RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.58□□□□□ -1.2
TOPBP1-203ENST00000503464 ITIH6Q6UXX5 1313 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 N4BP3O15049 544 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 CETN3O15182 167 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 SLC16A3O15427 465 aaKnown RBP7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 CALUO43852 315 aaPredicted RBP7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 ADCY3O60266 1144 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 ADAMTS4O75173 837 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 DUSP11O75319 330 aaKnown RBP7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 PIGRP01833 764 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 GYPCP04921 128 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 HOXC8P31273 242 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 MTIF2P46199 727 aaKnown RBP7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 CYP2J2P51589 502 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 GJA9P57773 515 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 MCCD1P59942 119 aaPredicted RBP7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 IGBP1P78318 339 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 ADAM17P78536 824 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 PURAQ00577 322 aaKnown RBP7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 LAMTOR4Q0VGL1 99 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 MFSD10Q14728 455 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 GRIK4Q16099 956 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 FSCN1Q16658 493 aaKnown RBP7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 MAN2A1Q16706 1144 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 VWA3BQ502W6 1294 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 HS1BP3Q53T59 392 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 IER5Q5VY09 327 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 MFSD14CQ5VZR4 134 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 SPECC1LQ69YQ0 1117 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 DPY19L2P1Q6NXN4 242 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 STXBP4Q6ZWJ1 553 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 TMEM139Q8IV31 216 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 SLC9A9Q8IVB4 645 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 FAM114A1Q8IWE2 563 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 DRC7Q8IY82 874 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 SLC17A8Q8NDX2 589 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 PLEKHO2Q8TD55 490 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 LMBR1Q8WVP7 490 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 MS4A3Q96HJ5 214 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 CTAGE1Q96RT6 745 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 TTYH3Q9C0H2 523 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 TMEM206Q9H813 350 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 SUGCTQ9HAC7 445 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 IMPACTQ9P2X3 320 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 TSKSQ9UJT2 592 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 SIK3Q9Y2K2 1263 aa7.57□□□□□ -1.2
TOPBP1-203ENST00000503464 PHLPP2Q6ZVD8 1323 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 RALGAPA2Q2PPJ7 1873 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 A0A1W2PQC6 194 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 MBLAC1A4D2B0 266 aaPredicted RBP7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 LRRIQ4A6NIV6 560 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 ABLIM1O14639 778 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 EPHB6O15197 1021 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 SEPT4O43236 478 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 GAS2O43903 313 aaKnown RBP7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 MSCO60682 206 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 FKTNO75072 461 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 FGFR1OPO95684 399 aaKnown RBP7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 PGK1P00558 417 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 PTMAP06454 111 aaKnown RBP7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 ADRB2P07550 413 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 IQCF3P0C7M6 154 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 SMIM10L2AP0DMW4 78 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 SMIM10L2BP0DMW5 78 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 PRKCSHP14314 528 aaPredicted RBP7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 KLRC1P26715 233 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 PSEN2P49810 448 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 CPT1AP50416 773 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 FXR1P51114 621 aaKnown RBP eCLIP7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 SMTNP53814 917 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 WNT7BP56706 349 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 CCZ1BP86790 482 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 CCZ1P86791 482 aaPredicted RBP7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 UBXN1Q04323 297 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 KCNMA1Q12791 1236 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 PPFIA1Q13136 1202 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 KIF22Q14807 665 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 KIAA0753Q2KHM9 967 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 CCDC40Q4G0X9 1142 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 C1orf220Q5T0J3 134 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 CCSAPQ6IQ19 270 aaPredicted RBP7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 EFCAB12Q6NXP0 572 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 MTHFD1LQ6UB35 978 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 RUFY4Q6ZNE9 571 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 HS2ST1Q7LGA3 356 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 FRMD5Q7Z6J6 570 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 CREBRFQ8IUR6 639 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 SYCP3Q8IZU3 236 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 TC2NQ8N9U0 490 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 PSPC1Q8WXF1 523 aaKnown RBP7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 SLC35C1Q96A29 364 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 ZNF668Q96K58 619 aaPredicted RBP7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 IFT74Q96LB3 600 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 ERGIC2Q96RQ1 377 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 MKNK1Q9BUB5 465 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 NOC4LQ9BVI4 516 aaKnown RBP7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 AP5M1Q9H0R1 490 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 NDST4Q9H3R1 872 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 PCIF1Q9H4Z3 704 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 MINDY3Q9H8M7 445 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms