RNA–Protein interactions for RNA: ENST00000506496.1

FBXO4-205, Transcript of F-box protein 4, humanhuman

TSL 3

Gene FBXO4, Length 637 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO4-205ENST00000506496 RAB27AP51159 221 aa18.9■□□□□ 0.62
FBXO4-205ENST00000506496 NEK4P51957 841 aa18.9■□□□□ 0.62
FBXO4-205ENST00000506496 RBM10P98175 930 aaKnown RBP18.9■□□□□ 0.62
FBXO4-205ENST00000506496 CTTNQ14247 550 aaKnown RBP18.9■□□□□ 0.62
FBXO4-205ENST00000506496 ME3Q16798 604 aa18.9■□□□□ 0.62
FBXO4-205ENST00000506496 XKR9Q5GH70 373 aa18.9■□□□□ 0.62
FBXO4-205ENST00000506496 ZNF598Q86UK7 904 aaKnown RBP18.9■□□□□ 0.62
FBXO4-205ENST00000506496 TPH2Q8IWU9 490 aa18.9■□□□□ 0.62
FBXO4-205ENST00000506496 HAS1Q92839 578 aa18.9■□□□□ 0.62
FBXO4-205ENST00000506496 GTF3C6Q969F1 213 aa18.9■□□□□ 0.62
FBXO4-205ENST00000506496 TMEM169Q96HH4 297 aa18.9■□□□□ 0.62
FBXO4-205ENST00000506496 GBP3Q9H0R5 595 aa18.9■□□□□ 0.62
FBXO4-205ENST00000506496 RGL1Q9NZL6 768 aa18.9■□□□□ 0.62
FBXO4-205ENST00000506496 MUTYHQ9UIF7 546 aa18.9■□□□□ 0.62
FBXO4-205ENST00000506496 ATF7P17544 494 aaPredicted RBP18.89■□□□□ 0.61
FBXO4-205ENST00000506496 BCAR1P56945 870 aa18.89■□□□□ 0.61
FBXO4-205ENST00000506496 SMC1AQ14683 1233 aaKnown RBP18.89■□□□□ 0.61
FBXO4-205ENST00000506496 CALCRLQ16602 461 aa18.89■□□□□ 0.61
FBXO4-205ENST00000506496 EARS2Q5JPH6 523 aaKnown RBP18.89■□□□□ 0.61
FBXO4-205ENST00000506496 RNF135Q8IUD6 432 aa18.89■□□□□ 0.61
FBXO4-205ENST00000506496 C4orf19Q8IY42 314 aa18.89■□□□□ 0.61
FBXO4-205ENST00000506496 ZNF579Q8NAF0 562 aaKnown RBP18.89■□□□□ 0.61
FBXO4-205ENST00000506496 TCP11Q8WWU5 503 aa18.89■□□□□ 0.61
FBXO4-205ENST00000506496 PGBD4Q96DM1 585 aa18.89■□□□□ 0.61
FBXO4-205ENST00000506496 RPGRIP1Q96KN7 1286 aa18.89■□□□□ 0.61
FBXO4-205ENST00000506496 APOL5Q9BWW9 433 aa18.89■□□□□ 0.61
FBXO4-205ENST00000506496 ZSWIM4Q9H7M6 989 aa18.89■□□□□ 0.61
FBXO4-205ENST00000506496 FAM105AQ9NUU6 356 aa18.89■□□□□ 0.61
FBXO4-205ENST00000506496 PPME1Q9Y570 386 aa18.89■□□□□ 0.61
FBXO4-205ENST00000506496 HIDE1A8MVS5 230 aa18.88■□□□□ 0.61
FBXO4-205ENST00000506496 LARGE1O95461 756 aa18.88■□□□□ 0.61
FBXO4-205ENST00000506496 EMC2Q15006 297 aa18.88■□□□□ 0.61
FBXO4-205ENST00000506496 SLC39A11Q8N1S5 342 aa18.88■□□□□ 0.61
FBXO4-205ENST00000506496 VN1R2Q8NFZ6 395 aa18.88■□□□□ 0.61
FBXO4-205ENST00000506496 URGCPQ8TCY9 931 aa18.88■□□□□ 0.61
FBXO4-205ENST00000506496 PRPF31Q8WWY3 499 aaKnown RBP18.88■□□□□ 0.61
FBXO4-205ENST00000506496 MTRQ99707 1265 aa18.88■□□□□ 0.61
FBXO4-205ENST00000506496 WRAP73Q9P2S5 460 aaPredicted RBP18.88■□□□□ 0.61
FBXO4-205ENST00000506496 GAS2O43903 313 aaKnown RBP18.87■□□□□ 0.61
FBXO4-205ENST00000506496 ERLIN2O94905 339 aa18.87■□□□□ 0.61
FBXO4-205ENST00000506496 FDPSP14324 419 aaKnown RBP18.87■□□□□ 0.61
FBXO4-205ENST00000506496 MUC3AQ02505 3323 aa18.87■□□□□ 0.61
FBXO4-205ENST00000506496 LAMTOR4Q0VGL1 99 aa18.87■□□□□ 0.61
FBXO4-205ENST00000506496 NOMO2Q5JPE7 1267 aa18.87■□□□□ 0.61
FBXO4-205ENST00000506496 ERICH6BQ5W0A0 696 aa18.87■□□□□ 0.61
FBXO4-205ENST00000506496 SRGAP1Q7Z6B7 1085 aa18.87■□□□□ 0.61
FBXO4-205ENST00000506496 DIS3L2Q8IYB7 885 aaKnown RBP18.87■□□□□ 0.61
FBXO4-205ENST00000506496 RNF149Q8NC42 400 aa18.87■□□□□ 0.61
FBXO4-205ENST00000506496 NSUN7Q8NE18 718 aaKnown RBP18.87■□□□□ 0.61
FBXO4-205ENST00000506496 RSPH1Q8WYR4 309 aa18.87■□□□□ 0.61
FBXO4-205ENST00000506496 PHF7Q9BWX1 381 aaPredicted RBP18.87■□□□□ 0.61
FBXO4-205ENST00000506496 DHX33Q9H6R0 707 aaKnown RBP18.87■□□□□ 0.61
FBXO4-205ENST00000506496 IFT122Q9HBG6 1241 aa18.87■□□□□ 0.61
FBXO4-205ENST00000506496 PCDHA12Q9UN75 941 aa18.87■□□□□ 0.61
FBXO4-205ENST00000506496 CARNS1A5YM72 827 aa18.86■□□□□ 0.61
FBXO4-205ENST00000506496 BTBD18B2RXH4 712 aa18.86■□□□□ 0.61
FBXO4-205ENST00000506496 NEMFO60524 1076 aa18.86■□□□□ 0.61
FBXO4-205ENST00000506496 JAK2O60674 1132 aa18.86■□□□□ 0.61
FBXO4-205ENST00000506496 CXCL14O95715 111 aa18.86■□□□□ 0.61
FBXO4-205ENST00000506496 CENPBP07199 599 aaPredicted RBP18.86■□□□□ 0.61
FBXO4-205ENST00000506496 ATP2B1P20020 1258 aa18.86■□□□□ 0.61
FBXO4-205ENST00000506496 TXKP42681 527 aa18.86■□□□□ 0.61
FBXO4-205ENST00000506496 ANKRD54Q6NXT1 300 aa18.86■□□□□ 0.61
FBXO4-205ENST00000506496 VPS52Q8N1B4 723 aa18.86■□□□□ 0.61
FBXO4-205ENST00000506496 CASP10Q92851 521 aa18.86■□□□□ 0.61
FBXO4-205ENST00000506496 FAM193BQ96PV7 902 aaPredicted RBP18.86■□□□□ 0.61
FBXO4-205ENST00000506496 EIF2AK1Q9BQI3 630 aaKnown RBP18.86■□□□□ 0.61
FBXO4-205ENST00000506496 TRAIPQ9BWF2 469 aa18.86■□□□□ 0.61
FBXO4-205ENST00000506496 AGPAT5Q9NUQ2 364 aa18.86■□□□□ 0.61
FBXO4-205ENST00000506496 TBC1D13Q9NVG8 400 aa18.86■□□□□ 0.61
FBXO4-205ENST00000506496 PCDHB2Q9Y5E7 798 aa18.86■□□□□ 0.61
FBXO4-205ENST00000506496 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.85■□□□□ 0.61
FBXO4-205ENST00000506496 ZBTB39O15060 712 aa18.85■□□□□ 0.61
FBXO4-205ENST00000506496 ASAP2O43150 1006 aa18.85■□□□□ 0.61
FBXO4-205ENST00000506496 NCBP1Q09161 790 aaKnown RBP18.85■□□□□ 0.61
FBXO4-205ENST00000506496 TFDP1Q14186 410 aa18.85■□□□□ 0.61
FBXO4-205ENST00000506496 SAFBQ15424 915 aaKnown RBP eCLIP18.85■□□□□ 0.61
FBXO4-205ENST00000506496 TPRNQ4KMQ1 711 aa18.85■□□□□ 0.61
FBXO4-205ENST00000506496 FERMT3Q86UX7 667 aa18.85■□□□□ 0.61
FBXO4-205ENST00000506496 TTC12Q9H892 705 aaPredicted RBP18.85■□□□□ 0.61
FBXO4-205ENST00000506496 C2orf71A6NGG8 1288 aa18.84■□□□□ 0.61
FBXO4-205ENST00000506496 SPDYE4A6NLX3 237 aa18.84■□□□□ 0.61
FBXO4-205ENST00000506496 MEIS3P2A8K0S8 358 aa18.84■□□□□ 0.61
FBXO4-205ENST00000506496 SP100P23497 879 aaPredicted RBP18.84■□□□□ 0.61
FBXO4-205ENST00000506496 SPIRE1Q08AE8 756 aa18.84■□□□□ 0.61
FBXO4-205ENST00000506496 CBX2Q14781 532 aaPredicted RBP18.84■□□□□ 0.61
FBXO4-205ENST00000506496 HERC4Q5GLZ8 1057 aaPredicted RBP18.84■□□□□ 0.61
FBXO4-205ENST00000506496 ZBTB33Q86T24 672 aa18.84■□□□□ 0.61
FBXO4-205ENST00000506496 MRPL43Q8N983 215 aaKnown RBP18.84■□□□□ 0.61
FBXO4-205ENST00000506496 TNFRSF25Q93038 417 aa18.84■□□□□ 0.61
FBXO4-205ENST00000506496 NRDE2Q9H7Z3 1164 aa18.84■□□□□ 0.61
FBXO4-205ENST00000506496 MINDY3Q9H8M7 445 aa18.84■□□□□ 0.61
FBXO4-205ENST00000506496 RSAD1Q9HA92 442 aa18.84■□□□□ 0.61
FBXO4-205ENST00000506496 ARIH1Q9Y4X5 557 aaPredicted RBP18.84■□□□□ 0.61
FBXO4-205ENST00000506496 LOC730098B7Z3J9 87 aa18.83■□□□□ 0.6
FBXO4-205ENST00000506496 INO80B-WBP1J3KQ70 363 aa18.83■□□□□ 0.6
FBXO4-205ENST00000506496 ZNF623O75123 536 aa18.83■□□□□ 0.6
FBXO4-205ENST00000506496 OFD1O75665 1012 aa18.83■□□□□ 0.6
FBXO4-205ENST00000506496 SLITRK3O94933 977 aa18.83■□□□□ 0.6
FBXO4-205ENST00000506496 HOXB8P17481 243 aaPredicted RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms