RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 ARID2Q68CP9 1835 aa18.79■□□□□ 0.6
TRAPPC11-204ENST00000505676 A0A087X0T9 212 aa18.79■□□□□ 0.6
TRAPPC11-204ENST00000505676 IGKV6D-21A0A0A0MT36 114 aa18.79■□□□□ 0.6
TRAPPC11-204ENST00000505676 CCDC169A6NNP5 214 aa18.79■□□□□ 0.6
TRAPPC11-204ENST00000505676 FAM228BP0C875 321 aa18.79■□□□□ 0.6
TRAPPC11-204ENST00000505676 RFC5P40937 340 aa18.79■□□□□ 0.6
TRAPPC11-204ENST00000505676 C9orf131Q5VYM1 1079 aa18.79■□□□□ 0.6
TRAPPC11-204ENST00000505676 EXOC8Q8IYI6 725 aa18.79■□□□□ 0.6
TRAPPC11-204ENST00000505676 CDCA5Q96FF9 252 aa18.79■□□□□ 0.6
TRAPPC11-204ENST00000505676 ZNF302Q9NR11 478 aa18.79■□□□□ 0.6
TRAPPC11-204ENST00000505676 BTBD7Q9P203 1132 aa18.79■□□□□ 0.6
TRAPPC11-204ENST00000505676 SEPT9Q9UHD8 586 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC11-204ENST00000505676 DNAJC12Q9UKB3 198 aa18.79■□□□□ 0.6
TRAPPC11-204ENST00000505676 NENFQ9UMX5 172 aa18.79■□□□□ 0.6
TRAPPC11-204ENST00000505676 CAPN6Q9Y6Q1 641 aa18.79■□□□□ 0.6
TRAPPC11-204ENST00000505676 DUSP10Q9Y6W6 482 aa18.79■□□□□ 0.6
TRAPPC11-204ENST00000505676 POLR2AP24928 1970 aaKnown RBP18.79■□□□□ 0.6
TRAPPC11-204ENST00000505676 KIAA1217Q5T5P2 1943 aa18.79■□□□□ 0.6
TRAPPC11-204ENST00000505676 TARSL2A2RTX5 802 aaKnown RBP18.78■□□□□ 0.6
TRAPPC11-204ENST00000505676 MOCS3O95396 460 aa18.78■□□□□ 0.6
TRAPPC11-204ENST00000505676 KIAA0753Q2KHM9 967 aa18.78■□□□□ 0.6
TRAPPC11-204ENST00000505676 FAM160B1Q5W0V3 765 aa18.78■□□□□ 0.6
TRAPPC11-204ENST00000505676 CCDC60Q8IWA6 550 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC11-204ENST00000505676 FBXL18Q96ME1 805 aa18.78■□□□□ 0.6
TRAPPC11-204ENST00000505676 NIFKQ9BYG3 293 aaKnown RBP18.78■□□□□ 0.6
TRAPPC11-204ENST00000505676 LCTP09848 1927 aa18.78■□□□□ 0.6
TRAPPC11-204ENST00000505676 DENND3A2RUS2 1198 aa18.78■□□□□ 0.6
TRAPPC11-204ENST00000505676 ENC1O14682 589 aa18.78■□□□□ 0.6
TRAPPC11-204ENST00000505676 ZRANB2O95218 330 aaKnown RBP eCLIP18.78■□□□□ 0.6
TRAPPC11-204ENST00000505676 OATP04181 439 aa18.78■□□□□ 0.6
TRAPPC11-204ENST00000505676 CBWD6Q4V339 395 aa18.78■□□□□ 0.6
TRAPPC11-204ENST00000505676 CBWD3Q5JTY5 395 aa18.78■□□□□ 0.6
TRAPPC11-204ENST00000505676 CBWD5Q5RIA9 395 aa18.78■□□□□ 0.6
TRAPPC11-204ENST00000505676 ZNF571Q7Z3V5 609 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC11-204ENST00000505676 CAGE1Q8TC20 777 aa18.78■□□□□ 0.6
TRAPPC11-204ENST00000505676 LMBR1Q8WVP7 490 aa18.78■□□□□ 0.6
TRAPPC11-204ENST00000505676 FAM167AQ96KS9 214 aa18.78■□□□□ 0.6
TRAPPC11-204ENST00000505676 ELP3Q9H9T3 547 aa18.78■□□□□ 0.6
TRAPPC11-204ENST00000505676 MLXIPQ9HAP2 919 aa18.78■□□□□ 0.6
TRAPPC11-204ENST00000505676 NAGPAQ9UK23 515 aa18.78■□□□□ 0.6
TRAPPC11-204ENST00000505676 TFR2Q9UP52 801 aa18.78■□□□□ 0.6
TRAPPC11-204ENST00000505676 CES2O00748 559 aa18.77■□□□□ 0.6
TRAPPC11-204ENST00000505676 ARID5AQ03989 594 aa18.77■□□□□ 0.6
TRAPPC11-204ENST00000505676 WDR93Q6P2C0 686 aa18.77■□□□□ 0.6
TRAPPC11-204ENST00000505676 ALKBH5Q6P6C2 394 aaKnown RBP18.77■□□□□ 0.6
TRAPPC11-204ENST00000505676 AFAP1L1Q8TED9 768 aa18.77■□□□□ 0.6
TRAPPC11-204ENST00000505676 CBWD1Q9BRT8 395 aa18.77■□□□□ 0.6
TRAPPC11-204ENST00000505676 SYT17Q9BSW7 474 aa18.77■□□□□ 0.6
TRAPPC11-204ENST00000505676 ASCC2Q9H1I8 757 aaPredicted RBP18.77■□□□□ 0.6
TRAPPC11-204ENST00000505676 GPRC5CQ9NQ84 441 aa18.77■□□□□ 0.6
TRAPPC11-204ENST00000505676 NRBP2Q9NSY0 501 aa18.77■□□□□ 0.6
TRAPPC11-204ENST00000505676 FAM53CQ9NYF3 392 aa18.77■□□□□ 0.6
TRAPPC11-204ENST00000505676 ARHGAP28Q9P2N2 729 aa18.77■□□□□ 0.6
TRAPPC11-204ENST00000505676 SYNGAP1Q96PV0 1343 aa18.77■□□□□ 0.6
TRAPPC11-204ENST00000505676 ZSCAN20P17040 1043 aaPredicted RBP18.77■□□□□ 0.59
TRAPPC11-204ENST00000505676 CNGA1P29973 690 aa18.77■□□□□ 0.59
TRAPPC11-204ENST00000505676 DRAP1Q14919 205 aaPredicted RBP18.77■□□□□ 0.59
TRAPPC11-204ENST00000505676 EPC2Q52LR7 807 aa18.77■□□□□ 0.59
TRAPPC11-204ENST00000505676 NCAPG2Q86XI2 1143 aa18.77■□□□□ 0.59
TRAPPC11-204ENST00000505676 KRT222Q8N1A0 295 aa18.77■□□□□ 0.59
TRAPPC11-204ENST00000505676 MSL3Q8N5Y2 521 aaKnown RBP18.77■□□□□ 0.59
TRAPPC11-204ENST00000505676 OTUD5Q96G74 571 aa18.77■□□□□ 0.59
TRAPPC11-204ENST00000505676 EMSYQ7Z589 1322 aa18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 TRIM49P0CI25 452 aa18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 TRIM49CP0CI26 452 aa18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 EPHX2P34913 555 aa18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 PAFAH1B1P43034 410 aa18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 MXI1P50539 228 aa18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 NAP1L1P55209 391 aaKnown RBP18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 APBA1Q02410 837 aa18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 KIF22Q14807 665 aa18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 CC2D1AQ6P1N0 951 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 SHCBP1Q8NEM2 672 aa18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 LMO3Q8TAP4 145 aa18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 MROH8Q9H579 483 aa18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 ANKZF1Q9H8Y5 726 aa18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 WDR81Q562E7 1941 aa18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 IQCA1LA6NCM1 817 aa18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 GAS2O43903 313 aaKnown RBP18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 EVI5O60447 810 aa18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 H2AFZP0C0S5 128 aa18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 NAMPTP43490 491 aa18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 POLGP54098 1239 aaPredicted RBP18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 SNRNP35Q16560 246 aaKnown RBP18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 GLIPR1L2Q4G1C9 344 aa18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 SMYD5Q6GMV2 418 aa18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 H2AFVQ71UI9 128 aa18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 OSBPL9Q96SU4 736 aa18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 IKZF4Q9H2S9 585 aa18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 DHX33Q9H6R0 707 aaKnown RBP18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 HDAC6Q9UBN7 1215 aa18.76■□□□□ 0.59
TRAPPC11-204ENST00000505676 CNTN2Q02246 1040 aa18.75■□□□□ 0.59
TRAPPC11-204ENST00000505676 EMC2Q15006 297 aa18.75■□□□□ 0.59
TRAPPC11-204ENST00000505676 METTL7BQ6UX53 244 aa18.75■□□□□ 0.59
TRAPPC11-204ENST00000505676 CYFIP1Q7L576 1253 aa18.75■□□□□ 0.59
TRAPPC11-204ENST00000505676 SYCE1Q8N0S2 351 aa18.75■□□□□ 0.59
TRAPPC11-204ENST00000505676 SLC7A3Q8WY07 619 aa18.75■□□□□ 0.59
TRAPPC11-204ENST00000505676 MFSD14AQ96MC6 490 aa18.75■□□□□ 0.59
TRAPPC11-204ENST00000505676 POLR3FQ9H1D9 316 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC11-204ENST00000505676 PCIF1Q9H4Z3 704 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms