RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 CARNS1A5YM72 827 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 HOXA2O43364 376 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 EOMESO95936 686 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 ZSCAN20P17040 1043 aaPredicted RBP11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 DNAJB2P25686 324 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 DEFB103AP81534 67 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 CEBPZQ03701 1054 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 MBTD1Q05BQ5 628 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 NFX1Q12986 1120 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 E2F4Q16254 413 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 RRAGBQ5VZM2 374 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 RESP18Q5W5W9 173 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 RTN4RL1Q86UN2 441 aaPredicted RBP11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 ZBTB8OSQ8IWT0 167 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 DAW1Q8N136 415 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 CNNM3Q8NE01 707 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 LEO1Q8WVC0 666 aaPredicted RBP11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 ZNF689Q96CS4 500 aaPredicted RBP11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 IFT74Q96LB3 600 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 SCLT1Q96NL6 688 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 CLIC6Q96NY7 704 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 LRRC27Q9C0I9 530 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 TNMDQ9H2S6 317 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 TMEM134Q9H6X4 195 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 TMEM161AQ9NX61 479 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 PCDH10Q9P2E7 1040 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 ARHGAP28Q9P2N2 729 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 USP25Q9UHP3 1055 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 MSRAQ9UJ68 235 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 PCDHA7Q9UN72 937 aa11.87□□□□□ -0.51
UBE2D3-212ENST00000502563 DENND3A2RUS2 1198 aa11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 SOX1O00570 391 aaPredicted RBP11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 MAPTP10636 758 aaKnown RBP11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 PLS3P13797 630 aa11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 CMA1P23946 247 aa11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 NCBP1Q09161 790 aaKnown RBP11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 DMP1Q13316 513 aaPredicted RBP11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 AMHR2Q16671 573 aa11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 ARSHQ5FYA8 562 aa11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 FAM102BQ5T8I3 360 aa11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 SHC4Q6S5L8 630 aa11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.86□□□□□ -0.514e-6■■■□□ 19.2
UBE2D3-212ENST00000502563 USP49Q70CQ1 688 aa11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 KSR1Q8IVT5 923 aa11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 MYOCDQ8IZQ8 938 aa11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 IQUBQ8NA54 791 aa11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 LRRC15Q8TF66 581 aa11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 SPATA32Q96LK8 384 aa11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 SAMD11Q96NU1 681 aa11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 ADAM2Q99965 735 aa11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 RUSC1Q9BVN2 902 aa11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 CCDC113Q9H0I3 377 aa11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 ST6GALNAC4Q9H4F1 302 aa11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 KBTBD4Q9NVX7 518 aa11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 SEL1LQ9UBV2 794 aa11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 RWDD3Q9Y3V2 267 aa11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 CNTNAP2Q9UHC6 1331 aa11.86□□□□□ -0.51
UBE2D3-212ENST00000502563 A0A1B0GUA9 196 aa11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 FRMD3A2A2Y4 597 aa11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 ACKR2O00590 384 aa11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 INPPL1O15357 1258 aa11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 TLL1O43897 1013 aa11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 MGEA5O60502 916 aa11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 HIP1RO75146 1068 aa11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 DGKIO75912 1065 aa11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 ERLIN2O94905 339 aa11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 MYL1P05976 194 aa11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 SRGAP2CP0DJJ0 459 aa11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 HOXA11P31270 313 aaPredicted RBP11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 NPTX2P47972 431 aa11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 ME1P48163 572 aa11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 SMTNP53814 917 aa11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 AMPD3Q01432 767 aa11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 MAPK6Q16659 721 aa11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 NOTUMQ6P988 496 aa11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 SV2BQ7L1I2 683 aa11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 CATSPER4Q7RTX7 472 aa11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 ZNF598Q86UK7 904 aaKnown RBP11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 CMTR2Q8IYT2 770 aaKnown RBP11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 RASSF8Q8NHQ8 419 aa11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 CLP1Q92989 425 aaKnown RBP11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 TIFAQ96CG3 184 aa11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 MINDY3Q9H8M7 445 aa11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 GPRC5CQ9NQ84 441 aa11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 FAM13BQ9NYF5 915 aa11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 HPSEQ9Y251 543 aa11.85□□□□□ -0.51
UBE2D3-212ENST00000502563 A0A087WWV3 80 aa11.84□□□□□ -0.51
UBE2D3-212ENST00000502563 SPDYE4A6NLX3 237 aa11.84□□□□□ -0.51
UBE2D3-212ENST00000502563 TSPAN1O60635 241 aa11.84□□□□□ -0.51
UBE2D3-212ENST00000502563 STAT6P42226 847 aa11.84□□□□□ -0.51
UBE2D3-212ENST00000502563 NCKAP1LP55160 1127 aa11.84□□□□□ -0.51
UBE2D3-212ENST00000502563 GIT2Q14161 759 aa11.84□□□□□ -0.51
UBE2D3-212ENST00000502563 SPECC1Q5M775 1068 aa11.84□□□□□ -0.51
UBE2D3-212ENST00000502563 ZNF697Q5TEC3 545 aa11.84□□□□□ -0.51
UBE2D3-212ENST00000502563 FOXD4L5Q5VV16 416 aaPredicted RBP11.84□□□□□ -0.51
UBE2D3-212ENST00000502563 MRPL10Q7Z7H8 261 aaKnown RBP11.84□□□□□ -0.51
UBE2D3-212ENST00000502563 FOXD4L4Q8WXT5 416 aaPredicted RBP11.84□□□□□ -0.51
UBE2D3-212ENST00000502563 BSNDQ8WZ55 320 aa11.84□□□□□ -0.51
UBE2D3-212ENST00000502563 REEP2Q9BRK0 252 aa11.84□□□□□ -0.51
UBE2D3-212ENST00000502563 SLC28A3Q9HAS3 691 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms