RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 AKAP3O75969 853 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 CAVIN2O95810 425 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 EFEMP2O95967 443 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 NR3C2P08235 984 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 MYBP10242 640 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 EIF2AK2P19525 551 aaKnown RBP3.94□□□□□ -1.78
TCOF1-208ENST00000506063 IBSPP21815 317 aaPredicted RBP3.94□□□□□ -1.78
TCOF1-208ENST00000506063 FCARP24071 287 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 PXNP49023 591 aaPredicted RBP3.94□□□□□ -1.78
TCOF1-208ENST00000506063 NTHL1P78549 312 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 CYP4F3Q08477 520 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 TMEM62Q0P6H9 643 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 SBK1Q52WX2 424 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 PDXDC2PQ6P474 469 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 PKN3Q6P5Z2 889 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 ZNF598Q86UK7 904 aaKnown RBP3.94□□□□□ -1.78
TCOF1-208ENST00000506063 MARCH9Q86YJ5 346 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 NEDD1Q8NHV4 660 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 NSUN6Q8TEA1 469 aaKnown RBP3.94□□□□□ -1.78
TCOF1-208ENST00000506063 WHAMMQ8TF30 809 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 DNASE1L2Q92874 299 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 FGF13Q92913 245 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 EAF2Q96CJ1 260 aaPredicted RBP3.94□□□□□ -1.78
TCOF1-208ENST00000506063 FCRL3Q96P31 734 aaPredicted RBP3.94□□□□□ -1.78
TCOF1-208ENST00000506063 MPHOSPH6Q99547 160 aaKnown RBP3.94□□□□□ -1.78
TCOF1-208ENST00000506063 CELF4Q9BZC1 486 aaKnown RBP3.94□□□□□ -1.78
TCOF1-208ENST00000506063 ADAMTS10Q9H324 1103 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 ATP6V0A4Q9HBG4 840 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 PXMP2Q9NR77 195 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 IL17RBQ9NRM6 502 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 IL17BQ9UHF5 180 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 TUBE1Q9UJT0 475 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 NOC2LQ9Y3T9 749 aaKnown RBP3.94□□□□□ -1.78
TCOF1-208ENST00000506063 KNL1Q8NG31 2342 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 NCANO14594 1321 aa3.94□□□□□ -1.78
TCOF1-208ENST00000506063 CENPEQ02224 2701 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 MTORP42345 2549 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 TEX51A0A1B0GUA7 166 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 B4DLN1 442 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 ERVH48-1M5A8F1 160 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 CAPN9O14815 690 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 TEX28O15482 410 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 SLC28A2O43868 658 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 EXTL3O43909 919 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 DKK1O94907 266 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 GALTP07902 379 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 KRT10P13645 584 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 C6P13671 934 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 FSHRP23945 695 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 KLRC2P26717 231 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 CA8P35219 290 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 MRPL12P52815 198 aaKnown RBP3.93□□□□□ -1.78
TCOF1-208ENST00000506063 GHRHRQ02643 423 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 CREB5Q02930 508 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 NFX1Q12986 1120 aaKnown RBP3.93□□□□□ -1.78
TCOF1-208ENST00000506063 IKQ13123 557 aaPredicted RBP3.93□□□□□ -1.78
TCOF1-208ENST00000506063 SERINC3Q13530 473 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 GRIK4Q16099 956 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 UAP1L1Q3KQV9 507 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 HIST2H2BCQ6DN03 193 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 LILRA6Q6PI73 481 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 MTSS1LQ765P7 747 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 RSPH3Q86UC2 560 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 SLCO6A1Q86UG4 719 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 FAM228AQ86W67 206 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 MAP4K3Q8IVH8 894 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 NPAS3Q8IXF0 933 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 RNF168Q8IYW5 571 aaPredicted RBP3.93□□□□□ -1.78
TCOF1-208ENST00000506063 STK11IPQ8N1F8 1099 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 PNPLA1Q8N8W4 532 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 ITFG1Q8TB96 612 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 FAM3CQ92520 227 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 WBP1Q96G27 269 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 TMEM169Q96HH4 297 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 PSMG3-AS1Q96PY0 264 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 RMDN3Q96TC7 470 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 PDCD2LQ9BRP1 358 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 PHF20Q9BVI0 1012 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 PRKD2Q9BZL6 878 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 NXF1Q9UBU9 619 aaKnown RBP3.93□□□□□ -1.78
TCOF1-208ENST00000506063 ST3GAL5Q9UNP4 418 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 TDRD15B5MCY1 1934 aaKnown RBP3.93□□□□□ -1.78
TCOF1-208ENST00000506063 CCDC171Q6TFL3 1326 aa3.93□□□□□ -1.78
TCOF1-208ENST00000506063 NID2Q14112 1375 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 BAZ2BQ9UIF8 2168 aaKnown RBP3.92□□□□□ -1.78
TCOF1-208ENST00000506063 TRABD2BA6NFA1 517 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 GSG1L2A8MUP6 293 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 B4E1Z4 1266 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 MAN2B1O00754 1011 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 KHNYNO15037 678 aaKnown RBP3.92□□□□□ -1.78
TCOF1-208ENST00000506063 DCLK1O15075 740 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 TLX3O43711 291 aaPredicted RBP3.92□□□□□ -1.78
TCOF1-208ENST00000506063 NMT2O60551 498 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 ECI2O75521 394 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 CFBP00751 764 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 FTH1P19P0C7X4 201 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 SPATA31D3P0C874 917 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 TGFB3P10600 412 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 CD59P13987 128 aa3.92□□□□□ -1.78
TCOF1-208ENST00000506063 CR2P20023 1033 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms