RNA–Protein interactions for RNA: ENST00000503495.5

DDR1-249, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-249ENST00000503495 FAM105AQ9NUU6 356 aa16.87■□□□□ 0.29
DDR1-249ENST00000503495 TBC1D13Q9NVG8 400 aa16.87■□□□□ 0.29
DDR1-249ENST00000503495 CDH22Q9UJ99 828 aa16.87■□□□□ 0.29
DDR1-249ENST00000503495 PIN4Q9Y237 131 aaKnown RBP16.87■□□□□ 0.29
DDR1-249ENST00000503495 C2CD4DB7Z1M9 353 aa16.86■□□□□ 0.29
DDR1-249ENST00000503495 ZC3H11AO75152 810 aaKnown RBP eCLIP16.86■□□□□ 0.29
DDR1-249ENST00000503495 MTMR3Q13615 1198 aa16.86■□□□□ 0.29
DDR1-249ENST00000503495 NONOQ15233 471 aaKnown RBP eCLIP16.86■□□□□ 0.29
DDR1-249ENST00000503495 NOMO2Q5JPE7 1267 aa16.86■□□□□ 0.29
DDR1-249ENST00000503495 GLB1LQ6UWU2 654 aa16.86■□□□□ 0.29
DDR1-249ENST00000503495 TMEM173Q86WV6 379 aaPredicted RBP16.86■□□□□ 0.29
DDR1-249ENST00000503495 PLCD3Q8N3E9 789 aa16.86■□□□□ 0.29
DDR1-249ENST00000503495 KREMEN2Q8NCW0 462 aa16.86■□□□□ 0.29
DDR1-249ENST00000503495 SLC22A17Q8WUG5 538 aa16.86■□□□□ 0.29
DDR1-249ENST00000503495 LPPQ93052 612 aa16.86■□□□□ 0.29
DDR1-249ENST00000503495 PGBD4Q96DM1 585 aa16.86■□□□□ 0.29
DDR1-249ENST00000503495 IFT122Q9HBG6 1241 aa16.86■□□□□ 0.29
DDR1-249ENST00000503495 DZANK1Q9NVP4 752 aa16.86■□□□□ 0.29
DDR1-249ENST00000503495 STK39Q9UEW8 545 aa16.86■□□□□ 0.29
DDR1-249ENST00000503495 CPLX1O14810 134 aa16.85■□□□□ 0.29
DDR1-249ENST00000503495 DKC1O60832 514 aaKnown RBP eCLIP16.85■□□□□ 0.29
DDR1-249ENST00000503495 SP100P23497 879 aaPredicted RBP16.85■□□□□ 0.29
DDR1-249ENST00000503495 PPP2R5CQ13362 524 aa16.85■□□□□ 0.29
DDR1-249ENST00000503495 ATAT1Q5SQI0 421 aa16.85■□□□□ 0.29
DDR1-249ENST00000503495 KIAA1841Q6NSI8 718 aa16.85■□□□□ 0.29
DDR1-249ENST00000503495 CATSPER4Q7RTX7 472 aa16.85■□□□□ 0.29
DDR1-249ENST00000503495 KSR1Q8IVT5 923 aa16.85■□□□□ 0.29
DDR1-249ENST00000503495 EXOC8Q8IYI6 725 aa16.85■□□□□ 0.29
DDR1-249ENST00000503495 ZDHHC14Q8IZN3 488 aa16.85■□□□□ 0.29
DDR1-249ENST00000503495 CYP26B1Q9NR63 512 aa16.85■□□□□ 0.29
DDR1-249ENST00000503495 TSHZ2Q9NRE2 1034 aa16.85■□□□□ 0.29
DDR1-249ENST00000503495 DDX25Q9UHL0 483 aaKnown RBP16.85■□□□□ 0.29
DDR1-249ENST00000503495 USTQ9Y2C2 406 aa16.85■□□□□ 0.29
DDR1-249ENST00000503495 PPME1Q9Y570 386 aa16.85■□□□□ 0.29
DDR1-249ENST00000503495 ZDBF2Q9HCK1 2354 aa16.85■□□□□ 0.29
DDR1-249ENST00000503495 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.84■□□□□ 0.29
DDR1-249ENST00000503495 MEIS3P2A8K0S8 358 aa16.84■□□□□ 0.29
DDR1-249ENST00000503495 EML1O00423 815 aa16.84■□□□□ 0.29
DDR1-249ENST00000503495 BRD1O95696 1058 aa16.84■□□□□ 0.29
DDR1-249ENST00000503495 CA8P35219 290 aa16.84■□□□□ 0.29
DDR1-249ENST00000503495 QARSP47897 775 aaKnown RBP16.84■□□□□ 0.29
DDR1-249ENST00000503495 RNASELQ05823 741 aaKnown RBP16.84■□□□□ 0.29
DDR1-249ENST00000503495 LONRF3Q496Y0 759 aa16.84■□□□□ 0.29
DDR1-249ENST00000503495 PPP4R3AQ6IN85 833 aa16.84■□□□□ 0.29
DDR1-249ENST00000503495 CPLX2Q6PUV4 134 aaKnown RBP16.84■□□□□ 0.29
DDR1-249ENST00000503495 KRT25Q7Z3Z0 450 aa16.84■□□□□ 0.29
DDR1-249ENST00000503495 SRGAP1Q7Z6B7 1085 aa16.84■□□□□ 0.29
DDR1-249ENST00000503495 MRPL10Q7Z7H8 261 aaKnown RBP16.84■□□□□ 0.29
DDR1-249ENST00000503495 PPFIBP1Q86W92 1011 aa16.84■□□□□ 0.29
DDR1-249ENST00000503495 TMEM87AQ8NBN3 555 aa16.84■□□□□ 0.29
DDR1-249ENST00000503495 FAM20AQ96MK3 541 aa16.84■□□□□ 0.29
DDR1-249ENST00000503495 NLRP4Q96MN2 994 aa16.84■□□□□ 0.29
DDR1-249ENST00000503495 TM6SF1Q9BZW5 370 aa16.84■□□□□ 0.29
DDR1-249ENST00000503495 DHX33Q9H6R0 707 aaKnown RBP16.84■□□□□ 0.29
DDR1-249ENST00000503495 KCNMB3Q9NPA1 279 aa16.84■□□□□ 0.29
DDR1-249ENST00000503495 AGPAT5Q9NUQ2 364 aa16.84■□□□□ 0.29
DDR1-249ENST00000503495 DNAJB4Q9UDY4 337 aa16.84■□□□□ 0.29
DDR1-249ENST00000503495 CYP46A1Q9Y6A2 500 aa16.84■□□□□ 0.29
DDR1-249ENST00000503495 USP34Q70CQ2 3546 aa16.83■□□□□ 0.29
DDR1-249ENST00000503495 SLC37A4O43826 429 aa16.83■□□□□ 0.28
DDR1-249ENST00000503495 ST18O60284 1047 aa16.83■□□□□ 0.28
DDR1-249ENST00000503495 PDGFBP01127 241 aaPredicted RBP16.83■□□□□ 0.28
DDR1-249ENST00000503495 P4HBP07237 508 aaKnown RBP16.83■□□□□ 0.28
DDR1-249ENST00000503495 EPCAMP16422 314 aa16.83■□□□□ 0.28
DDR1-249ENST00000503495 SLC11A1P49279 550 aa16.83■□□□□ 0.28
DDR1-249ENST00000503495 INF2Q27J81 1249 aa16.83■□□□□ 0.28
DDR1-249ENST00000503495 RARS2Q5T160 578 aaKnown RBP16.83■□□□□ 0.28
DDR1-249ENST00000503495 PLA2G4FQ68DD2 849 aa16.83■□□□□ 0.28
DDR1-249ENST00000503495 ZNF280BQ86YH2 543 aa16.83■□□□□ 0.28
DDR1-249ENST00000503495 C12orf76Q8N812 135 aaPredicted RBP16.83■□□□□ 0.28
DDR1-249ENST00000503495 BCL7CQ8WUZ0 217 aaPredicted RBP16.83■□□□□ 0.28
DDR1-249ENST00000503495 AUTS2Q8WXX7 1259 aa16.83■□□□□ 0.28
DDR1-249ENST00000503495 SLC7A3Q8WY07 619 aa16.83■□□□□ 0.28
DDR1-249ENST00000503495 AIFM3Q96NN9 605 aa16.83■□□□□ 0.28
DDR1-249ENST00000503495 PHF20Q9BVI0 1012 aa16.83■□□□□ 0.28
DDR1-249ENST00000503495 KANSL3Q9P2N6 904 aa16.83■□□□□ 0.28
DDR1-249ENST00000503495 DBR1Q9UK59 544 aaKnown RBP16.83■□□□□ 0.28
DDR1-249ENST00000503495 VAV3Q9UKW4 847 aa16.83■□□□□ 0.28
DDR1-249ENST00000503495 INPP5FQ9Y2H2 1132 aa16.83■□□□□ 0.28
DDR1-249ENST00000503495 PCDHB2Q9Y5E7 798 aa16.83■□□□□ 0.28
DDR1-249ENST00000503495 COL4A3BPQ9Y5P4 624 aa16.83■□□□□ 0.28
DDR1-249ENST00000503495 TBX3O15119 743 aa16.82■□□□□ 0.28
DDR1-249ENST00000503495 ALDH2P05091 517 aa16.82■□□□□ 0.28
DDR1-249ENST00000503495 NPEPPSP55786 919 aa16.82■□□□□ 0.28
DDR1-249ENST00000503495 LETM2Q2VYF4 491 aa16.82■□□□□ 0.28
DDR1-249ENST00000503495 KANK3Q6NY19 840 aa16.82■□□□□ 0.28
DDR1-249ENST00000503495 AGMOQ6ZNB7 445 aa16.82■□□□□ 0.28
DDR1-249ENST00000503495 C4orf19Q8IY42 314 aa16.82■□□□□ 0.28
DDR1-249ENST00000503495 ZNF579Q8NAF0 562 aaKnown RBP16.82■□□□□ 0.28
DDR1-249ENST00000503495 TDRD5Q8NAT2 981 aaKnown RBP16.82■□□□□ 0.28
DDR1-249ENST00000503495 PRPF31Q8WWY3 499 aaKnown RBP16.82■□□□□ 0.28
DDR1-249ENST00000503495 VN1R3Q9BXE9 311 aa16.82■□□□□ 0.28
DDR1-249ENST00000503495 CNTNAP2Q9UHC6 1331 aa16.81■□□□□ 0.28
DDR1-249ENST00000503495 ASAP2O43150 1006 aa16.81■□□□□ 0.28
DDR1-249ENST00000503495 GAS2O43903 313 aaKnown RBP16.81■□□□□ 0.28
DDR1-249ENST00000503495 LILRB3O75022 631 aa16.81■□□□□ 0.28
DDR1-249ENST00000503495 DDHD2O94830 711 aa16.81■□□□□ 0.28
DDR1-249ENST00000503495 WEE2P0C1S8 567 aa16.81■□□□□ 0.28
DDR1-249ENST00000503495 GCFC2P16383 781 aaKnown RBP16.81■□□□□ 0.28
DDR1-249ENST00000503495 HOXA11P31270 313 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms