RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 CDHR1Q96JP9 859 aa24.45■■□□□ 1.51
PCDH1-204ENST00000503492 ANKRD63C9JTQ0 380 aa24.45■■□□□ 1.5
PCDH1-204ENST00000503492 SORBS3O60504 671 aa24.45■■□□□ 1.5
PCDH1-204ENST00000503492 SMC1AQ14683 1233 aaKnown RBP24.45■■□□□ 1.5
PCDH1-204ENST00000503492 TREML2Q5T2D2 321 aa24.45■■□□□ 1.5
PCDH1-204ENST00000503492 CCDC181Q5TID7 509 aa24.45■■□□□ 1.5
PCDH1-204ENST00000503492 CCDC60Q8IWA6 550 aaPredicted RBP24.45■■□□□ 1.5
PCDH1-204ENST00000503492 U2AF1L4Q8WU68 220 aaKnown RBP24.45■■□□□ 1.5
PCDH1-204ENST00000503492 PACSIN2Q9UNF0 486 aaPredicted RBP24.45■■□□□ 1.5
PCDH1-204ENST00000503492 ATP8B3O60423 1300 aa24.44■■□□□ 1.5
PCDH1-204ENST00000503492 LOC285556D6RIA3 1793 aa24.44■■□□□ 1.5
PCDH1-204ENST00000503492 MAPK13O15264 365 aa24.44■■□□□ 1.5
PCDH1-204ENST00000503492 PEX10O60683 326 aa24.44■■□□□ 1.5
PCDH1-204ENST00000503492 LRRN2O75325 713 aa24.44■■□□□ 1.5
PCDH1-204ENST00000503492 STAM2O75886 525 aa24.44■■□□□ 1.5
PCDH1-204ENST00000503492 GCLMP48507 274 aa24.44■■□□□ 1.5
PCDH1-204ENST00000503492 SMTNP53814 917 aa24.44■■□□□ 1.5
PCDH1-204ENST00000503492 ACTR2P61160 394 aa24.44■■□□□ 1.5
PCDH1-204ENST00000503492 DMP1Q13316 513 aaPredicted RBP24.44■■□□□ 1.5
PCDH1-204ENST00000503492 MS4A14Q96JA4 679 aa24.44■■□□□ 1.5
PCDH1-204ENST00000503492 SYT11Q9BT88 431 aa24.44■■□□□ 1.5
PCDH1-204ENST00000503492 ARID2Q68CP9 1835 aa24.44■■□□□ 1.5
PCDH1-204ENST00000503492 GOLGA8IPA6NC78 632 aa24.44■■□□□ 1.5
PCDH1-204ENST00000503492 GOLGA8JA6NMD2 632 aa24.44■■□□□ 1.5
PCDH1-204ENST00000503492 ZMYND10O75800 440 aa24.44■■□□□ 1.5
PCDH1-204ENST00000503492 DDNO94850 711 aaPredicted RBP24.44■■□□□ 1.5
PCDH1-204ENST00000503492 ADRB2P07550 413 aa24.44■■□□□ 1.5
PCDH1-204ENST00000503492 ADSSP30520 456 aa24.44■■□□□ 1.5
PCDH1-204ENST00000503492 ARHGAP44Q17R89 818 aa24.44■■□□□ 1.5
PCDH1-204ENST00000503492 ABHD15Q6UXT9 468 aa24.44■■□□□ 1.5
PCDH1-204ENST00000503492 MAP4K3Q8IVH8 894 aa24.44■■□□□ 1.5
PCDH1-204ENST00000503492 CNKSR2Q8WXI2 1034 aa24.44■■□□□ 1.5
PCDH1-204ENST00000503492 DAAM1Q9Y4D1 1078 aa24.44■■□□□ 1.5
PCDH1-204ENST00000503492 H2AFZP0C0S5 128 aa24.43■■□□□ 1.5
PCDH1-204ENST00000503492 MCM3P25205 808 aa24.43■■□□□ 1.5
PCDH1-204ENST00000503492 PAFAH1B1P43034 410 aa24.43■■□□□ 1.5
PCDH1-204ENST00000503492 GNPTABQ3T906 1256 aa24.43■■□□□ 1.5
PCDH1-204ENST00000503492 H2AFVQ71UI9 128 aa24.43■■□□□ 1.5
PCDH1-204ENST00000503492 KIFAP3Q92845 792 aa24.43■■□□□ 1.5
PCDH1-204ENST00000503492 MAF1Q9H063 256 aa24.43■■□□□ 1.5
PCDH1-204ENST00000503492 KMT5AQ9NQR1 393 aa24.43■■□□□ 1.5
PCDH1-204ENST00000503492 EXOC7Q9UPT5 735 aa24.43■■□□□ 1.5
PCDH1-204ENST00000503492 PFASO15067 1338 aa24.43■■□□□ 1.5
PCDH1-204ENST00000503492 DENND3A2RUS2 1198 aa24.43■■□□□ 1.5
PCDH1-204ENST00000503492 P4HA2O15460 535 aa24.43■■□□□ 1.5
PCDH1-204ENST00000503492 DKC1O60832 514 aaKnown RBP eCLIP24.43■■□□□ 1.5
PCDH1-204ENST00000503492 DNA2P51530 1060 aa24.43■■□□□ 1.5
PCDH1-204ENST00000503492 SP2Q02086 613 aa24.43■■□□□ 1.5
PCDH1-204ENST00000503492 EPC2Q52LR7 807 aa24.43■■□□□ 1.5
PCDH1-204ENST00000503492 GLYCTKQ8IVS8 523 aa24.43■■□□□ 1.5
PCDH1-204ENST00000503492 HVCN1Q96D96 273 aa24.43■■□□□ 1.5
PCDH1-204ENST00000503492 NTPCRQ9BSD7 190 aaKnown RBP24.43■■□□□ 1.5
PCDH1-204ENST00000503492 PDLIM7Q9NR12 457 aa24.43■■□□□ 1.5
PCDH1-204ENST00000503492 PTPRFP10586 1907 aa24.42■■□□□ 1.5
PCDH1-204ENST00000503492 N4BP1O75113 896 aaKnown RBP24.42■■□□□ 1.5
PCDH1-204ENST00000503492 MATR3P43243 847 aaKnown RBP eCLIP24.42■■□□□ 1.5
PCDH1-204ENST00000503492 CNTN2Q02246 1040 aa24.42■■□□□ 1.5
PCDH1-204ENST00000503492 FSTL1Q12841 308 aa24.42■■□□□ 1.5
PCDH1-204ENST00000503492 SPIRE2Q8WWL2 714 aa24.42■■□□□ 1.5
PCDH1-204ENST00000503492 LRRC1Q9BTT6 524 aa24.42■■□□□ 1.5
PCDH1-204ENST00000503492 XPNPEP1Q9NQW7 623 aa24.42■■□□□ 1.5
PCDH1-204ENST00000503492 INTUQ9ULD6 942 aa24.42■■□□□ 1.5
PCDH1-204ENST00000503492 SBF1O95248 1867 aa24.42■■□□□ 1.5
PCDH1-204ENST00000503492 FOXN3O00409 490 aaPredicted RBP24.42■■□□□ 1.5
PCDH1-204ENST00000503492 RFX1P22670 979 aa24.42■■□□□ 1.5
PCDH1-204ENST00000503492 NOP2P46087 812 aaKnown RBP24.42■■□□□ 1.5
PCDH1-204ENST00000503492 PRKCEQ02156 737 aa24.42■■□□□ 1.5
PCDH1-204ENST00000503492 CASP8Q14790 479 aa24.42■■□□□ 1.5
PCDH1-204ENST00000503492 CBWD2Q8IUF1 395 aa24.42■■□□□ 1.5
PCDH1-204ENST00000503492 ARHGEF19Q8IW93 802 aa24.42■■□□□ 1.5
PCDH1-204ENST00000503492 LRRC57Q8N9N7 239 aa24.42■■□□□ 1.5
PCDH1-204ENST00000503492 CHST13Q8NET6 341 aa24.42■■□□□ 1.5
PCDH1-204ENST00000503492 SEPT9Q9UHD8 586 aaPredicted RBP24.42■■□□□ 1.5
PCDH1-204ENST00000503492 OAS2P29728 719 aaKnown RBP24.41■■□□□ 1.5
PCDH1-204ENST00000503492 CNGA1P29973 690 aa24.41■■□□□ 1.5
PCDH1-204ENST00000503492 CFAP221Q4G0U5 840 aa24.41■■□□□ 1.5
PCDH1-204ENST00000503492 LBX2Q6XYB7 198 aa24.41■■□□□ 1.5
PCDH1-204ENST00000503492 SAAL1Q96ER3 474 aa24.41■■□□□ 1.5
PCDH1-204ENST00000503492 GOLPH3Q9H4A6 298 aa24.41■■□□□ 1.5
PCDH1-204ENST00000503492 C17orf75Q9HAS0 396 aa24.41■■□□□ 1.5
PCDH1-204ENST00000503492 UBE2TQ9NPD8 197 aaPredicted RBP24.41■■□□□ 1.5
PCDH1-204ENST00000503492 RNF14Q9UBS8 474 aa24.41■■□□□ 1.5
PCDH1-204ENST00000503492 ADGRA3Q8IWK6 1321 aa24.41■■□□□ 1.5
PCDH1-204ENST00000503492 MCCD1P59942 119 aaPredicted RBP24.4■■□□□ 1.5
PCDH1-204ENST00000503492 CETN1Q12798 172 aa24.4■■□□□ 1.5
PCDH1-204ENST00000503492 TERF2Q15554 542 aa24.4■■□□□ 1.5
PCDH1-204ENST00000503492 TPCN2Q8NHX9 752 aa24.4■■□□□ 1.5
PCDH1-204ENST00000503492 HDAC7Q8WUI4 952 aa24.4■■□□□ 1.5
PCDH1-204ENST00000503492 TMEM117Q9H0C3 514 aa24.4■■□□□ 1.5
PCDH1-204ENST00000503492 CYP26B1Q9NR63 512 aa24.4■■□□□ 1.5
PCDH1-204ENST00000503492 BTBD7Q9P203 1132 aa24.4■■□□□ 1.5
PCDH1-204ENST00000503492 DGAT1O75907 488 aa24.4■■□□□ 1.5
PCDH1-204ENST00000503492 GALCP54803 685 aa24.4■■□□□ 1.5
PCDH1-204ENST00000503492 KIF22Q14807 665 aa24.4■■□□□ 1.5
PCDH1-204ENST00000503492 STXBP2Q15833 593 aa24.4■■□□□ 1.5
PCDH1-204ENST00000503492 IFI16Q16666 785 aaKnown RBP24.4■■□□□ 1.5
PCDH1-204ENST00000503492 MIS18BP1Q6P0N0 1132 aa24.4■■□□□ 1.5
PCDH1-204ENST00000503492 SLC39A4Q6P5W5 647 aa24.4■■□□□ 1.5
PCDH1-204ENST00000503492 DNERQ8NFT8 737 aa24.4■■□□□ 1.5
PCDH1-204ENST00000503492 UBE2Q2Q8WVN8 375 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms