RNA–Protein interactions for RNA: ENST00000503121.5

SYNE4-206, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-206ENST00000503121 ECM1Q16610 540 aa13.35□□□□□ -0.27
SYNE4-206ENST00000503121 TCEAL5Q5H9L2 206 aa13.35□□□□□ -0.27
SYNE4-206ENST00000503121 PADI6Q6TGC4 694 aa13.35□□□□□ -0.27
SYNE4-206ENST00000503121 ZNF598Q86UK7 904 aaKnown RBP13.35□□□□□ -0.27
SYNE4-206ENST00000503121 THNSL1Q8IYQ7 743 aa13.35□□□□□ -0.27
SYNE4-206ENST00000503121 LRRC43Q8N309 656 aa13.35□□□□□ -0.27
SYNE4-206ENST00000503121 IGSF22Q8N9C0 903 aa13.35□□□□□ -0.27
SYNE4-206ENST00000503121 HELQQ8TDG4 1101 aa13.35□□□□□ -0.27
SYNE4-206ENST00000503121 TRAIPQ9BWF2 469 aa13.35□□□□□ -0.27
SYNE4-206ENST00000503121 GPRC5CQ9NQ84 441 aa13.35□□□□□ -0.27
SYNE4-206ENST00000503121 HCSTQ9UBK5 93 aa13.35□□□□□ -0.27
SYNE4-206ENST00000503121 NLRC5Q86WI3 1866 aa13.35□□□□□ -0.27
SYNE4-206ENST00000503121 RALGAPA2Q2PPJ7 1873 aa13.34□□□□□ -0.27
SYNE4-206ENST00000503121 LRRIQ4A6NIV6 560 aa13.34□□□□□ -0.27
SYNE4-206ENST00000503121 PP2D1A8MPX8 630 aa13.34□□□□□ -0.27
SYNE4-206ENST00000503121 ATF7P17544 494 aaPredicted RBP13.34□□□□□ -0.27
SYNE4-206ENST00000503121 LAG3P18627 525 aa13.34□□□□□ -0.27
SYNE4-206ENST00000503121 CYP11B2P19099 503 aa13.34□□□□□ -0.27
SYNE4-206ENST00000503121 CDC25AP30304 524 aa13.34□□□□□ -0.27
SYNE4-206ENST00000503121 HOXA11P31270 313 aaPredicted RBP13.34□□□□□ -0.27
SYNE4-206ENST00000503121 ATP2C1P98194 919 aaPredicted RBP13.34□□□□□ -0.27
SYNE4-206ENST00000503121 POU5F1BQ06416 359 aa13.34□□□□□ -0.27
SYNE4-206ENST00000503121 PCBP1Q15365 356 aaKnown RBP eCLIP13.34□□□□□ -0.27
SYNE4-206ENST00000503121 ZRSR1Q15695 479 aaKnown RBP13.34□□□□□ -0.27
SYNE4-206ENST00000503121 IL17AQ16552 155 aa13.34□□□□□ -0.27
SYNE4-206ENST00000503121 CLLU1OSQ5K130 101 aa13.34□□□□□ -0.27
SYNE4-206ENST00000503121 EP400NLQ6ZTU2 488 aa13.34□□□□□ -0.27
SYNE4-206ENST00000503121 BRAPQ7Z569 592 aa13.34□□□□□ -0.27
SYNE4-206ENST00000503121 COLGALT1Q8NBJ5 622 aa13.34□□□□□ -0.27
SYNE4-206ENST00000503121 SPPL3Q8TCT6 385 aa13.34□□□□□ -0.27
SYNE4-206ENST00000503121 POF1BQ8WVV4 589 aa13.34□□□□□ -0.27
SYNE4-206ENST00000503121 LPPQ93052 612 aa13.34□□□□□ -0.27
SYNE4-206ENST00000503121 PGBD4Q96DM1 585 aa13.34□□□□□ -0.27
SYNE4-206ENST00000503121 BHMT2Q9H2M3 363 aa13.34□□□□□ -0.27
SYNE4-206ENST00000503121 CWH43Q9H720 699 aa13.34□□□□□ -0.27
SYNE4-206ENST00000503121 FOXD4L1Q9NU39 408 aa13.34□□□□□ -0.27
SYNE4-206ENST00000503121 DDX19AQ9NUU7 478 aaKnown RBP13.34□□□□□ -0.27
SYNE4-206ENST00000503121 RNF19AQ9NV58 838 aa13.34□□□□□ -0.27
SYNE4-206ENST00000503121 DNM3Q9UQ16 869 aa13.34□□□□□ -0.27
SYNE4-206ENST00000503121 PCDHB2Q9Y5E7 798 aa13.34□□□□□ -0.27
SYNE4-206ENST00000503121 TTC28Q96AY4 2481 aa13.34□□□□□ -0.27
SYNE4-206ENST00000503121 BRWD1Q9NSI6 2320 aa13.34□□□□□ -0.27
SYNE4-206ENST00000503121 VCANP13611 3396 aa13.34□□□□□ -0.27
SYNE4-206ENST00000503121 VWA3AA6NCI4 1184 aa13.33□□□□□ -0.28
SYNE4-206ENST00000503121 K7ELQ4 463 aaPredicted RBP13.33□□□□□ -0.28
SYNE4-206ENST00000503121 TSPAN1O60635 241 aa13.33□□□□□ -0.28
SYNE4-206ENST00000503121 ZNF623O75123 536 aa13.33□□□□□ -0.28
SYNE4-206ENST00000503121 FGF18O76093 207 aa13.33□□□□□ -0.28
SYNE4-206ENST00000503121 AXLP30530 894 aa13.33□□□□□ -0.28
SYNE4-206ENST00000503121 MBTD1Q05BQ5 628 aa13.33□□□□□ -0.28
SYNE4-206ENST00000503121 CSPP1Q1MSJ5 1256 aa13.33□□□□□ -0.28
SYNE4-206ENST00000503121 GLB1LQ6UWU2 654 aa13.33□□□□□ -0.28
SYNE4-206ENST00000503121 LRRC55Q6ZSA7 311 aa13.33□□□□□ -0.28
SYNE4-206ENST00000503121 MICAL1Q8TDZ2 1067 aa13.33□□□□□ -0.28
SYNE4-206ENST00000503121 ZNF558Q96NG5 402 aa13.33□□□□□ -0.28
SYNE4-206ENST00000503121 MRPL9Q9BYD2 267 aaKnown RBP13.33□□□□□ -0.28
SYNE4-206ENST00000503121 INPP5FQ9Y2H2 1132 aa13.33□□□□□ -0.28
SYNE4-206ENST00000503121 FNDC1Q4ZHG4 1894 aaPredicted RBP13.32□□□□□ -0.28
SYNE4-206ENST00000503121 E9PMD0 336 aa13.32□□□□□ -0.28
SYNE4-206ENST00000503121 KCNA5P22460 613 aa13.32□□□□□ -0.28
SYNE4-206ENST00000503121 DNAJB1P25685 340 aa13.32□□□□□ -0.28
SYNE4-206ENST00000503121 KCNQ1P51787 676 aa13.32□□□□□ -0.28
SYNE4-206ENST00000503121 RNASELQ05823 741 aaKnown RBP13.32□□□□□ -0.28
SYNE4-206ENST00000503121 CAMK1Q14012 370 aa13.32□□□□□ -0.28
SYNE4-206ENST00000503121 ARL6IP4Q66PJ3 421 aaKnown RBP13.32□□□□□ -0.28
SYNE4-206ENST00000503121 NOTUMQ6P988 496 aa13.32□□□□□ -0.28
SYNE4-206ENST00000503121 KCNT2Q6UVM3 1135 aa13.32□□□□□ -0.28
SYNE4-206ENST00000503121 IFNLR1Q8IU57 520 aaPredicted RBP13.32□□□□□ -0.28
SYNE4-206ENST00000503121 ZBTB8OSQ8IWT0 167 aa13.32□□□□□ -0.28
SYNE4-206ENST00000503121 PPP2R3CQ969Q6 453 aa13.32□□□□□ -0.28
SYNE4-206ENST00000503121 INTS4Q96HW7 963 aaKnown RBP13.32□□□□□ -0.28
SYNE4-206ENST00000503121 CPB2Q96IY4 423 aa13.32□□□□□ -0.28
SYNE4-206ENST00000503121 NFKBIZQ9BYH8 718 aa13.32□□□□□ -0.28
SYNE4-206ENST00000503121 IGFLR1Q9H665 355 aa13.32□□□□□ -0.28
SYNE4-206ENST00000503121 UBE2ZQ9H832 354 aaPredicted RBP13.32□□□□□ -0.28
SYNE4-206ENST00000503121 POLD4Q9HCU8 107 aa13.32□□□□□ -0.28
SYNE4-206ENST00000503121 PUF60Q9UHX1 559 aaKnown RBP13.32□□□□□ -0.28
SYNE4-206ENST00000503121 ARID2Q68CP9 1835 aa13.32□□□□□ -0.28
SYNE4-206ENST00000503121 SPTBN5Q9NRC6 3674 aaKnown RBP13.32□□□□□ -0.28
SYNE4-206ENST00000503121 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.31□□□□□ -0.28
SYNE4-206ENST00000503121 MEIS3P2A8K0S8 358 aa13.31□□□□□ -0.28
SYNE4-206ENST00000503121 NCK2O43639 380 aa13.31□□□□□ -0.28
SYNE4-206ENST00000503121 OFD1O75665 1012 aa13.31□□□□□ -0.28
SYNE4-206ENST00000503121 EYA4O95677 639 aa13.31□□□□□ -0.28
SYNE4-206ENST00000503121 BMP15O95972 392 aa13.31□□□□□ -0.28
SYNE4-206ENST00000503121 LIG1P18858 919 aa13.31□□□□□ -0.28
SYNE4-206ENST00000503121 SYT1P21579 422 aa13.31□□□□□ -0.28
SYNE4-206ENST00000503121 IRS1P35568 1242 aa13.31□□□□□ -0.28
SYNE4-206ENST00000503121 PPM1AP35813 382 aa13.31□□□□□ -0.28
SYNE4-206ENST00000503121 PBX3P40426 434 aa13.31□□□□□ -0.28
SYNE4-206ENST00000503121 ALDH7A1P49419 539 aaKnown RBP13.31□□□□□ -0.28
SYNE4-206ENST00000503121 KRT17Q04695 432 aa13.31□□□□□ -0.28
SYNE4-206ENST00000503121 UBE3AQ05086 875 aa13.31□□□□□ -0.28
SYNE4-206ENST00000503121 PPP2R5AQ15172 486 aa13.31□□□□□ -0.28
SYNE4-206ENST00000503121 TMEM132AQ24JP5 1023 aa13.31□□□□□ -0.28
SYNE4-206ENST00000503121 NOMO2Q5JPE7 1267 aa13.31□□□□□ -0.28
SYNE4-206ENST00000503121 UBXN11Q5T124 520 aa13.31□□□□□ -0.28
SYNE4-206ENST00000503121 MRPL10Q7Z7H8 261 aaKnown RBP13.31□□□□□ -0.28
SYNE4-206ENST00000503121 CNNM3Q8NE01 707 aa13.31□□□□□ -0.28
SYNE4-206ENST00000503121 RSPH1Q8WYR4 309 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms