RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 LLGL1Q15334 1064 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 ZRSR2Q15696 482 aaKnown RBP4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 ADRM1Q16186 407 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 MUM1L1Q5H9M0 696 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 ADGRF1Q5T601 910 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 C10orf62Q5T681 223 aaPredicted RBP4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 VASNQ6EMK4 673 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 CCDC149Q6ZUS6 474 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 OVCH2Q7RTZ1 564 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 MORC1Q86VD1 984 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 ZC3H18Q86VM9 953 aaKnown RBP4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 SPICE1Q8N0Z3 855 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 PPP1R35Q8TAP8 253 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 NRG4Q8WWG1 115 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 ALG3Q92685 438 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 INTS4Q96HW7 963 aaKnown RBP4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 PAWRQ96IZ0 340 aaKnown RBP4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 HIST1H2AHQ96KK5 128 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 HIST1H2AJQ99878 128 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 NOL10Q9BSC4 688 aaKnown RBP4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 ADI1Q9BV57 179 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 BTBD2Q9BX70 525 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 AMNQ9BXJ7 453 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 PITHD1Q9GZP4 211 aaPredicted RBP4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 TMEM60Q9H2L4 133 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 MTG2Q9H4K7 406 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 GREM2Q9H772 168 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 TAGLN3Q9UI15 199 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 SYNPO2Q9UMS6 1093 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 PCDHB6Q9Y5E3 794 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 FGD5Q6ZNL6 1462 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 CHD1O14646 1710 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 PRDM2Q13029 1718 aa4.04□□□□□ -1.76
TRAPPC11-205ENST00000506426 A0A0A6YYJ9 748 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 OR14I1A6ND48 311 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 CCDC154A6NI56 674 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 A6NNZ2 444 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 FAM227AF5H4B4 570 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 HTRA2O43464 458 aaPredicted RBP4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 CUTAO60888 179 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 OPHN1O60890 802 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 UBXN7O94888 489 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 RPLP2P05387 115 aaKnown RBP4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 GSPT1P15170 499 aaKnown RBP4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 PDE6BP35913 854 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 NRG3P56975 720 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 GJA9P57773 515 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 FAM193AP78312 1265 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 KIAA0753Q2KHM9 967 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 ZNF792Q3KQV3 632 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 PLEKHN1Q494U1 663 aaPredicted RBP4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 OLFML2BQ68BL8 750 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 DARS2Q6PI48 645 aaKnown RBP4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 KLHDC10Q6PID8 442 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 LRSAM1Q6UWE0 723 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 FAM180AQ6UWF9 173 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 BTNL9Q6UXG8 535 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 CD300LDQ6UXZ3 194 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 DPP8Q6V1X1 898 aaPredicted RBP4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 PROSER1Q86XN7 944 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 FAM156AQ8NDB6 213 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 ZNF526Q8TF50 670 aaPredicted RBP4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 HDAC10Q969S8 669 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 MYD88Q99836 296 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 SLC6A17Q9H1V8 727 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 BCAS3Q9H6U6 928 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 KLHL11Q9NVR0 708 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 KCMF1Q9P0J7 381 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 KLHL14Q9P2G3 628 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 PUF60Q9UHX1 559 aaKnown RBP4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 PHTF1Q9UMS5 762 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 LIMCH1Q9UPQ0 1083 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 DAAM1Q9Y4D1 1078 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 IPPQ9Y573 584 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 HCFC2Q9Y5Z7 792 aa4.03□□□□□ -1.76
TRAPPC11-205ENST00000506426 CUX1P39880 1505 aa4.02□□□□□ -1.77
TRAPPC11-205ENST00000506426 B3GALT2O43825 422 aa4.02□□□□□ -1.77
TRAPPC11-205ENST00000506426 CELA3BP08861 270 aa4.02□□□□□ -1.77
TRAPPC11-205ENST00000506426 ITGB5P18084 799 aa4.02□□□□□ -1.77
TRAPPC11-205ENST00000506426 EDNRBP24530 442 aa4.02□□□□□ -1.77
TRAPPC11-205ENST00000506426 IL12RB1P42701 662 aa4.02□□□□□ -1.77
TRAPPC11-205ENST00000506426 MCAMP43121 646 aa4.02□□□□□ -1.77
TRAPPC11-205ENST00000506426 FXR1P51114 621 aaKnown RBP eCLIP4.02□□□□□ -1.77
TRAPPC11-205ENST00000506426 CACNB3P54284 484 aa4.02□□□□□ -1.77
TRAPPC11-205ENST00000506426 YBX1P67809 324 aaKnown RBP4.02□□□□□ -1.77
TRAPPC11-205ENST00000506426 MAP3K12Q12852 859 aa4.02□□□□□ -1.77
TRAPPC11-205ENST00000506426 DHX8Q14562 1220 aaKnown RBP4.02□□□□□ -1.77
TRAPPC11-205ENST00000506426 SKIDA1Q1XH10 827 aa4.02□□□□□ -1.77
TRAPPC11-205ENST00000506426 CR1LQ2VPA4 569 aa4.02□□□□□ -1.77
TRAPPC11-205ENST00000506426 PPP4R3AQ6IN85 833 aa4.02□□□□□ -1.77
TRAPPC11-205ENST00000506426 LIPIQ6XZB0 460 aa4.02□□□□□ -1.77
TRAPPC11-205ENST00000506426 SPOCD1Q6ZMY3 1216 aa4.02□□□□□ -1.77
TRAPPC11-205ENST00000506426 TOGARAM2Q6ZUX3 1019 aa4.02□□□□□ -1.77
TRAPPC11-205ENST00000506426 MIGA2Q7L4E1 593 aa4.02□□□□□ -1.77
TRAPPC11-205ENST00000506426 BMP8AQ7Z5Y6 402 aa4.02□□□□□ -1.77
TRAPPC11-205ENST00000506426 GLB1L2Q8IW92 636 aa4.02□□□□□ -1.77
TRAPPC11-205ENST00000506426 FAM186BQ8IYM0 893 aa4.02□□□□□ -1.77
TRAPPC11-205ENST00000506426 KIAA0319LQ8IZA0 1049 aa4.02□□□□□ -1.77
TRAPPC11-205ENST00000506426 MARCH10Q8NA82 808 aaPredicted RBP4.02□□□□□ -1.77
TRAPPC11-205ENST00000506426 ACRBPQ8NEB7 543 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms