RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 HSCBQ8IWL3 235 aa28.22■■■□□ 2.11
PVT1-201ENST00000504719 LRRC43Q8N309 656 aa28.22■■■□□ 2.11
PVT1-201ENST00000504719 RNF149Q8NC42 400 aa28.22■■■□□ 2.11
PVT1-201ENST00000504719 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.22■■■□□ 2.11
PVT1-201ENST00000504719 HELQQ8TDG4 1101 aa28.22■■■□□ 2.11
PVT1-201ENST00000504719 INTS4Q96HW7 963 aaKnown RBP28.22■■■□□ 2.11
PVT1-201ENST00000504719 FOXD4L1Q9NU39 408 aa28.22■■■□□ 2.11
PVT1-201ENST00000504719 AGPAT5Q9NUQ2 364 aa28.22■■■□□ 2.11
PVT1-201ENST00000504719 FGF18O76093 207 aa28.21■■■□□ 2.11
PVT1-201ENST00000504719 TOB1P50616 345 aaPredicted RBP28.21■■■□□ 2.11
PVT1-201ENST00000504719 MXD4Q14582 209 aaPredicted RBP28.21■■■□□ 2.11
PVT1-201ENST00000504719 NBR1Q14596 966 aa28.21■■■□□ 2.11
PVT1-201ENST00000504719 THNSL1Q8IYQ7 743 aa28.21■■■□□ 2.11
PVT1-201ENST00000504719 CCDC43Q96MW1 224 aaKnown RBP28.21■■■□□ 2.11
PVT1-201ENST00000504719 FAM105AQ9NUU6 356 aa28.21■■■□□ 2.11
PVT1-201ENST00000504719 CLDND1Q9NY35 253 aa28.21■■■□□ 2.11
PVT1-201ENST00000504719 NCOR1O75376 2440 aa28.2■■■□□ 2.11
PVT1-201ENST00000504719 ZNF623O75123 536 aa28.2■■■□□ 2.1
PVT1-201ENST00000504719 ARL2P36404 184 aa28.2■■■□□ 2.1
PVT1-201ENST00000504719 CTC1Q2NKJ3 1217 aa28.2■■■□□ 2.1
PVT1-201ENST00000504719 ERMNQ8TAM6 284 aa28.2■■■□□ 2.1
PVT1-201ENST00000504719 RPA1P27694 616 aa28.19■■■□□ 2.1
PVT1-201ENST00000504719 GTF2F1P35269 517 aaKnown RBP eCLIP28.19■■■□□ 2.1
PVT1-201ENST00000504719 RAB27AP51159 221 aa28.19■■■□□ 2.1
PVT1-201ENST00000504719 PTENP60484 403 aa28.19■■■□□ 2.1
PVT1-201ENST00000504719 POU5F1BQ06416 359 aa28.19■■■□□ 2.1
PVT1-201ENST00000504719 EP400NLQ6ZTU2 488 aa28.19■■■□□ 2.1
PVT1-201ENST00000504719 ASAP3Q8TDY4 903 aa28.19■■■□□ 2.1
PVT1-201ENST00000504719 NACC1Q96RE7 527 aa28.19■■■□□ 2.1
PVT1-201ENST00000504719 DBR1Q9UK59 544 aaKnown RBP28.19■■■□□ 2.1
PVT1-201ENST00000504719 MUC3AQ02505 3323 aa28.19■■■□□ 2.1
PVT1-201ENST00000504719 H3BQ06 376 aaPredicted RBP28.18■■■□□ 2.1
PVT1-201ENST00000504719 HOXA11P31270 313 aaPredicted RBP28.18■■■□□ 2.1
PVT1-201ENST00000504719 LTBRP36941 435 aa28.18■■■□□ 2.1
PVT1-201ENST00000504719 FXR2P51116 673 aaKnown RBP eCLIP28.18■■■□□ 2.1
PVT1-201ENST00000504719 PLCB3Q01970 1234 aa28.18■■■□□ 2.1
PVT1-201ENST00000504719 TFDP1Q14186 410 aa28.18■■■□□ 2.1
PVT1-201ENST00000504719 KCNT2Q6UVM3 1135 aa28.18■■■□□ 2.1
PVT1-201ENST00000504719 ADGRD2Q7Z7M1 963 aa28.18■■■□□ 2.1
PVT1-201ENST00000504719 IFNLR1Q8IU57 520 aaPredicted RBP28.18■■■□□ 2.1
PVT1-201ENST00000504719 RSPH1Q8WYR4 309 aa28.18■■■□□ 2.1
PVT1-201ENST00000504719 LPPQ93052 612 aa28.18■■■□□ 2.1
PVT1-201ENST00000504719 PPP2R3CQ969Q6 453 aa28.18■■■□□ 2.1
PVT1-201ENST00000504719 MRPL9Q9BYD2 267 aaKnown RBP28.18■■■□□ 2.1
PVT1-201ENST00000504719 IGFLR1Q9H665 355 aa28.18■■■□□ 2.1
PVT1-201ENST00000504719 PCDHB6Q9Y5E3 794 aa28.18■■■□□ 2.1
PVT1-201ENST00000504719 USO1O60763 962 aaKnown RBP28.17■■■□□ 2.1
PVT1-201ENST00000504719 PDCP20941 246 aa28.17■■■□□ 2.1
PVT1-201ENST00000504719 CAPSQ13938 189 aa28.17■■■□□ 2.1
PVT1-201ENST00000504719 PCBP1Q15365 356 aaKnown RBP eCLIP28.17■■■□□ 2.1
PVT1-201ENST00000504719 PUS10Q3MIT2 529 aaKnown RBP28.17■■■□□ 2.1
PVT1-201ENST00000504719 PTCRAQ6ISU1 281 aaPredicted RBP28.17■■■□□ 2.1
PVT1-201ENST00000504719 ZNF558Q96NG5 402 aa28.17■■■□□ 2.1
PVT1-201ENST00000504719 TLR9Q9NR96 1032 aa28.17■■■□□ 2.1
PVT1-201ENST00000504719 LZTS1Q9Y250 596 aa28.17■■■□□ 2.1
PVT1-201ENST00000504719 PCDHB2Q9Y5E7 798 aa28.17■■■□□ 2.1
PVT1-201ENST00000504719 PCDHGC5Q9Y5F6 944 aa28.17■■■□□ 2.1
PVT1-201ENST00000504719 MEIS3P2A8K0S8 358 aa28.16■■■□□ 2.1
PVT1-201ENST00000504719 MUTP22033 750 aa28.16■■■□□ 2.1
PVT1-201ENST00000504719 GLRA2P23416 452 aa28.16■■■□□ 2.1
PVT1-201ENST00000504719 ERVFC1P60507 584 aa28.16■■■□□ 2.1
PVT1-201ENST00000504719 PTGDRQ13258 359 aa28.16■■■□□ 2.1
PVT1-201ENST00000504719 LONRF3Q496Y0 759 aa28.16■■■□□ 2.1
PVT1-201ENST00000504719 UBXN11Q5T124 520 aa28.16■■■□□ 2.1
PVT1-201ENST00000504719 POTEGQ6S5H5 508 aa28.16■■■□□ 2.1
PVT1-201ENST00000504719 MRPS27Q92552 414 aaKnown RBP28.16■■■□□ 2.1
PVT1-201ENST00000504719 POLR3FQ9H1D9 316 aaPredicted RBP28.16■■■□□ 2.1
PVT1-201ENST00000504719 VPS37CA5D8V6 355 aaPredicted RBP28.15■■■□□ 2.1
PVT1-201ENST00000504719 GRXCR2A6NFK2 248 aa28.15■■■□□ 2.1
PVT1-201ENST00000504719 FSCN2O14926 492 aa28.15■■■□□ 2.1
PVT1-201ENST00000504719 PPM1AP35813 382 aa28.15■■■□□ 2.1
PVT1-201ENST00000504719 PBX3P40426 434 aa28.15■■■□□ 2.1
PVT1-201ENST00000504719 ADAM15Q13444 863 aa28.15■■■□□ 2.1
PVT1-201ENST00000504719 MRPL10Q7Z7H8 261 aaKnown RBP28.15■■■□□ 2.1
PVT1-201ENST00000504719 PGBD4Q96DM1 585 aa28.15■■■□□ 2.1
PVT1-201ENST00000504719 NFKBIZQ9BYH8 718 aa28.15■■■□□ 2.1
PVT1-201ENST00000504719 LINC01565O15544 149 aa28.14■■■□□ 2.1
PVT1-201ENST00000504719 OFD1O75665 1012 aa28.14■■■□□ 2.1
PVT1-201ENST00000504719 ERLIN2O94905 339 aa28.14■■■□□ 2.1
PVT1-201ENST00000504719 IL9P15248 144 aa28.14■■■□□ 2.1
PVT1-201ENST00000504719 AXLP30530 894 aa28.14■■■□□ 2.1
PVT1-201ENST00000504719 DLX2Q07687 328 aaPredicted RBP28.14■■■□□ 2.1
PVT1-201ENST00000504719 PDIA5Q14554 519 aa28.14■■■□□ 2.1
PVT1-201ENST00000504719 HAUS3Q68CZ6 603 aa28.14■■■□□ 2.1
PVT1-201ENST00000504719 PDE12Q6L8Q7 609 aaKnown RBP28.14■■■□□ 2.1
PVT1-201ENST00000504719 GLB1LQ6UWU2 654 aa28.14■■■□□ 2.1
PVT1-201ENST00000504719 MICAL1Q8TDZ2 1067 aa28.14■■■□□ 2.1
PVT1-201ENST00000504719 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.14■■■□□ 2.1
PVT1-201ENST00000504719 SPG21Q9NZD8 308 aa28.14■■■□□ 2.1
PVT1-201ENST00000504719 PUF60Q9UHX1 559 aaKnown RBP28.14■■■□□ 2.1
PVT1-201ENST00000504719 INO80B-WBP1J3KQ70 363 aa28.13■■■□□ 2.09
PVT1-201ENST00000504719 TSPAN1O60635 241 aa28.13■■■□□ 2.09
PVT1-201ENST00000504719 SYT1P21579 422 aa28.13■■■□□ 2.09
PVT1-201ENST00000504719 MBTD1Q05BQ5 628 aa28.13■■■□□ 2.09
PVT1-201ENST00000504719 ECM1Q16610 540 aa28.13■■■□□ 2.09
PVT1-201ENST00000504719 RILPL1Q5EBL4 403 aa28.13■■■□□ 2.09
PVT1-201ENST00000504719 NOMO2Q5JPE7 1267 aa28.13■■■□□ 2.09
PVT1-201ENST00000504719 AGMOQ6ZNB7 445 aa28.13■■■□□ 2.09
PVT1-201ENST00000504719 MAEAQ7L5Y9 396 aa28.13■■■□□ 2.09
PVT1-201ENST00000504719 SLC39A11Q8N1S5 342 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms