RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 TMTC3Q6ZXV5 915 aa10.28□□□□□ -0.76
DHFR-202ENST00000504396 KIAA0319LQ8IZA0 1049 aa10.28□□□□□ -0.76
DHFR-202ENST00000504396 LRRC43Q8N309 656 aa10.28□□□□□ -0.76
DHFR-202ENST00000504396 CASP10Q92851 521 aa10.28□□□□□ -0.76
DHFR-202ENST00000504396 HPS1Q92902 700 aa10.28□□□□□ -0.76
DHFR-202ENST00000504396 ZNF558Q96NG5 402 aa10.28□□□□□ -0.76
DHFR-202ENST00000504396 MFSD1Q9H3U5 465 aa10.28□□□□□ -0.76
DHFR-202ENST00000504396 TMEM161AQ9NX61 479 aa10.28□□□□□ -0.76
DHFR-202ENST00000504396 CDH22Q9UJ99 828 aa10.28□□□□□ -0.76
DHFR-202ENST00000504396 AKT3Q9Y243 479 aa10.28□□□□□ -0.76
DHFR-202ENST00000504396 COL1A2P08123 1366 aa10.28□□□□□ -0.76
DHFR-202ENST00000504396 HIDE1A8MVS5 230 aa10.27□□□□□ -0.77
DHFR-202ENST00000504396 hCG_1984214I3L0E3 225 aa10.27□□□□□ -0.77
DHFR-202ENST00000504396 FSCN2O14926 492 aa10.27□□□□□ -0.77
DHFR-202ENST00000504396 AXIN1O15169 862 aa10.27□□□□□ -0.77
DHFR-202ENST00000504396 AP1G2O75843 785 aa10.27□□□□□ -0.77
DHFR-202ENST00000504396 ATG7O95352 703 aa10.27□□□□□ -0.77
DHFR-202ENST00000504396 CCNE2O96020 404 aa10.27□□□□□ -0.77
DHFR-202ENST00000504396 PRKCSHP14314 528 aaPredicted RBP10.27□□□□□ -0.77
DHFR-202ENST00000504396 ZSCAN20P17040 1043 aaPredicted RBP10.27□□□□□ -0.77
DHFR-202ENST00000504396 HOXB8P17481 243 aaPredicted RBP10.27□□□□□ -0.77
DHFR-202ENST00000504396 PPM1AP35813 382 aa10.27□□□□□ -0.77
DHFR-202ENST00000504396 CRYBB1P53674 252 aaPredicted RBP10.27□□□□□ -0.77
DHFR-202ENST00000504396 ZNF484Q5JVG2 852 aa10.27□□□□□ -0.77
DHFR-202ENST00000504396 ZNF787Q6DD87 383 aa10.27□□□□□ -0.77
DHFR-202ENST00000504396 SWSAP1Q6NVH7 229 aa10.27□□□□□ -0.77
DHFR-202ENST00000504396 SYCE2Q6PIF2 218 aa10.27□□□□□ -0.77
DHFR-202ENST00000504396 KCNT2Q6UVM3 1135 aa10.27□□□□□ -0.77
DHFR-202ENST00000504396 FAM228AQ86W67 206 aa10.27□□□□□ -0.77
DHFR-202ENST00000504396 CCDC60Q8IWA6 550 aaPredicted RBP10.27□□□□□ -0.77
DHFR-202ENST00000504396 ZNF713Q8N859 430 aaPredicted RBP10.27□□□□□ -0.77
DHFR-202ENST00000504396 FANCBQ8NB91 859 aa10.27□□□□□ -0.77
DHFR-202ENST00000504396 RIPOR3Q96MK2 946 aa10.27□□□□□ -0.77
DHFR-202ENST00000504396 TMEM117Q9H0C3 514 aa10.27□□□□□ -0.77
DHFR-202ENST00000504396 GLT8D2Q9H1C3 349 aa10.27□□□□□ -0.77
DHFR-202ENST00000504396 CWH43Q9H720 699 aa10.27□□□□□ -0.77
DHFR-202ENST00000504396 NGRNQ9NPE2 291 aaKnown RBP10.27□□□□□ -0.77
DHFR-202ENST00000504396 RIC8AQ9NPQ8 531 aa10.27□□□□□ -0.77
DHFR-202ENST00000504396 LZTS1Q9Y250 596 aa10.27□□□□□ -0.77
DHFR-202ENST00000504396 EVPLQ92817 2033 aa10.26□□□□□ -0.77
DHFR-202ENST00000504396 MYH9P35579 1960 aaKnown RBP10.26□□□□□ -0.77
DHFR-202ENST00000504396 CNTNAP5Q8WYK1 1306 aa10.26□□□□□ -0.77
DHFR-202ENST00000504396 WEE2P0C1S8 567 aa10.26□□□□□ -0.77
DHFR-202ENST00000504396 VARSP26640 1264 aaKnown RBP10.26□□□□□ -0.77
DHFR-202ENST00000504396 METAP2P50579 478 aaKnown RBP eCLIP10.26□□□□□ -0.77
DHFR-202ENST00000504396 CLCN3P51790 818 aa10.26□□□□□ -0.77
DHFR-202ENST00000504396 PLCB3Q01970 1234 aa10.26□□□□□ -0.77
DHFR-202ENST00000504396 SMC1AQ14683 1233 aaKnown RBP10.26□□□□□ -0.77
DHFR-202ENST00000504396 BMS1Q14692 1282 aaKnown RBP10.26□□□□□ -0.77
DHFR-202ENST00000504396 NIPA1Q7RTP0 329 aa10.26□□□□□ -0.77
DHFR-202ENST00000504396 SGMS1Q86VZ5 419 aa10.26□□□□□ -0.77
DHFR-202ENST00000504396 PLA2G4DQ86XP0 818 aa10.26□□□□□ -0.77
DHFR-202ENST00000504396 ZNF668Q96K58 619 aaPredicted RBP10.26□□□□□ -0.77
DHFR-202ENST00000504396 PCMTD1Q96MG8 357 aaPredicted RBP10.26□□□□□ -0.77
DHFR-202ENST00000504396 MAP7D2Q96T17 732 aa10.26□□□□□ -0.77
DHFR-202ENST00000504396 S1PR5Q9H228 398 aa10.26□□□□□ -0.77
DHFR-202ENST00000504396 POMKQ9H5K3 350 aa10.26□□□□□ -0.77
DHFR-202ENST00000504396 SPG21Q9NZD8 308 aa10.26□□□□□ -0.77
DHFR-202ENST00000504396 DACH1Q9UI36 760 aa10.26□□□□□ -0.77
DHFR-202ENST00000504396 NAP1L2Q9ULW6 460 aaPredicted RBP10.26□□□□□ -0.77
DHFR-202ENST00000504396 SORCS3Q9UPU3 1222 aa10.26□□□□□ -0.77
DHFR-202ENST00000504396 SAMM50Q9Y512 469 aa10.26□□□□□ -0.77
DHFR-202ENST00000504396 IGKV6D-21A0A0A0MT36 114 aa10.25□□□□□ -0.77
DHFR-202ENST00000504396 SMCO2A6NFE2 343 aa10.25□□□□□ -0.77
DHFR-202ENST00000504396 C2CD4DB7Z1M9 353 aa10.25□□□□□ -0.77
DHFR-202ENST00000504396 C22orf31O95567 290 aa10.25□□□□□ -0.77
DHFR-202ENST00000504396 ASGR2P07307 311 aa10.25□□□□□ -0.77
DHFR-202ENST00000504396 AP3B2Q13367 1082 aa10.25□□□□□ -0.77
DHFR-202ENST00000504396 AGERQ15109 404 aa10.25□□□□□ -0.77
DHFR-202ENST00000504396 RARS2Q5T160 578 aaKnown RBP10.25□□□□□ -0.77
DHFR-202ENST00000504396 JAKMIP3Q5VZ66 844 aa10.25□□□□□ -0.77
DHFR-202ENST00000504396 ABHD15Q6UXT9 468 aa10.25□□□□□ -0.77
DHFR-202ENST00000504396 TMEM184AQ6ZMB5 413 aa10.25□□□□□ -0.77
DHFR-202ENST00000504396 UBALD2Q8IYN6 164 aa10.25□□□□□ -0.77
DHFR-202ENST00000504396 TDRD5Q8NAT2 981 aaKnown RBP10.25□□□□□ -0.77
DHFR-202ENST00000504396 RASGRP4Q8TDF6 673 aa10.25□□□□□ -0.77
DHFR-202ENST00000504396 NECTIN4Q96NY8 510 aa10.25□□□□□ -0.77
DHFR-202ENST00000504396 CASD1Q96PB1 797 aa10.25□□□□□ -0.77
DHFR-202ENST00000504396 ZNF577Q9BSK1 485 aa10.25□□□□□ -0.77
DHFR-202ENST00000504396 SMOC2Q9H3U7 446 aa10.25□□□□□ -0.77
DHFR-202ENST00000504396 ELAC1Q9H777 363 aaKnown RBP10.25□□□□□ -0.77
DHFR-202ENST00000504396 RBM28Q9NW13 759 aaKnown RBP10.25□□□□□ -0.77
DHFR-202ENST00000504396 DBR1Q9UK59 544 aaKnown RBP10.25□□□□□ -0.77
DHFR-202ENST00000504396 CEP131Q9UPN4 1083 aa10.25□□□□□ -0.77
DHFR-202ENST00000504396 HCFC2Q9Y5Z7 792 aa10.25□□□□□ -0.77
DHFR-202ENST00000504396 PLXNA3P51805 1871 aa10.25□□□□□ -0.77
DHFR-202ENST00000504396 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.24□□□□□ -0.77
DHFR-202ENST00000504396 IPO5O00410 1097 aaKnown RBP10.24□□□□□ -0.77
DHFR-202ENST00000504396 MEIS1O00470 390 aa10.24□□□□□ -0.77
DHFR-202ENST00000504396 SLC27A2O14975 620 aa10.24□□□□□ -0.77
DHFR-202ENST00000504396 BRD1O95696 1058 aa10.24□□□□□ -0.77
DHFR-202ENST00000504396 TMOD1P28289 359 aa10.24□□□□□ -0.77
DHFR-202ENST00000504396 SREBF1P36956 1147 aa10.24□□□□□ -0.77
DHFR-202ENST00000504396 RFC5P40937 340 aa10.24□□□□□ -0.77
DHFR-202ENST00000504396 MTHFRP42898 656 aa10.24□□□□□ -0.77
DHFR-202ENST00000504396 NLRP11P59045 1033 aaKnown RBP10.24□□□□□ -0.77
DHFR-202ENST00000504396 ITIH3Q06033 890 aa10.24□□□□□ -0.77
DHFR-202ENST00000504396 RTN1Q16799 776 aa10.24□□□□□ -0.77
DHFR-202ENST00000504396 C4orf48Q5BLP8 95 aa10.24□□□□□ -0.77
DHFR-202ENST00000504396 MCTP2Q6DN12 878 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms