RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 DDX1Q92499 740 aaKnown RBP6.87□□□□□ -1.31
GYPB-204ENST00000504951 STAMQ92783 540 aa6.87□□□□□ -1.31
GYPB-204ENST00000504951 TMEM169Q96HH4 297 aa6.87□□□□□ -1.31
GYPB-204ENST00000504951 APOL5Q9BWW9 433 aa6.87□□□□□ -1.31
GYPB-204ENST00000504951 TBC1D17Q9HA65 648 aa6.87□□□□□ -1.31
GYPB-204ENST00000504951 CHST12Q9NRB3 414 aa6.87□□□□□ -1.31
GYPB-204ENST00000504951 ZSCAN32Q9NX65 697 aa6.87□□□□□ -1.31
GYPB-204ENST00000504951 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.87□□□□□ -1.31
GYPB-204ENST00000504951 CDV3Q9UKY7 258 aaKnown RBP6.87□□□□□ -1.31
GYPB-204ENST00000504951 DOCK5Q9H7D0 1870 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 B4E1Z4 1266 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 IGHDP01880 384 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 CFHP08603 1231 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 FGFR1P11362 822 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 EPCAMP16422 314 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 SDSP20132 328 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 MARK3P27448 753 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 CLCN4P51793 760 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 BCAR1P56945 870 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 CDC42EP1Q00587 391 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 PRKCQQ04759 706 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 PTGDRQ13258 359 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 TMEM266Q2M3C6 531 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 B4GALNT3Q6L9W6 998 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 FAM228AQ86W67 206 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 VPS52Q8N1B4 723 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 C12orf76Q8N812 135 aaPredicted RBP6.86□□□□□ -1.31
GYPB-204ENST00000504951 PJA1Q8NG27 643 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 NETO1Q8TDF5 533 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 CUL5Q93034 780 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 RILPL2Q969X0 211 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 CLDN23Q96B33 292 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 IGSF21Q96ID5 467 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 PIGSQ96S52 555 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 NELL2Q99435 816 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 DSCC1Q9BVC3 393 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 SPZ1Q9BXG8 430 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 IL25Q9H293 177 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 JPH1Q9HDC5 661 aaPredicted RBP6.86□□□□□ -1.31
GYPB-204ENST00000504951 ARHGEF3Q9NR81 526 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 SLC9A2Q9UBY0 812 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 SSX2IPQ9Y2D8 614 aa6.86□□□□□ -1.31
GYPB-204ENST00000504951 KANSL1LA0AUZ9 987 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 FAM187AA6NFU0 413 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 ZBTB42B2RXF5 422 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 MAGEB2O15479 319 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 NARSO43776 548 aaKnown RBP6.85□□□□□ -1.31
GYPB-204ENST00000504951 N4BP1O75113 896 aaKnown RBP6.85□□□□□ -1.31
GYPB-204ENST00000504951 ZNF623O75123 536 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 S1PR4O95977 384 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 GALTP07902 379 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 SKIP12755 728 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 GLULP15104 373 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 ZSCAN20P17040 1043 aaPredicted RBP6.85□□□□□ -1.31
GYPB-204ENST00000504951 EIF4BP23588 611 aaKnown RBP6.85□□□□□ -1.31
GYPB-204ENST00000504951 RPS9P46781 194 aaKnown RBP6.85□□□□□ -1.31
GYPB-204ENST00000504951 IGBP1P78318 339 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 TMEM62Q0P6H9 643 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 MTMR1Q13613 665 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 PTPN14Q15678 1187 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 CLLU1OSQ5K130 101 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 ELMSAN1Q6PJG2 1045 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 DCLRE1AQ6PJP8 1040 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 CWC27Q6UX04 472 aaKnown RBP6.85□□□□□ -1.31
GYPB-204ENST00000504951 ABHD15Q6UXT9 468 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 TMC5Q6UXY8 1006 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 PLEKHM2Q8IWE5 1019 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 SMC5Q8IY18 1101 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 ABI1Q8IZP0 508 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 LINC01465Q8N7H1 131 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 SMARCC2Q8TAQ2 1214 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 ATRIPQ8WXE1 791 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 KLHL5Q96PQ7 755 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 HINFPQ9BQA5 517 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 LZTS2Q9BRK4 669 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 UBAC1Q9BSL1 405 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 MTA3Q9BTC8 594 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 IER2Q9BTL4 223 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 EMILIN2Q9BXX0 1053 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 DACT1Q9NYF0 836 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 NCDNQ9UBB6 729 aa6.85□□□□□ -1.31
GYPB-204ENST00000504951 FASNP49327 2511 aaKnown RBP6.85□□□□□ -1.31
GYPB-204ENST00000504951 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.84□□□□□ -1.31
GYPB-204ENST00000504951 EFEMP2O95967 443 aa6.84□□□□□ -1.31
GYPB-204ENST00000504951 DCNP07585 359 aaKnown RBP6.84□□□□□ -1.31
GYPB-204ENST00000504951 WEE2P0C1S8 567 aa6.84□□□□□ -1.31
GYPB-204ENST00000504951 LAMP2P13473 410 aa6.84□□□□□ -1.31
GYPB-204ENST00000504951 PMLP29590 882 aa6.84□□□□□ -1.31
GYPB-204ENST00000504951 LIMK1P53667 647 aa6.84□□□□□ -1.31
GYPB-204ENST00000504951 NRLP54845 237 aa6.84□□□□□ -1.31
GYPB-204ENST00000504951 ACTR2P61160 394 aa6.84□□□□□ -1.31
GYPB-204ENST00000504951 SP4Q02446 784 aa6.84□□□□□ -1.31
GYPB-204ENST00000504951 WTAPQ15007 396 aa6.84□□□□□ -1.31
GYPB-204ENST00000504951 IMMTQ16891 758 aaKnown RBP6.84□□□□□ -1.31
GYPB-204ENST00000504951 USP17L6PQ6QN14 398 aa6.84□□□□□ -1.31
GYPB-204ENST00000504951 NIPA1Q7RTP0 329 aa6.84□□□□□ -1.31
GYPB-204ENST00000504951 CELF5Q8N6W0 485 aaKnown RBP6.84□□□□□ -1.31
GYPB-204ENST00000504951 TMEM87AQ8NBN3 555 aa6.84□□□□□ -1.31
GYPB-204ENST00000504951 RIN2Q8WYP3 895 aaPredicted RBP6.84□□□□□ -1.31
GYPB-204ENST00000504951 MXRA8Q9BRK3 442 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms