RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	TMEM184A	Q6ZMB5	413 aa		18.29	■□□□□ 0.52
DDR1-256	ENST00000505066	ANO5	Q75V66	913 aa		18.29	■□□□□ 0.52
DDR1-256	ENST00000505066	PPFIBP1	Q86W92	1011 aa		18.29	■□□□□ 0.52
DDR1-256	ENST00000505066	SLC39A11	Q8N1S5	342 aa		18.29	■□□□□ 0.52
DDR1-256	ENST00000505066	MRPL43	Q8N983	215 aa	Known RBP	18.29	■□□□□ 0.52
DDR1-256	ENST00000505066	PBXIP1	Q96AQ6	731 aa		18.29	■□□□□ 0.52
DDR1-256	ENST00000505066	AIFM3	Q96NN9	605 aa		18.29	■□□□□ 0.52
DDR1-256	ENST00000505066	SH2D3A	Q9BRG2	576 aa		18.29	■□□□□ 0.52
DDR1-256	ENST00000505066	GBP3	Q9H0R5	595 aa		18.29	■□□□□ 0.52
DDR1-256	ENST00000505066	TSHZ2	Q9NRE2	1034 aa		18.29	■□□□□ 0.52
DDR1-256	ENST00000505066	FAM105A	Q9NUU6	356 aa		18.29	■□□□□ 0.52
DDR1-256	ENST00000505066	HCST	Q9UBK5	93 aa		18.29	■□□□□ 0.52
DDR1-256	ENST00000505066	CNTNAP2	Q9UHC6	1331 aa		18.28	■□□□□ 0.52
DDR1-256	ENST00000505066	XIRP2	A4UGR9	3374 aa		18.28	■□□□□ 0.52
DDR1-256	ENST00000505066	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	18.28	■□□□□ 0.52
DDR1-256	ENST00000505066	LOC730098	B7Z3J9	87 aa		18.28	■□□□□ 0.52
DDR1-256	ENST00000505066		M0R2N6	131 aa		18.28	■□□□□ 0.52
DDR1-256	ENST00000505066	SLC37A4	O43826	429 aa		18.28	■□□□□ 0.52
DDR1-256	ENST00000505066	GLP2R	O95838	553 aa		18.28	■□□□□ 0.52
DDR1-256	ENST00000505066	PBX3	P40426	434 aa		18.28	■□□□□ 0.52
DDR1-256	ENST00000505066	MTHFR	P42898	656 aa		18.28	■□□□□ 0.52
DDR1-256	ENST00000505066	LRRC55	Q6ZSA7	311 aa		18.28	■□□□□ 0.52
DDR1-256	ENST00000505066	TRIM67	Q6ZTA4	783 aa		18.28	■□□□□ 0.52
DDR1-256	ENST00000505066	TPH2	Q8IWU9	490 aa		18.28	■□□□□ 0.52
DDR1-256	ENST00000505066	C4orf19	Q8IY42	314 aa		18.28	■□□□□ 0.52
DDR1-256	ENST00000505066	VPS52	Q8N1B4	723 aa		18.28	■□□□□ 0.52
DDR1-256	ENST00000505066	PRPF31	Q8WWY3	499 aa	Known RBP	18.28	■□□□□ 0.52
DDR1-256	ENST00000505066	LXN	Q9BS40	222 aa		18.28	■□□□□ 0.52
DDR1-256	ENST00000505066	EMILIN2	Q9BXX0	1053 aa		18.28	■□□□□ 0.52
DDR1-256	ENST00000505066	KCNMB3	Q9NPA1	279 aa		18.28	■□□□□ 0.52
DDR1-256	ENST00000505066	PCDHA12	Q9UN75	941 aa		18.28	■□□□□ 0.52
DDR1-256	ENST00000505066	TMEM150B	A6NC51	233 aa		18.27	■□□□□ 0.52
DDR1-256	ENST00000505066	TMEM221	A6NGB7	291 aa		18.27	■□□□□ 0.52
DDR1-256	ENST00000505066		M0R296	226 aa		18.27	■□□□□ 0.52
DDR1-256	ENST00000505066	ALDH2	P05091	517 aa		18.27	■□□□□ 0.52
DDR1-256	ENST00000505066	DRP2	Q13474	957 aa		18.27	■□□□□ 0.52
DDR1-256	ENST00000505066	CALCRL	Q16602	461 aa		18.27	■□□□□ 0.52
DDR1-256	ENST00000505066	LONRF3	Q496Y0	759 aa		18.27	■□□□□ 0.52
DDR1-256	ENST00000505066	ATAT1	Q5SQI0	421 aa		18.27	■□□□□ 0.52
DDR1-256	ENST00000505066	B3GNT9	Q6UX72	402 aa		18.27	■□□□□ 0.52
DDR1-256	ENST00000505066	ZNF598	Q86UK7	904 aa	Known RBP	18.27	■□□□□ 0.52
DDR1-256	ENST00000505066	MTR	Q99707	1265 aa		18.27	■□□□□ 0.52
DDR1-256	ENST00000505066	TRIM6	Q9C030	488 aa	Predicted RBP	18.27	■□□□□ 0.52
DDR1-256	ENST00000505066	DPP7	Q9UHL4	492 aa		18.27	■□□□□ 0.52
DDR1-256	ENST00000505066	SSX2IP	Q9Y2D8	614 aa		18.27	■□□□□ 0.52
DDR1-256	ENST00000505066	PCDHB2	Q9Y5E7	798 aa		18.27	■□□□□ 0.52
DDR1-256	ENST00000505066	C2orf71	A6NGG8	1288 aa		18.26	■□□□□ 0.51
DDR1-256	ENST00000505066	HIDE1	A8MVS5	230 aa		18.26	■□□□□ 0.51
DDR1-256	ENST00000505066	NT5C1B-RDH14	C9J2C7	533 aa		18.26	■□□□□ 0.51
DDR1-256	ENST00000505066	ZNF623	O75123	536 aa		18.26	■□□□□ 0.51
DDR1-256	ENST00000505066	NPEPPS	P55786	919 aa		18.26	■□□□□ 0.51
DDR1-256	ENST00000505066	ZXDA	P98168	799 aa		18.26	■□□□□ 0.51
DDR1-256	ENST00000505066	LAMTOR4	Q0VGL1	99 aa		18.26	■□□□□ 0.51
DDR1-256	ENST00000505066	EMC2	Q15006	297 aa		18.26	■□□□□ 0.51
DDR1-256	ENST00000505066	HFE2	Q6ZVN8	426 aa		18.26	■□□□□ 0.51
DDR1-256	ENST00000505066	DDX53	Q86TM3	631 aa	Known RBP	18.26	■□□□□ 0.51
DDR1-256	ENST00000505066	CABP7	Q86V35	215 aa		18.26	■□□□□ 0.51
DDR1-256	ENST00000505066	RNF149	Q8NC42	400 aa		18.26	■□□□□ 0.51
DDR1-256	ENST00000505066	TMEM143	Q96AN5	459 aa		18.26	■□□□□ 0.51
DDR1-256	ENST00000505066	APOL5	Q9BWW9	433 aa		18.26	■□□□□ 0.51
DDR1-256	ENST00000505066	RSAD1	Q9HA92	442 aa		18.26	■□□□□ 0.51
DDR1-256	ENST00000505066	AGPAT5	Q9NUQ2	364 aa		18.26	■□□□□ 0.51
DDR1-256	ENST00000505066	RNF19A	Q9NV58	838 aa		18.26	■□□□□ 0.51
DDR1-256	ENST00000505066	TPCN1	Q9ULQ1	816 aa		18.26	■□□□□ 0.51
DDR1-256	ENST00000505066	MUC3A	Q02505	3323 aa		18.26	■□□□□ 0.51
DDR1-256	ENST00000505066	EML1	O00423	815 aa		18.25	■□□□□ 0.51
DDR1-256	ENST00000505066	AXL	P30530	894 aa		18.25	■□□□□ 0.51
DDR1-256	ENST00000505066	GNL2	Q13823	731 aa	Known RBP	18.25	■□□□□ 0.51
DDR1-256	ENST00000505066	KSR1	Q8IVT5	923 aa		18.25	■□□□□ 0.51
DDR1-256	ENST00000505066	SUSD6	Q92537	303 aa		18.25	■□□□□ 0.51
DDR1-256	ENST00000505066	LPP	Q93052	612 aa		18.25	■□□□□ 0.51
DDR1-256	ENST00000505066	CCDC51	Q96ER9	411 aa		18.25	■□□□□ 0.51
DDR1-256	ENST00000505066	IGSF21	Q96ID5	467 aa		18.25	■□□□□ 0.51
DDR1-256	ENST00000505066	IRF2BPL	Q9H1B7	796 aa		18.25	■□□□□ 0.51
DDR1-256	ENST00000505066	ADAM7	Q9H2U9	754 aa		18.25	■□□□□ 0.51
DDR1-256	ENST00000505066	DHX33	Q9H6R0	707 aa	Known RBP	18.25	■□□□□ 0.51
DDR1-256	ENST00000505066	TBC1D13	Q9NVG8	400 aa		18.25	■□□□□ 0.51
DDR1-256	ENST00000505066	PPP4R2	Q9NY27	417 aa		18.25	■□□□□ 0.51
DDR1-256	ENST00000505066	VAV3	Q9UKW4	847 aa		18.25	■□□□□ 0.51
DDR1-256	ENST00000505066	FAN1	Q9Y2M0	1017 aa		18.25	■□□□□ 0.51
DDR1-256	ENST00000505066	INO80B-WBP1	J3KQ70	363 aa		18.24	■□□□□ 0.51
DDR1-256	ENST00000505066	EDIL3	O43854	480 aa		18.24	■□□□□ 0.51
DDR1-256	ENST00000505066	ITGA4	P13612	1032 aa		18.24	■□□□□ 0.51
DDR1-256	ENST00000505066	HOXD11	P31277	338 aa	Predicted RBP	18.24	■□□□□ 0.51
DDR1-256	ENST00000505066	AK2	P54819	239 aa		18.24	■□□□□ 0.51
DDR1-256	ENST00000505066	CYP4A11	Q02928	519 aa		18.24	■□□□□ 0.51
DDR1-256	ENST00000505066	SIGLEC14	Q08ET2	396 aa		18.24	■□□□□ 0.51
DDR1-256	ENST00000505066	TMEM132A	Q24JP5	1023 aa		18.24	■□□□□ 0.51
DDR1-256	ENST00000505066	NOTUM	Q6P988	496 aa		18.24	■□□□□ 0.51
DDR1-256	ENST00000505066	BMP8A	Q7Z5Y6	402 aa		18.24	■□□□□ 0.51
DDR1-256	ENST00000505066	POTED	Q86YR6	584 aa		18.24	■□□□□ 0.51
DDR1-256	ENST00000505066	DYDC2	Q96IM9	177 aa		18.24	■□□□□ 0.51
DDR1-256	ENST00000505066	BMP2K	Q9NSY1	1161 aa	Predicted RBP	18.24	■□□□□ 0.51
DDR1-256	ENST00000505066	DBR1	Q9UK59	544 aa	Known RBP	18.24	■□□□□ 0.51
DDR1-256	ENST00000505066	HCFC2	Q9Y5Z7	792 aa		18.24	■□□□□ 0.51
DDR1-256	ENST00000505066	MYO7A	Q13402	2215 aa		18.24	■□□□□ 0.51
DDR1-256	ENST00000505066	NEMF	O60524	1076 aa		18.23	■□□□□ 0.51
DDR1-256	ENST00000505066	CLASP2	O75122	1294 aa	Known RBP	18.23	■□□□□ 0.51
DDR1-256	ENST00000505066	OFD1	O75665	1012 aa		18.23	■□□□□ 0.51
DDR1-256	ENST00000505066	DGAT1	O75907	488 aa		18.23	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms