.25■□□□□ 0.35
CLDND1-211ENST00000506575 PUF60Q9UHX1 559 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms