RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 PTGIRP43119 386 aa16.19■□□□□ 0.18
SNF8-203ENST00000504000 CRKP46108 304 aa16.19■□□□□ 0.18
SNF8-203ENST00000504000 BFSP1Q12934 665 aa16.19■□□□□ 0.18
SNF8-203ENST00000504000 XRCC4Q13426 336 aa16.19■□□□□ 0.18
SNF8-203ENST00000504000 CTTNQ14247 550 aaKnown RBP16.19■□□□□ 0.18
SNF8-203ENST00000504000 CYP1B1Q16678 543 aa16.19■□□□□ 0.18
SNF8-203ENST00000504000 ZDHHC24Q6UX98 284 aa16.19■□□□□ 0.18
SNF8-203ENST00000504000 CPLX4Q7Z7G2 160 aa16.19■□□□□ 0.18
SNF8-203ENST00000504000 COL23A1Q86Y22 540 aaPredicted RBP16.19■□□□□ 0.18
SNF8-203ENST00000504000 FAM178BQ8IXR5 827 aa16.19■□□□□ 0.18
SNF8-203ENST00000504000 NGLY1Q96IV0 654 aa16.19■□□□□ 0.18
SNF8-203ENST00000504000 CCDC114Q96M63 670 aa16.19■□□□□ 0.18
SNF8-203ENST00000504000 AGPAT1Q99943 283 aa16.19■□□□□ 0.18
SNF8-203ENST00000504000 STMN4Q9H169 189 aaPredicted RBP16.19■□□□□ 0.18
SNF8-203ENST00000504000 SLC40A1Q9NP59 571 aa16.19■□□□□ 0.18
SNF8-203ENST00000504000 ALG6Q9Y672 507 aa16.19■□□□□ 0.18
SNF8-203ENST00000504000 DCDC2CA8MYV0 355 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 POLRMTO00411 1230 aaKnown RBP16.18■□□□□ 0.18
SNF8-203ENST00000504000 MAPTP10636 758 aaKnown RBP16.18■□□□□ 0.18
SNF8-203ENST00000504000 SCNN1DP51172 638 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 MYL7Q01449 175 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 ADCY2Q08462 1091 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 ALCAMQ13740 583 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 ITIH4Q14624 930 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 SLMAPQ14BN4 828 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 PTPROQ16827 1216 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 TNFAIP8L3Q5GJ75 292 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 DENND2CQ68D51 928 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 PODNQ7Z5L7 613 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 ZFPM1Q8IX07 1006 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 CCT6BQ92526 530 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 ARHGEF26Q96DR7 871 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 ZNF317Q96PQ6 595 aaPredicted RBP16.18■□□□□ 0.18
SNF8-203ENST00000504000 MYCBPQ99417 103 aaPredicted RBP16.18■□□□□ 0.18
SNF8-203ENST00000504000 WDR11Q9BZH6 1224 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 THAP2Q9H0W7 228 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 KCNQ5Q9NR82 932 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 COG5Q9UP83 839 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 CAND2O75155 1236 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 DNAJC8O75937 253 aaPredicted RBP16.18■□□□□ 0.18
SNF8-203ENST00000504000 ABCB4P21439 1286 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 POLD1P28340 1107 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 PRELPP51888 382 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 IRX3P78415 501 aaPredicted RBP16.18■□□□□ 0.18
SNF8-203ENST00000504000 CETN1Q12798 172 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 ZC2HC1CQ53FD0 456 aaPredicted RBP16.18■□□□□ 0.18
SNF8-203ENST00000504000 C12orf56Q8IXR9 622 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 FUKQ8N0W3 1084 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 PROCA1Q8NCQ7 364 aaPredicted RBP16.18■□□□□ 0.18
SNF8-203ENST00000504000 CYP2W1Q8TAV3 490 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 PIGOQ8TEQ8 1089 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 ALG3Q92685 438 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 SGSM3Q96HU1 749 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 ERVK-5Q9HDB9 667 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 LRRC4BQ9NT99 713 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 GRHL1Q9NZI5 618 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 MTRF1LQ9UGC7 380 aaKnown RBP16.18■□□□□ 0.18
SNF8-203ENST00000504000 LTBP4Q8N2S1 1624 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 SPATA31A6Q5VVP1 1343 aa16.18■□□□□ 0.18
SNF8-203ENST00000504000 SFI1A8K8P3 1242 aa16.17■□□□□ 0.18
SNF8-203ENST00000504000 DNM1LO00429 736 aa16.17■□□□□ 0.18
SNF8-203ENST00000504000 MAPK13O15264 365 aa16.17■□□□□ 0.18
SNF8-203ENST00000504000 GSTA1P08263 222 aa16.17■□□□□ 0.18
SNF8-203ENST00000504000 GZMAP12544 262 aa16.17■□□□□ 0.18
SNF8-203ENST00000504000 ALAS1P13196 640 aa16.17■□□□□ 0.18
SNF8-203ENST00000504000 GPC5P78333 572 aa16.17■□□□□ 0.18
SNF8-203ENST00000504000 PRPF4BQ13523 1007 aaKnown RBP16.17■□□□□ 0.18
SNF8-203ENST00000504000 USH1GQ495M9 461 aa16.17■□□□□ 0.18
SNF8-203ENST00000504000 LRCH2Q5VUJ6 765 aa16.17■□□□□ 0.18
SNF8-203ENST00000504000 PHLDB3Q6NSJ2 640 aa16.17■□□□□ 0.18
SNF8-203ENST00000504000 B3GNT9Q6UX72 402 aa16.17■□□□□ 0.18
SNF8-203ENST00000504000 INTS8Q75QN2 995 aaKnown RBP16.17■□□□□ 0.18
SNF8-203ENST00000504000 PIGWQ7Z7B1 504 aa16.17■□□□□ 0.18
SNF8-203ENST00000504000 TPH2Q8IWU9 490 aa16.17■□□□□ 0.18
SNF8-203ENST00000504000 DYDC2Q96IM9 177 aa16.17■□□□□ 0.18
SNF8-203ENST00000504000 ZSWIM1Q9BR11 485 aa16.17■□□□□ 0.18
SNF8-203ENST00000504000 WNT8AQ9H1J5 351 aa16.17■□□□□ 0.18
SNF8-203ENST00000504000 BCAS3Q9H6U6 928 aa16.17■□□□□ 0.18
SNF8-203ENST00000504000 FAM198AQ9UFP1 575 aa16.17■□□□□ 0.18
SNF8-203ENST00000504000 PCDHA3Q9Y5H8 950 aa16.17■□□□□ 0.18
SNF8-203ENST00000504000 LOXHD1Q8IVV2 1947 aa16.17■□□□□ 0.18
SNF8-203ENST00000504000 ZNF536O15090 1300 aa16.17■□□□□ 0.18
SNF8-203ENST00000504000 DDTLA6NHG4 134 aaPredicted RBP16.16■□□□□ 0.18
SNF8-203ENST00000504000 SCTRP47872 440 aa16.16■□□□□ 0.18
SNF8-203ENST00000504000 PEX5P50542 639 aa16.16■□□□□ 0.18
SNF8-203ENST00000504000 SNRPFP62306 86 aaKnown RBP16.16■□□□□ 0.18
SNF8-203ENST00000504000 ABCB5Q2M3G0 1257 aa16.16■□□□□ 0.18
SNF8-203ENST00000504000 NBPF9Q3BBW0 867 aa16.16■□□□□ 0.18
SNF8-203ENST00000504000 CYFIP1Q7L576 1253 aa16.16■□□□□ 0.18
SNF8-203ENST00000504000 ANKS4BQ8N8V4 417 aa16.16■□□□□ 0.18
SNF8-203ENST00000504000 PRELID2Q8N945 189 aa16.16■□□□□ 0.18
SNF8-203ENST00000504000 CCDC197Q8NCU1 140 aa16.16■□□□□ 0.18
SNF8-203ENST00000504000 ATXN2LQ8WWM7 1075 aaKnown RBP16.16■□□□□ 0.18
SNF8-203ENST00000504000 GLG1Q92896 1179 aa16.16■□□□□ 0.18
SNF8-203ENST00000504000 WDR18Q9BV38 432 aa16.16■□□□□ 0.18
SNF8-203ENST00000504000 ROPN1BQ9BZX4 212 aaPredicted RBP16.16■□□□□ 0.18
SNF8-203ENST00000504000 TAOK3Q9H2K8 898 aa16.16■□□□□ 0.18
SNF8-203ENST00000504000 TMEM206Q9H813 350 aa16.16■□□□□ 0.18
SNF8-203ENST00000504000 ROPN1Q9HAT0 212 aaPredicted RBP16.16■□□□□ 0.18
SNF8-203ENST00000504000 ATRNL1Q5VV63 1379 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms