RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 ARHGAP28Q9P2N2 729 aa11.32□□□□□ -0.6
RFC1-210ENST00000505077 LRRIQ4A6NIV6 560 aa11.31□□□□□ -0.6
RFC1-210ENST00000505077 K7ENM7 598 aa11.31□□□□□ -0.6
RFC1-210ENST00000505077 VTNP04004 478 aa11.31□□□□□ -0.6
RFC1-210ENST00000505077 SFPQP23246 707 aaKnown RBP eCLIP11.31□□□□□ -0.6
RFC1-210ENST00000505077 CASP1P29466 404 aa11.31□□□□□ -0.6
RFC1-210ENST00000505077 THPOP40225 353 aa11.31□□□□□ -0.6
RFC1-210ENST00000505077 CRYBB1P53674 252 aaPredicted RBP11.31□□□□□ -0.6
RFC1-210ENST00000505077 SOX10P56693 466 aa11.31□□□□□ -0.6
RFC1-210ENST00000505077 PTENP60484 403 aa11.31□□□□□ -0.6
RFC1-210ENST00000505077 CACNB1Q02641 598 aaPredicted RBP11.31□□□□□ -0.6
RFC1-210ENST00000505077 FAAP100Q0VG06 881 aa11.31□□□□□ -0.6
RFC1-210ENST00000505077 LRRC26Q2I0M4 334 aa11.31□□□□□ -0.6
RFC1-210ENST00000505077 TRIM71Q2Q1W2 868 aaKnown RBP11.31□□□□□ -0.6
RFC1-210ENST00000505077 KMT5BQ4FZB7 885 aa11.31□□□□□ -0.6
RFC1-210ENST00000505077 ZNF658Q5TYW1 1059 aaPredicted RBP11.31□□□□□ -0.6
RFC1-210ENST00000505077 RNF149Q8NC42 400 aa11.31□□□□□ -0.6
RFC1-210ENST00000505077 ASAP3Q8TDY4 903 aa11.31□□□□□ -0.6
RFC1-210ENST00000505077 NLRP7Q8WX94 980 aa11.31□□□□□ -0.6
RFC1-210ENST00000505077 BSNDQ8WZ55 320 aa11.31□□□□□ -0.6
RFC1-210ENST00000505077 PRIMPOLQ96LW4 560 aa11.31□□□□□ -0.6
RFC1-210ENST00000505077 NLRP4Q96MN2 994 aa11.31□□□□□ -0.6
RFC1-210ENST00000505077 GCOM2Q9BZD3 368 aaPredicted RBP11.31□□□□□ -0.6
RFC1-210ENST00000505077 ADAMTS10Q9H324 1103 aa11.31□□□□□ -0.6
RFC1-210ENST00000505077 TBX21Q9UL17 535 aa11.31□□□□□ -0.6
RFC1-210ENST00000505077 ATP11BQ9Y2G3 1177 aa11.31□□□□□ -0.6
RFC1-210ENST00000505077 PCDHB13Q9Y5F0 798 aa11.31□□□□□ -0.6
RFC1-210ENST00000505077 TRPV2Q9Y5S1 764 aa11.31□□□□□ -0.6
RFC1-210ENST00000505077 TTC3P53804 2025 aa11.31□□□□□ -0.6
RFC1-210ENST00000505077 CCDC85CA6NKD9 419 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 CCDC169A6NNP5 214 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 GPR32O75388 356 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 PPP1R37O75864 691 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 CKBP12277 381 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 SELPP16109 830 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 EIF4BP23588 611 aaKnown RBP11.3□□□□□ -0.6
RFC1-210ENST00000505077 NLRP11P59045 1033 aaKnown RBP11.3□□□□□ -0.6
RFC1-210ENST00000505077 GTF2BQ00403 316 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 STIM1Q13586 685 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 MORC3Q14149 939 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 FAM187BQ17R55 369 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 BMT2Q1RMZ1 405 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 KIZQ2M2Z5 673 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 CT47A1Q5JQC4 288 aaPredicted RBP11.3□□□□□ -0.6
RFC1-210ENST00000505077 LRRC8DQ7L1W4 858 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 ZNF720Q7Z2F6 126 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 HAUS6Q7Z4H7 955 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 TMEM161BQ8NDZ6 487 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 SPDYE1Q8NFV5 336 aaPredicted RBP11.3□□□□□ -0.6
RFC1-210ENST00000505077 PPP1R13LQ8WUF5 828 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 DHX38Q92620 1227 aaKnown RBP11.3□□□□□ -0.6
RFC1-210ENST00000505077 ZBTB10Q96DT7 871 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 FIZ1Q96SL8 496 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 NOC4LQ9BVI4 516 aaKnown RBP11.3□□□□□ -0.6
RFC1-210ENST00000505077 CELF4Q9BZC1 486 aaKnown RBP11.3□□□□□ -0.6
RFC1-210ENST00000505077 HIPK3Q9H422 1215 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 TMEM134Q9H6X4 195 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 IFT122Q9HBG6 1241 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 DACH1Q9UI36 760 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 MAN1B1Q9UKM7 699 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 EXOC7Q9UPT5 735 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 ADGRA3Q8IWK6 1321 aa11.3□□□□□ -0.6
RFC1-210ENST00000505077 DENND3A2RUS2 1198 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 SFI1A8K8P3 1242 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 KIAA0355O15063 1070 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 SLC16A4O15374 487 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 GCNT3O95395 438 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 CAVIN2O95810 425 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 SRGAP2CP0DJJ0 459 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 DARSP14868 501 aaKnown RBP11.29□□□□□ -0.6
RFC1-210ENST00000505077 RFC2P35250 354 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 SNRPFP62306 86 aaKnown RBP11.29□□□□□ -0.6
RFC1-210ENST00000505077 MBTD1Q05BQ5 628 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 MGAT3Q09327 533 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 STRN3Q13033 797 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 STX1AQ16623 288 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 MAPK6Q16659 721 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 ZSCAN23Q3MJ62 389 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 FOXR2Q6PJQ5 311 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 SASS6Q6UVJ0 657 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 EPM2AIP1Q7L775 607 aaPredicted RBP11.29□□□□□ -0.6
RFC1-210ENST00000505077 MAP4K3Q8IVH8 894 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 KSR1Q8IVT5 923 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 MYOCDQ8IZQ8 938 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 GUF1Q8N442 669 aaKnown RBP11.29□□□□□ -0.6
RFC1-210ENST00000505077 MLKLQ8NB16 471 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 KIAA0895Q8NCT3 520 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 GOLGA5Q8TBA6 731 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 WNT8BQ93098 351 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 STRA6Q9BX79 667 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 CCDC113Q9H0I3 377 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 TMEM206Q9H813 350 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 TMEM39AQ9NV64 488 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 PRMT7Q9NVM4 692 aaPredicted RBP11.29□□□□□ -0.6
RFC1-210ENST00000505077 CGNQ9P2M7 1197 aaKnown RBP11.29□□□□□ -0.6
RFC1-210ENST00000505077 CDY2AQ9Y6F7 541 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 CNTNAP2Q9UHC6 1331 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 PTPRSQ13332 1948 aa11.29□□□□□ -0.6
RFC1-210ENST00000505077 A0A087WZ62 844 aa11.28□□□□□ -0.6
RFC1-210ENST00000505077 K7ERI5 159 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms