RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 LZTS1Q9Y250 596 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 FAM205CA6NFA0 338 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 SMIM23A6NLE4 172 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 SIGLEC16A6NMB1 481 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 POLRMTO00411 1230 aaKnown RBP6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 CTNND1O60716 968 aaKnown RBP6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 BPNT1O95861 308 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 CREB1P16220 341 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 NFKBIAP25963 317 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 PTDSS1P48651 473 aaKnown RBP6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 NEK3P51956 506 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 VAV2P52735 878 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 GRM1Q13255 1194 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 MTMR3Q13615 1198 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 CUL4BQ13620 913 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 LRRC14Q15048 493 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 Q3C1V9 767 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 C16orf87Q6PH81 154 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 LRRC47Q8N1G4 583 aaKnown RBP6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 PLIN2Q99541 437 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 MAP3K14Q99558 947 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 GOLPH3Q9H4A6 298 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 GPCPD1Q9NPB8 672 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 SNX12Q9UMY4 172 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 FRMPD2Q68DX3 1309 aaPredicted RBP6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 F8VZ95 297 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 TPBGLP0DKB5 382 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 GHRP10912 638 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 GRIA2P42262 883 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 PEX5P50542 639 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 GALK1P51570 392 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 CD300CQ08708 224 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 ALX1Q15699 326 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 ODF2Q5BJF6 829 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 RESP18Q5W5W9 173 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 PDXDC1Q6P996 788 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 NANOGNBQ7Z5D8 188 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 PNMA1Q8ND90 353 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 KRT12Q99456 494 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 PRMT1Q99873 361 aaKnown RBP6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 ATP8A2Q9NTI2 1148 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 LIMD1Q9UGP4 676 aa6.23□□□□□ -1.41
SOX2-OT-218ENST00000498731 SPTLC1O15269 473 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 BUB1O43683 1085 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 RAD17O75943 681 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 TUBBP07437 444 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 RBP3P10745 1247 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 CHN1P15882 459 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 ATP6V1C1P21283 382 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 KIF5BP33176 963 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 MCM7P33993 719 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 RXRGP48443 463 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 CACNA2D1P54289 1103 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 OXCT1P55809 520 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 ERVK-9P63128 1117 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 IFI35P80217 286 aaPredicted RBP6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 PRPF4BQ13523 1007 aaKnown RBP6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 SLC39A14Q15043 492 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 POSTNQ15063 836 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 CCDC38Q502W7 563 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 EMBQ6PCB8 327 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 RFWD3Q6PCD5 774 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 PIK3AP1Q6ZUJ8 805 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 PIGWQ7Z7B1 504 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 FAM114A1Q8IWE2 563 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 KCNG4Q8TDN1 519 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 ATXN2LQ8WWM7 1075 aaKnown RBP6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 FERMT2Q96AC1 680 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 EYA3Q99504 573 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 CARD9Q9H257 536 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 GDF3Q9NR23 364 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 PCDHAC2Q9Y5I4 1007 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 UBR2Q8IWV8 1755 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 TRIM49BA6NDI0 452 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 RAD51CO43502 376 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 DEXIO95424 95 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 LIFRP42702 1097 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 CCNG1P51959 295 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 PPP2R2AP63151 447 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 SFSWAPQ12872 951 aaKnown RBP6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 TUBB2AQ13885 445 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 RCN2Q14257 317 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 SETDB1Q15047 1291 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 AOC3Q16853 763 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 C6orf183Q5T699 404 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 CDKAL1Q5VV42 579 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 C8orf74Q6P047 294 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 USP17L2Q6R6M4 530 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 CYP26C1Q6V0L0 522 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 RUFY4Q6ZNE9 571 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 STAG2Q8N3U4 1231 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 CCDC155Q8N6L0 562 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 KIAA1958Q8N8K9 716 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 FAM133AQ8N9E0 248 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 ZBTB8BQ8NAP8 495 aaPredicted RBP6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 SMYD1Q8NB12 490 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 ZNF784Q8NCA9 323 aaPredicted RBP6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 CCDC197Q8NCU1 140 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 KLHL29Q96CT2 875 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms