RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 MYCT1Q8N699 235 aa17.76■□□□□ 0.43
COL6A1-206ENST00000498614 SLC35C1Q96A29 364 aa17.76■□□□□ 0.43
COL6A1-206ENST00000498614 HSD17B14Q9BPX1 270 aa17.76■□□□□ 0.43
COL6A1-206ENST00000498614 DPH5Q9H2P9 285 aa17.76■□□□□ 0.43
COL6A1-206ENST00000498614 ARHGEF10LQ9HCE6 1279 aa17.76■□□□□ 0.43
COL6A1-206ENST00000498614 C5orf60A6NFR6 353 aa17.76■□□□□ 0.43
COL6A1-206ENST00000498614 CCDC188H7C350 402 aa17.76■□□□□ 0.43
COL6A1-206ENST00000498614 TGFB1I1O43294 461 aa17.76■□□□□ 0.43
COL6A1-206ENST00000498614 PAEPP09466 180 aa17.76■□□□□ 0.43
COL6A1-206ENST00000498614 RPL13P26373 211 aaKnown RBP17.76■□□□□ 0.43
COL6A1-206ENST00000498614 RASGEF1CQ8N431 466 aa17.76■□□□□ 0.43
COL6A1-206ENST00000498614 HAUS2Q9NVX0 235 aa17.76■□□□□ 0.43
COL6A1-206ENST00000498614 GCNT4Q9P109 453 aa17.76■□□□□ 0.43
COL6A1-206ENST00000498614 NENFQ9UMX5 172 aa17.76■□□□□ 0.43
COL6A1-206ENST00000498614 PHF20L1A8MW92 1017 aa17.75■□□□□ 0.43
COL6A1-206ENST00000498614 F8VZ95 297 aa17.75■□□□□ 0.43
COL6A1-206ENST00000498614 DHX9Q08211 1270 aaKnown RBP17.75■□□□□ 0.43
COL6A1-206ENST00000498614 DLGAP5Q15398 846 aa17.75■□□□□ 0.43
COL6A1-206ENST00000498614 KRT71Q3SY84 523 aa17.75■□□□□ 0.43
COL6A1-206ENST00000498614 SLFN11Q7Z7L1 901 aa17.75■□□□□ 0.43
COL6A1-206ENST00000498614 AGBL3Q8NEM8 1001 aa17.75■□□□□ 0.43
COL6A1-206ENST00000498614 SIX2Q9NPC8 291 aa17.75■□□□□ 0.43
COL6A1-206ENST00000498614 BZW2Q9Y6E2 419 aaKnown RBP17.75■□□□□ 0.43
COL6A1-206ENST00000498614 ZMYM2Q9UBW7 1377 aa17.75■□□□□ 0.43
COL6A1-206ENST00000498614 SPDYE2BA6NHP3 402 aa17.75■□□□□ 0.43
COL6A1-206ENST00000498614 SLC16A3O15427 465 aaKnown RBP17.75■□□□□ 0.43
COL6A1-206ENST00000498614 PSMD10O75832 226 aa17.75■□□□□ 0.43
COL6A1-206ENST00000498614 DDNO94850 711 aaPredicted RBP17.75■□□□□ 0.43
COL6A1-206ENST00000498614 POLR2MP0CAP2 368 aa17.75■□□□□ 0.43
COL6A1-206ENST00000498614 SPDYE6P0CI01 402 aa17.75■□□□□ 0.43
COL6A1-206ENST00000498614 RDXP35241 583 aaKnown RBP17.75■□□□□ 0.43
COL6A1-206ENST00000498614 CACNA2D3Q8IZS8 1091 aa17.75■□□□□ 0.43
COL6A1-206ENST00000498614 TATDN2Q93075 761 aa17.75■□□□□ 0.43
COL6A1-206ENST00000498614 SLITRK6Q9H5Y7 841 aa17.75■□□□□ 0.43
COL6A1-206ENST00000498614 METTL14Q9HCE5 456 aaKnown RBP17.75■□□□□ 0.43
COL6A1-206ENST00000498614 OLFML3Q9NRN5 406 aa17.75■□□□□ 0.43
COL6A1-206ENST00000498614 TMOD2Q9NZR1 351 aa17.75■□□□□ 0.43
COL6A1-206ENST00000498614 HERC5Q9UII4 1024 aaKnown RBP17.75■□□□□ 0.43
COL6A1-206ENST00000498614 PSME4Q14997 1843 aa17.75■□□□□ 0.43
COL6A1-206ENST00000498614 ATP2C2O75185 946 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 CCDC172P0C7W6 258 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 GAP43P17677 238 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 CDR1P51861 262 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 COG2Q14746 738 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 PREPLQ4J6C6 727 aaPredicted RBP17.74■□□□□ 0.43
COL6A1-206ENST00000498614 TBC1D10BQ4KMP7 808 aaPredicted RBP17.74■□□□□ 0.43
COL6A1-206ENST00000498614 C9orf131Q5VYM1 1079 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 CYB5D1Q6P9G0 228 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 C1orf186Q6ZWK4 172 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 NT5DC3Q86UY8 548 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 MICALL2Q8IY33 904 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 FUKQ8N0W3 1084 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 MDM1Q8TC05 714 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 TRIM51Q9BSJ1 452 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 TUFT1Q9NNX1 390 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 SUCLA2Q9P2R7 463 aaPredicted RBP17.74■□□□□ 0.43
COL6A1-206ENST00000498614 CNOT7Q9UIV1 285 aaKnown RBP17.74■□□□□ 0.43
COL6A1-206ENST00000498614 TMX2Q9Y320 296 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 GAS7O60861 476 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 FLOT1O75955 427 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 H2AFZP0C0S5 128 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 PRKCIP41743 596 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 H2AFVQ71UI9 128 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 DAAM2Q86T65 1068 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 SEC14L1Q92503 715 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 TRIM31Q9BZY9 425 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 VEZTQ9HBM0 779 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 GOPCQ9HD26 462 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 MYOZ2Q9NPC6 264 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 WRAP73Q9P2S5 460 aaPredicted RBP17.74■□□□□ 0.43
COL6A1-206ENST00000498614 NR2E1Q9Y466 385 aa17.74■□□□□ 0.43
COL6A1-206ENST00000498614 ASTN2O75129 1339 aaPredicted RBP17.73■□□□□ 0.43
COL6A1-206ENST00000498614 SBF1O95248 1867 aa17.73■□□□□ 0.43
COL6A1-206ENST00000498614 DDX3XO00571 662 aaKnown RBP eCLIP17.73■□□□□ 0.43
COL6A1-206ENST00000498614 WNT10BO00744 389 aa17.73■□□□□ 0.43
COL6A1-206ENST00000498614 DRD4P21917 467 aa17.73■□□□□ 0.43
COL6A1-206ENST00000498614 SCTRP47872 440 aa17.73■□□□□ 0.43
COL6A1-206ENST00000498614 FAM228AQ86W67 206 aa17.73■□□□□ 0.43
COL6A1-206ENST00000498614 CDAN1Q8IWY9 1227 aa17.73■□□□□ 0.43
COL6A1-206ENST00000498614 PARP9Q8IXQ6 854 aa17.73■□□□□ 0.43
COL6A1-206ENST00000498614 CCDC26Q8TAB7 109 aa17.73■□□□□ 0.43
COL6A1-206ENST00000498614 SLC5A5Q92911 643 aa17.73■□□□□ 0.43
COL6A1-206ENST00000498614 ZBTB21Q9ULJ3 1066 aa17.73■□□□□ 0.43
COL6A1-206ENST00000498614 RBBP6Q7Z6E9 1792 aaKnown RBP17.73■□□□□ 0.43
COL6A1-206ENST00000498614 POU5F1Q01860 360 aaKnown RBP17.73■□□□□ 0.43
COL6A1-206ENST00000498614 PPP2R5CQ13362 524 aa17.73■□□□□ 0.43
COL6A1-206ENST00000498614 CHADLQ6NUI6 762 aa17.73■□□□□ 0.43
COL6A1-206ENST00000498614 FAM186BQ8IYM0 893 aa17.73■□□□□ 0.43
COL6A1-206ENST00000498614 ATP8B4Q8TF62 1192 aa17.73■□□□□ 0.43
COL6A1-206ENST00000498614 U2AF1L4Q8WU68 220 aaKnown RBP17.73■□□□□ 0.43
COL6A1-206ENST00000498614 PARVGQ9HBI0 331 aa17.73■□□□□ 0.43
COL6A1-206ENST00000498614 MCM8Q9UJA3 840 aa17.73■□□□□ 0.43
COL6A1-206ENST00000498614 ATP8A1Q9Y2Q0 1164 aa17.73■□□□□ 0.43
COL6A1-206ENST00000498614 COL2A1P02458 1487 aaPredicted RBP17.72■□□□□ 0.43
COL6A1-206ENST00000498614 ARP10275 920 aa17.72■□□□□ 0.43
COL6A1-206ENST00000498614 IBSPP21815 317 aaPredicted RBP17.72■□□□□ 0.43
COL6A1-206ENST00000498614 JAM2P57087 298 aa17.72■□□□□ 0.43
COL6A1-206ENST00000498614 SNCBQ16143 134 aa17.72■□□□□ 0.43
COL6A1-206ENST00000498614 CPLX4Q7Z7G2 160 aa17.72■□□□□ 0.43
COL6A1-206ENST00000498614 LMBR1Q8WVP7 490 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms