RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 BUB1BO60566 1050 aaPredicted RBP17.96■□□□□ 0.47
VCAN-204ENST00000502527 KCNA3P22001 575 aa17.96■□□□□ 0.47
VCAN-204ENST00000502527 YWHABP31946 246 aaKnown RBP17.96■□□□□ 0.47
VCAN-204ENST00000502527 EN1Q05925 392 aaPredicted RBP17.96■□□□□ 0.47
VCAN-204ENST00000502527 RASA3Q14644 834 aa17.96■□□□□ 0.47
VCAN-204ENST00000502527 MYOZ2Q9NPC6 264 aa17.96■□□□□ 0.47
VCAN-204ENST00000502527 UBE2TQ9NPD8 197 aaPredicted RBP17.96■□□□□ 0.47
VCAN-204ENST00000502527 OSGEPQ9NPF4 335 aa17.96■□□□□ 0.47
VCAN-204ENST00000502527 GINM1Q9NU53 330 aa17.96■□□□□ 0.47
VCAN-204ENST00000502527 TTC7AQ9ULT0 858 aaPredicted RBP17.96■□□□□ 0.47
VCAN-204ENST00000502527 ANKRD62A6NC57 917 aa17.95■□□□□ 0.46
VCAN-204ENST00000502527 ABCB4P21439 1286 aa17.95■□□□□ 0.46
VCAN-204ENST00000502527 ERVK-9P63128 1117 aa17.95■□□□□ 0.46
VCAN-204ENST00000502527 GTF2BQ00403 316 aa17.95■□□□□ 0.46
VCAN-204ENST00000502527 HAUS6Q7Z4H7 955 aa17.95■□□□□ 0.46
VCAN-204ENST00000502527 C4orf19Q8IY42 314 aa17.95■□□□□ 0.46
VCAN-204ENST00000502527 SLC17A8Q8NDX2 589 aa17.95■□□□□ 0.46
VCAN-204ENST00000502527 AGPAT1Q99943 283 aa17.95■□□□□ 0.46
VCAN-204ENST00000502527 SLITRK6Q9H5Y7 841 aa17.95■□□□□ 0.46
VCAN-204ENST00000502527 HOMER2Q9NSB8 354 aa17.95■□□□□ 0.46
VCAN-204ENST00000502527 SEPT11Q9NVA2 429 aaKnown RBP17.95■□□□□ 0.46
VCAN-204ENST00000502527 HSPBP1Q9NZL4 362 aa17.95■□□□□ 0.46
VCAN-204ENST00000502527 HSPA9P38646 679 aaKnown RBP17.95■□□□□ 0.46
VCAN-204ENST00000502527 DLG4P78352 724 aa17.95■□□□□ 0.46
VCAN-204ENST00000502527 PPATQ06203 517 aa17.95■□□□□ 0.46
VCAN-204ENST00000502527 HLTFQ14527 1009 aaKnown RBP eCLIP17.95■□□□□ 0.46
VCAN-204ENST00000502527 TRADDQ15628 312 aa17.95■□□□□ 0.46
VCAN-204ENST00000502527 TTMPQ5BVD1 217 aa17.95■□□□□ 0.46
VCAN-204ENST00000502527 CD302Q8IX05 232 aa17.95■□□□□ 0.46
VCAN-204ENST00000502527 CCDC26Q8TAB7 109 aa17.95■□□□□ 0.46
VCAN-204ENST00000502527 ARL8AQ96BM9 186 aa17.95■□□□□ 0.46
VCAN-204ENST00000502527 TAAR1Q96RJ0 339 aa17.95■□□□□ 0.46
VCAN-204ENST00000502527 CBWD1Q9BRT8 395 aa17.95■□□□□ 0.46
VCAN-204ENST00000502527 CAPS2Q9BXY5 557 aa17.95■□□□□ 0.46
VCAN-204ENST00000502527 CTDP1Q9Y5B0 961 aaPredicted RBP17.95■□□□□ 0.46
VCAN-204ENST00000502527 A6NNZ2 444 aa17.94■□□□□ 0.46
VCAN-204ENST00000502527 TULP2O00295 520 aa17.94■□□□□ 0.46
VCAN-204ENST00000502527 LRRN2O75325 713 aa17.94■□□□□ 0.46
VCAN-204ENST00000502527 PPFIA4O75335 1185 aa17.94■□□□□ 0.46
VCAN-204ENST00000502527 EIF2AK2P19525 551 aaKnown RBP17.94■□□□□ 0.46
VCAN-204ENST00000502527 JAK3P52333 1124 aa17.94■□□□□ 0.46
VCAN-204ENST00000502527 PSMC5P62195 406 aa17.94■□□□□ 0.46
VCAN-204ENST00000502527 RPS6P62753 249 aaKnown RBP17.94■□□□□ 0.46
VCAN-204ENST00000502527 PPP3CAQ08209 521 aa17.94■□□□□ 0.46
VCAN-204ENST00000502527 PGM5Q15124 567 aa17.94■□□□□ 0.46
VCAN-204ENST00000502527 TUBB8Q3ZCM7 444 aa17.94■□□□□ 0.46
VCAN-204ENST00000502527 EPC2Q52LR7 807 aa17.94■□□□□ 0.46
VCAN-204ENST00000502527 MAATS1Q7Z4T9 603 aa17.94■□□□□ 0.46
VCAN-204ENST00000502527 DDX47Q9H0S4 455 aaKnown RBP17.94■□□□□ 0.46
VCAN-204ENST00000502527 TCEAL9Q9UHQ7 104 aa17.94■□□□□ 0.46
VCAN-204ENST00000502527 TISP43B9A030 160 aa17.94■□□□□ 0.46
VCAN-204ENST00000502527 BHMG1C9JSJ3 638 aaPredicted RBP17.94■□□□□ 0.46
VCAN-204ENST00000502527 PMM2O15305 246 aa17.94■□□□□ 0.46
VCAN-204ENST00000502527 SFNP31947 248 aa17.94■□□□□ 0.46
VCAN-204ENST00000502527 IRAK1P51617 712 aa17.94■□□□□ 0.46
VCAN-204ENST00000502527 TNFAIP1Q13829 316 aa17.94■□□□□ 0.46
VCAN-204ENST00000502527 CIAPIN1Q6FI81 312 aa17.94■□□□□ 0.46
VCAN-204ENST00000502527 THAP2Q9H0W7 228 aa17.94■□□□□ 0.46
VCAN-204ENST00000502527 PPP1R9AQ9ULJ8 1098 aa17.94■□□□□ 0.46
VCAN-204ENST00000502527 ASTN2O75129 1339 aaPredicted RBP17.93■□□□□ 0.46
VCAN-204ENST00000502527 IGSF9BQ9UPX0 1349 aa17.93■□□□□ 0.46
VCAN-204ENST00000502527 ZNF233A6NK53 670 aa17.93■□□□□ 0.46
VCAN-204ENST00000502527 WDR64B1ANS9 1081 aa17.93■□□□□ 0.46
VCAN-204ENST00000502527 ZBED4O75132 1171 aa17.93■□□□□ 0.46
VCAN-204ENST00000502527 GCLMP48507 274 aa17.93■□□□□ 0.46
VCAN-204ENST00000502527 SPP2Q13103 211 aa17.93■□□□□ 0.46
VCAN-204ENST00000502527 RHOT2Q8IXI1 618 aa17.93■□□□□ 0.46
VCAN-204ENST00000502527 PIK3R5Q8WYR1 880 aa17.93■□□□□ 0.46
VCAN-204ENST00000502527 RMDN3Q96TC7 470 aa17.93■□□□□ 0.46
VCAN-204ENST00000502527 NAP1L3Q99457 506 aaPredicted RBP17.93■□□□□ 0.46
VCAN-204ENST00000502527 ANKEF1Q9NU02 776 aa17.93■□□□□ 0.46
VCAN-204ENST00000502527 TAS2R14Q9NYV8 317 aa17.93■□□□□ 0.46
VCAN-204ENST00000502527 EXOC7Q9UPT5 735 aa17.93■□□□□ 0.46
VCAN-204ENST00000502527 BACH1O14867 736 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 SLC16A4O15374 487 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 CTNND1O60716 968 aaKnown RBP17.92■□□□□ 0.46
VCAN-204ENST00000502527 KRT14P02533 472 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 MYCLP12524 364 aaPredicted RBP17.92■□□□□ 0.46
VCAN-204ENST00000502527 HADHBP55084 474 aaKnown RBP17.92■□□□□ 0.46
VCAN-204ENST00000502527 NCKAP1LP55160 1127 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 PEX3P56589 373 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 SKOR1P84550 965 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 KRT76Q01546 638 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 CLUL1Q15846 466 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 C1orf220Q5T0J3 134 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 FOXR1Q6PIV2 292 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 ARHGEF19Q8IW93 802 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 C1orf131Q8NDD1 294 aaKnown RBP17.92■□□□□ 0.46
VCAN-204ENST00000502527 LRRC45Q96CN5 670 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 ARHGEF26Q96DR7 871 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 TEPSINQ96N21 525 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 CARD9Q9H257 536 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 USP20Q9Y2K6 914 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 MYH11P35749 1972 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 DDX3YO15523 660 aaKnown RBP17.92■□□□□ 0.46
VCAN-204ENST00000502527 FDX1P10109 184 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 ITGA4P13612 1032 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 ECHS1P30084 290 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 PPP2R5EQ16537 467 aa17.92■□□□□ 0.46
VCAN-204ENST00000502527 UGCGQ16739 394 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms