RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 HMGXB3Q12766 1538 aa7.72□□□□□ -1.17
HERC4-213ENST00000506515 LAMC3Q9Y6N6 1575 aa7.71□□□□□ -1.17
HERC4-213ENST00000506515 GOLGA6CA6NDK9 693 aa7.71□□□□□ -1.18
HERC4-213ENST00000506515 GOLGA6BA6NDN3 693 aa7.71□□□□□ -1.18
HERC4-213ENST00000506515 SEC24DO94855 1032 aaPredicted RBP7.71□□□□□ -1.18
HERC4-213ENST00000506515 CYP1A1P04798 512 aaPredicted RBP7.71□□□□□ -1.18
HERC4-213ENST00000506515 GOLGA6DP0CG33 693 aa7.71□□□□□ -1.18
HERC4-213ENST00000506515 HNRNPLP14866 589 aaKnown RBP eCLIP7.71□□□□□ -1.18
HERC4-213ENST00000506515 ADKP55263 362 aaKnown RBP7.71□□□□□ -1.18
HERC4-213ENST00000506515 CD69Q07108 199 aa7.71□□□□□ -1.18
HERC4-213ENST00000506515 MALLQ13021 153 aa7.71□□□□□ -1.18
HERC4-213ENST00000506515 EIF4HQ15056 248 aaKnown RBP7.71□□□□□ -1.18
HERC4-213ENST00000506515 RRP12Q5JTH9 1297 aaKnown RBP7.71□□□□□ -1.18
HERC4-213ENST00000506515 MCTP2Q6DN12 878 aa7.71□□□□□ -1.18
HERC4-213ENST00000506515 RTKN2Q8IZC4 609 aa7.71□□□□□ -1.18
HERC4-213ENST00000506515 GLB1L3Q8NCI6 653 aaPredicted RBP7.71□□□□□ -1.18
HERC4-213ENST00000506515 CLIP3Q96DZ5 547 aa7.71□□□□□ -1.18
HERC4-213ENST00000506515 NUP88Q99567 741 aaPredicted RBP7.71□□□□□ -1.18
HERC4-213ENST00000506515 TMEM168Q9H0V1 697 aa7.71□□□□□ -1.18
HERC4-213ENST00000506515 CD320Q9NPF0 282 aa7.71□□□□□ -1.18
HERC4-213ENST00000506515 GOLGA6AQ9NYA3 693 aa7.71□□□□□ -1.18
HERC4-213ENST00000506515 SERPINB13Q9UIV8 391 aa7.71□□□□□ -1.18
HERC4-213ENST00000506515 SARSP49591 514 aaKnown RBP7.7□□□□□ -1.18
HERC4-213ENST00000506515 SLC16A1P53985 500 aa7.7□□□□□ -1.18
HERC4-213ENST00000506515 RRADP55042 308 aa7.7□□□□□ -1.18
HERC4-213ENST00000506515 VMACQ2NL98 169 aa7.7□□□□□ -1.18
HERC4-213ENST00000506515 MUM1L1Q5H9M0 696 aa7.7□□□□□ -1.18
HERC4-213ENST00000506515 OGFOD2Q6N063 350 aa7.7□□□□□ -1.18
HERC4-213ENST00000506515 BTNL9Q6UXG8 535 aa7.7□□□□□ -1.18
HERC4-213ENST00000506515 ADI1Q9BV57 179 aa7.7□□□□□ -1.18
HERC4-213ENST00000506515 DMRT3Q9NQL9 472 aa7.7□□□□□ -1.18
HERC4-213ENST00000506515 FFAR3O14843 346 aa7.69□□□□□ -1.18
HERC4-213ENST00000506515 FSBPO95073 299 aa7.69□□□□□ -1.18
HERC4-213ENST00000506515 U2AF1L5P0DN76 240 aaPredicted RBP7.69□□□□□ -1.18
HERC4-213ENST00000506515 GSPT1P15170 499 aaKnown RBP7.69□□□□□ -1.18
HERC4-213ENST00000506515 ETV4P43268 484 aa7.69□□□□□ -1.18
HERC4-213ENST00000506515 MEOX1P50221 254 aa7.69□□□□□ -1.18
HERC4-213ENST00000506515 AFF3P51826 1226 aaKnown RBP7.69□□□□□ -1.18
HERC4-213ENST00000506515 LINC00310P59036 64 aa7.69□□□□□ -1.18
HERC4-213ENST00000506515 U2AF1Q01081 240 aaKnown RBP eCLIP7.69□□□□□ -1.181e-6■■■■□ 20.1
HERC4-213ENST00000506515 ADAM15Q13444 863 aa7.69□□□□□ -1.18
HERC4-213ENST00000506515 KCNA10Q16322 511 aa7.69□□□□□ -1.18
HERC4-213ENST00000506515 GFOD2Q3B7J2 385 aa7.69□□□□□ -1.18
HERC4-213ENST00000506515 IFIT1BQ5T764 474 aaKnown RBP7.69□□□□□ -1.18
HERC4-213ENST00000506515 EPM2AIP1Q7L775 607 aaPredicted RBP7.69□□□□□ -1.18
HERC4-213ENST00000506515 CATIPQ7Z7H3 387 aa7.69□□□□□ -1.18
HERC4-213ENST00000506515 NRG4Q8WWG1 115 aa7.69□□□□□ -1.18
HERC4-213ENST00000506515 NKD2Q969F2 451 aaPredicted RBP7.69□□□□□ -1.18
HERC4-213ENST00000506515 DACT3Q96B18 629 aaPredicted RBP7.69□□□□□ -1.18
HERC4-213ENST00000506515 COA7Q96BR5 231 aa7.69□□□□□ -1.18
HERC4-213ENST00000506515 YTHDC1Q96MU7 727 aaKnown RBP7.69□□□□□ -1.18
HERC4-213ENST00000506515 ANLNQ9NQW6 1124 aa7.69□□□□□ -1.18
HERC4-213ENST00000506515 FAM184BQ9ULE4 1060 aa7.69□□□□□ -1.18
HERC4-213ENST00000506515 ZDHHC9Q9Y397 364 aa7.69□□□□□ -1.18
HERC4-213ENST00000506515 SH3D21A4FU49 640 aa7.68□□□□□ -1.18
HERC4-213ENST00000506515 NPIPB6E9PJ23 425 aa7.68□□□□□ -1.18
HERC4-213ENST00000506515 LY86O95711 162 aa7.68□□□□□ -1.18
HERC4-213ENST00000506515 TSPAN15O95858 294 aa7.68□□□□□ -1.18
HERC4-213ENST00000506515 GTF2H3Q13889 308 aa7.68□□□□□ -1.18
HERC4-213ENST00000506515 MAN2A1Q16706 1144 aa7.68□□□□□ -1.18
HERC4-213ENST00000506515 MINDY4Q4G0A6 757 aa7.68□□□□□ -1.18
HERC4-213ENST00000506515 KLHDC10Q6PID8 442 aa7.68□□□□□ -1.18
HERC4-213ENST00000506515 Q6ZUG5 572 aa7.68□□□□□ -1.18
HERC4-213ENST00000506515 LARP4Q71RC2 724 aaKnown RBP eCLIP7.68□□□□□ -1.18
HERC4-213ENST00000506515 GPR155Q7Z3F1 870 aa7.68□□□□□ -1.18
HERC4-213ENST00000506515 CARFQ8N187 725 aa7.68□□□□□ -1.18
HERC4-213ENST00000506515 TXNDC5Q8NBS9 432 aaKnown RBP7.68□□□□□ -1.18
HERC4-213ENST00000506515 PPP1R14CQ8TAE6 165 aa7.68□□□□□ -1.18
HERC4-213ENST00000506515 DPF2Q92785 391 aa7.68□□□□□ -1.18
HERC4-213ENST00000506515 OSBPL6Q9BZF3 934 aa7.68□□□□□ -1.18
HERC4-213ENST00000506515 GREM2Q9H772 168 aa7.68□□□□□ -1.18
HERC4-213ENST00000506515 GEMIN8Q9NWZ8 242 aaKnown RBP7.68□□□□□ -1.18
HERC4-213ENST00000506515 GABBR1Q9UBS5 961 aa7.68□□□□□ -1.18
HERC4-213ENST00000506515 SAP30BPQ9UHR5 308 aaKnown RBP7.68□□□□□ -1.18
HERC4-213ENST00000506515 INTUQ9ULD6 942 aa7.68□□□□□ -1.18
HERC4-213ENST00000506515 VSTM5A8MXK1 200 aa7.67□□□□□ -1.18
HERC4-213ENST00000506515 KIF3BO15066 747 aa7.67□□□□□ -1.18
HERC4-213ENST00000506515 DAPK3O43293 454 aa7.67□□□□□ -1.18
HERC4-213ENST00000506515 PRC1O43663 620 aa7.67□□□□□ -1.18
HERC4-213ENST00000506515 AP1G1O43747 822 aa7.67□□□□□ -1.18
HERC4-213ENST00000506515 LPOP22079 712 aaPredicted RBP7.67□□□□□ -1.18
HERC4-213ENST00000506515 AKAP5P24588 427 aa7.67□□□□□ -1.18
HERC4-213ENST00000506515 MCAMP43121 646 aa7.67□□□□□ -1.18
HERC4-213ENST00000506515 RAP1GAPP47736 663 aa7.67□□□□□ -1.18
HERC4-213ENST00000506515 TBX4P57082 545 aa7.67□□□□□ -1.18
HERC4-213ENST00000506515 CAP1Q01518 475 aa7.67□□□□□ -1.18
HERC4-213ENST00000506515 PCOLCEQ15113 449 aa7.67□□□□□ -1.18
HERC4-213ENST00000506515 NOMO1Q15155 1222 aa7.67□□□□□ -1.18
HERC4-213ENST00000506515 TRIM68Q6AZZ1 485 aa7.67□□□□□ -1.18
HERC4-213ENST00000506515 RIN2Q8WYP3 895 aaPredicted RBP7.67□□□□□ -1.18
HERC4-213ENST00000506515 AIFM3Q96NN9 605 aa7.67□□□□□ -1.18
HERC4-213ENST00000506515 UIMC1Q96RL1 719 aa7.67□□□□□ -1.18
HERC4-213ENST00000506515 CARD11Q9BXL7 1154 aa7.67□□□□□ -1.18
HERC4-213ENST00000506515 GTPBP4Q9BZE4 634 aaKnown RBP7.67□□□□□ -1.18
HERC4-213ENST00000506515 KATNBL1Q9H079 304 aa7.67□□□□□ -1.18
HERC4-213ENST00000506515 KIAA1683Q9H0B3 1180 aa7.67□□□□□ -1.18
HERC4-213ENST00000506515 BARX1Q9HBU1 254 aaPredicted RBP7.67□□□□□ -1.18
HERC4-213ENST00000506515 SCOCQ9UIL1 159 aa7.67□□□□□ -1.18
HERC4-213ENST00000506515 LIMCH1Q9UPQ0 1083 aa7.67□□□□□ -1.18
HERC4-213ENST00000506515 PTPN22Q9Y2R2 807 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms