RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 FHOD1Q9Y613 1164 aa10.67□□□□□ -0.7
COL1A1-210ENST00000504289 MACROD2A1Z1Q3 448 aa10.66□□□□□ -0.7
COL1A1-210ENST00000504289 F8VZ95 297 aa10.66□□□□□ -0.7
COL1A1-210ENST00000504289 ZNF862O60290 1169 aa10.66□□□□□ -0.7
COL1A1-210ENST00000504289 ZRANB2O95218 330 aaKnown RBP eCLIP10.66□□□□□ -0.7
COL1A1-210ENST00000504289 PIGRP01833 764 aa10.66□□□□□ -0.7
COL1A1-210ENST00000504289 ATP1A1P05023 1023 aaKnown RBP10.66□□□□□ -0.7
COL1A1-210ENST00000504289 CLCN6P51797 869 aa10.66□□□□□ -0.7
COL1A1-210ENST00000504289 PRKCEQ02156 737 aa10.66□□□□□ -0.7
COL1A1-210ENST00000504289 PTK2Q05397 1052 aa10.66□□□□□ -0.7
COL1A1-210ENST00000504289 GFPT1Q06210 699 aaPredicted RBP10.66□□□□□ -0.7
COL1A1-210ENST00000504289 KIF22Q14807 665 aa10.66□□□□□ -0.7
COL1A1-210ENST00000504289 KIAA0753Q2KHM9 967 aa10.66□□□□□ -0.7
COL1A1-210ENST00000504289 LRRN4CLQ8ND94 238 aa10.66□□□□□ -0.7
COL1A1-210ENST00000504289 LMO3Q8TAP4 145 aa10.66□□□□□ -0.7
COL1A1-210ENST00000504289 PARD6BQ9BYG5 372 aa10.66□□□□□ -0.7
COL1A1-210ENST00000504289 ZNF302Q9NR11 478 aa10.66□□□□□ -0.7
COL1A1-210ENST00000504289 ARHGAP28Q9P2N2 729 aa10.66□□□□□ -0.7
COL1A1-210ENST00000504289 TRIM10Q9UDY6 481 aa10.66□□□□□ -0.7
COL1A1-210ENST00000504289 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.66□□□□□ -0.7
COL1A1-210ENST00000504289 ADAMTS1Q9UHI8 967 aa10.66□□□□□ -0.7
COL1A1-210ENST00000504289 NAGPAQ9UK23 515 aa10.66□□□□□ -0.7
COL1A1-210ENST00000504289 SLC45A1Q9Y2W3 748 aa10.66□□□□□ -0.7
COL1A1-210ENST00000504289 V9GYY5 206 aaPredicted RBP10.66□□□□□ -0.7
COL1A1-210ENST00000504289 SYNGAP1Q96PV0 1343 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 A0A087X0T9 212 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 DENND3A2RUS2 1198 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 GRID2IPA4D2P6 1211 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 IQCA1LA6NCM1 817 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 DCAF8L1A6NGE4 600 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 SLC16A4O15374 487 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 ZC3H11AO75152 810 aaKnown RBP eCLIP10.65□□□□□ -0.7
COL1A1-210ENST00000504289 OATP04181 439 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 H2AFZP0C0S5 128 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 FAM228BP0C875 321 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 ACTN1P12814 892 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 ERCC3P19447 782 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 CNGA1P29973 690 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 NAMPTP43490 491 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 SLC26A2P50443 739 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 TCEAL1Q15170 157 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 EPC2Q52LR7 807 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 GLE1Q53GS7 698 aaKnown RBP10.65□□□□□ -0.7
COL1A1-210ENST00000504289 TREML2Q5T2D2 321 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 LDLRAD1Q5T700 205 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 UTP14CQ5TAP6 766 aaKnown RBP10.65□□□□□ -0.7
COL1A1-210ENST00000504289 C9orf131Q5VYM1 1079 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 SLFN12LQ6IEE8 588 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 ALKBH5Q6P6C2 394 aaKnown RBP10.65□□□□□ -0.7
COL1A1-210ENST00000504289 METTL7BQ6UX53 244 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 GADL1Q6ZQY3 521 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 H2AFVQ71UI9 128 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 ENOSF1Q7L5Y1 443 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 ZNF571Q7Z3V5 609 aaPredicted RBP10.65□□□□□ -0.7
COL1A1-210ENST00000504289 PNMA8AQ86V59 439 aaPredicted RBP10.65□□□□□ -0.7
COL1A1-210ENST00000504289 CCDC60Q8IWA6 550 aaPredicted RBP10.65□□□□□ -0.7
COL1A1-210ENST00000504289 SYCE1Q8N0S2 351 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 MMGT1Q8N4V1 131 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 SLC30A5Q8TAD4 765 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 MORC4Q8TE76 937 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 CDCA5Q96FF9 252 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 MFSD14AQ96MC6 490 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 JPH2Q9BR39 696 aaPredicted RBP10.65□□□□□ -0.7
COL1A1-210ENST00000504289 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.65□□□□□ -0.7
COL1A1-210ENST00000504289 ASCC2Q9H1I8 757 aaPredicted RBP10.65□□□□□ -0.7
COL1A1-210ENST00000504289 DHX33Q9H6R0 707 aaKnown RBP10.65□□□□□ -0.7
COL1A1-210ENST00000504289 BCAS3Q9H6U6 928 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 BTBD7Q9P203 1132 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 DNAJC12Q9UKB3 198 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 PNMA3Q9UL41 463 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 STYXL1Q9Y6J8 313 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 DUSP10Q9Y6W6 482 aa10.65□□□□□ -0.7
COL1A1-210ENST00000504289 MYH9P35579 1960 aaKnown RBP10.65□□□□□ -0.71
COL1A1-210ENST00000504289 OTOFQ9HC10 1997 aa10.65□□□□□ -0.71
COL1A1-210ENST00000504289 UTRNP46939 3433 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 ARID2Q68CP9 1835 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 CCDC169A6NNP5 214 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 LDHAP00338 332 aaKnown RBP10.64□□□□□ -0.71
COL1A1-210ENST00000504289 EPHX2P34913 555 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 PAFAH1B1P43034 410 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 MXI1P50539 228 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 GPC3P51654 580 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 HADHBP55084 474 aaKnown RBP10.64□□□□□ -0.71
COL1A1-210ENST00000504289 C1QTNF8P60827 252 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 DRAP1Q14919 205 aaPredicted RBP10.64□□□□□ -0.71
COL1A1-210ENST00000504289 CLUL1Q15846 466 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 SNRNP35Q16560 246 aaKnown RBP10.64□□□□□ -0.71
COL1A1-210ENST00000504289 MAP9Q49MG5 647 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 CBWD6Q4V339 395 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 CBWD3Q5JTY5 395 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 CBWD5Q5RIA9 395 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 PLA2G4FQ68DD2 849 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 KRT39Q6A163 491 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 CC2D1AQ6P1N0 951 aaPredicted RBP10.64□□□□□ -0.71
COL1A1-210ENST00000504289 KRT222Q8N1A0 295 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 PARD3BQ8TEW8 1205 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 SLC7A3Q8WY07 619 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 SEPT1Q8WYJ6 367 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 DHX38Q92620 1227 aaKnown RBP10.64□□□□□ -0.71
COL1A1-210ENST00000504289 SYT11Q9BT88 431 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms