RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 TMEM143Q96AN5 459 aa10.29□□□□□ -0.76
TPM3-218ENST00000505010 IFT74Q96LB3 600 aa10.29□□□□□ -0.76
TPM3-218ENST00000505010 C16orf70Q9BSU1 422 aa10.29□□□□□ -0.76
TPM3-218ENST00000505010 PRDM12Q9H4Q4 367 aa10.29□□□□□ -0.76
TPM3-218ENST00000505010 DHX33Q9H6R0 707 aaKnown RBP10.29□□□□□ -0.76
TPM3-218ENST00000505010 COL1A2P08123 1366 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 ZMYM2Q9UBW7 1377 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 ZBTB42B2RXF5 422 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 H3BRB1 525 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 SLC16A4O15374 487 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 PQBP1O60828 265 aaKnown RBP10.28□□□□□ -0.76
TPM3-218ENST00000505010 DUSP11O75319 330 aaKnown RBP10.28□□□□□ -0.76
TPM3-218ENST00000505010 C6orf222P0C671 652 aaPredicted RBP10.28□□□□□ -0.76
TPM3-218ENST00000505010 MAPTP10636 758 aaKnown RBP10.28□□□□□ -0.76
TPM3-218ENST00000505010 RARBP10826 455 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 ZNF18P17022 549 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 ZNF75DP51815 510 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 SMTNP53814 917 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 NCKAP1LP55160 1127 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 FANCCQ00597 558 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 BEX3Q00994 111 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 PPFIA1Q13136 1202 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 ALCAMQ13740 583 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 FSCN1Q16658 493 aaKnown RBP10.28□□□□□ -0.76
TPM3-218ENST00000505010 ZNF484Q5JVG2 852 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 CDKAL1Q5VV42 579 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 CENPPQ6IPU0 288 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 CREBRFQ8IUR6 639 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 KSR1Q8IVT5 923 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 ANKRD20A12PQ8NF67 263 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 ASAP3Q8TDY4 903 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 FIZ1Q96SL8 496 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 CEP89Q96ST8 783 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 DUSP9Q99956 384 aaKnown RBP10.28□□□□□ -0.76
TPM3-218ENST00000505010 JPH2Q9BR39 696 aaPredicted RBP10.28□□□□□ -0.76
TPM3-218ENST00000505010 KIFC3Q9BVG8 833 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 SRRTQ9BXP5 876 aaKnown RBP10.28□□□□□ -0.76
TPM3-218ENST00000505010 RNPEPQ9H4A4 650 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 THAP9Q9H5L6 903 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 TUT1Q9H6E5 874 aaKnown RBP10.28□□□□□ -0.76
TPM3-218ENST00000505010 KMT5AQ9NQR1 393 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 IFNKQ9P0W0 207 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 MAGEC2Q9UBF1 373 aaPredicted RBP10.28□□□□□ -0.76
TPM3-218ENST00000505010 PHF24Q9UPV7 400 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 Q9Y3F1 56 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 PCDHB13Q9Y5F0 798 aa10.28□□□□□ -0.76
TPM3-218ENST00000505010 TRIP12Q14669 1992 aaPredicted RBP10.27□□□□□ -0.77
TPM3-218ENST00000505010 MYADML2A6NDP7 307 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 LRRIQ4A6NIV6 560 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 KCNJ18B7U540 433 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 CBFA2T2O43439 604 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 CALUO43852 315 aaPredicted RBP10.27□□□□□ -0.77
TPM3-218ENST00000505010 GAS2O43903 313 aaKnown RBP10.27□□□□□ -0.77
TPM3-218ENST00000505010 PPP1R37O75864 691 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 FGFR1OPO95684 399 aaKnown RBP10.27□□□□□ -0.77
TPM3-218ENST00000505010 F2P00734 622 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 INSRRP14616 1297 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 HOXD13P35453 343 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 PBX2P40425 430 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 NPTX2P47972 431 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 IRX5P78411 483 aaPredicted RBP10.27□□□□□ -0.77
TPM3-218ENST00000505010 SPAG1Q07617 926 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 KCNJ12Q14500 433 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 MFSD10Q14728 455 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 PPP2R5AQ15172 486 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 GRIK4Q16099 956 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 KNOP1Q1ED39 458 aaKnown RBP10.27□□□□□ -0.77
TPM3-218ENST00000505010 ZCWPW2Q504Y3 356 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 PPP4R3CPQ6ZMV5 832 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 ZNF720Q7Z2F6 126 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 HAUS6Q7Z4H7 955 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 RNF180Q86T96 592 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 FAM114A1Q8IWE2 563 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 EXOC8Q8IYI6 725 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 SYCP3Q8IZU3 236 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 LRRC71Q8N4P6 559 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 METTL13Q8N6R0 699 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 ZNF507Q8TCN5 953 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 SPIRE2Q8WWL2 714 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 TCP11Q8WWU5 503 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 CNOT6LQ96LI5 555 aaKnown RBP10.27□□□□□ -0.77
TPM3-218ENST00000505010 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.27□□□□□ -0.773e-15■■■□□ 16.8
TPM3-218ENST00000505010 PBX4Q9BYU1 374 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 XPO4Q9C0E2 1151 aaKnown RBP10.27□□□□□ -0.77
TPM3-218ENST00000505010 KCTD10Q9H3F6 313 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 SUGCTQ9HAC7 445 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 C17orf75Q9HAS0 396 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 SPC25Q9HBM1 224 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 XPNPEP3Q9NQH7 507 aa10.27□□□□□ -0.77
TPM3-218ENST00000505010 TYW1Q9NV66 732 aaKnown RBP10.27□□□□□ -0.77
TPM3-218ENST00000505010 DENND3A2RUS2 1198 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 GRXCR1A8MXD5 290 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 DCDC2CA8MYV0 355 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 H0YCG3 227 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 PDXKO00764 312 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 C22orf31O95567 290 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 TIMP1P01033 207 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 BMP1P13497 986 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 GLRA2P23416 452 aa10.26□□□□□ -0.77
TPM3-218ENST00000505010 EEF1GP26641 437 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms