RNA–Protein interactions for RNA: ENST00000498535.1

MKRN1-216, Transcript of makorin ring finger protein 1, humanhuman

TSL 2

Gene MKRN1, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1-216ENST00000498535 KSR1Q8IVT5 923 aa28.4■■■□□ 2.14
MKRN1-216ENST00000498535 VPS52Q8N1B4 723 aa28.4■■■□□ 2.14
MKRN1-216ENST00000498535 LPPQ93052 612 aa28.4■■■□□ 2.14
MKRN1-216ENST00000498535 FAM105AQ9NUU6 356 aa28.4■■■□□ 2.14
MKRN1-216ENST00000498535 INPP5FQ9Y2H2 1132 aa28.4■■■□□ 2.14
MKRN1-216ENST00000498535 NR2E1Q9Y466 385 aa28.4■■■□□ 2.14
MKRN1-216ENST00000498535 EML1O00423 815 aa28.39■■■□□ 2.14
MKRN1-216ENST00000498535 MARCH6O60337 910 aa28.39■■■□□ 2.14
MKRN1-216ENST00000498535 CLASP2O75122 1294 aaKnown RBP28.39■■■□□ 2.14
MKRN1-216ENST00000498535 GCFC2P16383 781 aaKnown RBP28.39■■■□□ 2.14
MKRN1-216ENST00000498535 ITIH3Q06033 890 aa28.39■■■□□ 2.14
MKRN1-216ENST00000498535 PTPN21Q16825 1174 aa28.39■■■□□ 2.14
MKRN1-216ENST00000498535 NOMO2Q5JPE7 1267 aa28.39■■■□□ 2.14
MKRN1-216ENST00000498535 PGBD4Q96DM1 585 aa28.39■■■□□ 2.14
MKRN1-216ENST00000498535 CEP170P1Q96L14 293 aa28.39■■■□□ 2.14
MKRN1-216ENST00000498535 NECTIN4Q96NY8 510 aa28.39■■■□□ 2.14
MKRN1-216ENST00000498535 PHF20Q9BVI0 1012 aa28.39■■■□□ 2.14
MKRN1-216ENST00000498535 TSHZ2Q9NRE2 1034 aa28.39■■■□□ 2.14
MKRN1-216ENST00000498535 ZNF623O75123 536 aa28.38■■■□□ 2.13
MKRN1-216ENST00000498535 P4HBP07237 508 aaKnown RBP28.38■■■□□ 2.13
MKRN1-216ENST00000498535 SP100P23497 879 aaPredicted RBP28.38■■■□□ 2.13
MKRN1-216ENST00000498535 PPP4R3AQ6IN85 833 aa28.38■■■□□ 2.13
MKRN1-216ENST00000498535 FBXL6Q8N531 539 aa28.38■■■□□ 2.13
MKRN1-216ENST00000498535 NAP1L4Q99733 375 aaKnown RBP28.38■■■□□ 2.13
MKRN1-216ENST00000498535 PRRX2Q99811 253 aa28.38■■■□□ 2.13
MKRN1-216ENST00000498535 ADAM7Q9H2U9 754 aa28.38■■■□□ 2.13
MKRN1-216ENST00000498535 VAV3Q9UKW4 847 aa28.38■■■□□ 2.13
MKRN1-216ENST00000498535 PPME1Q9Y570 386 aa28.38■■■□□ 2.13
MKRN1-216ENST00000498535 COL4A3BPQ9Y5P4 624 aa28.38■■■□□ 2.13
MKRN1-216ENST00000498535 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.37■■■□□ 2.13
MKRN1-216ENST00000498535 POLGP54098 1239 aaPredicted RBP28.37■■■□□ 2.13
MKRN1-216ENST00000498535 NPEPPSP55786 919 aa28.37■■■□□ 2.13
MKRN1-216ENST00000498535 GIT2Q14161 759 aa28.37■■■□□ 2.13
MKRN1-216ENST00000498535 DDX53Q86TM3 631 aaKnown RBP28.37■■■□□ 2.13
MKRN1-216ENST00000498535 KCNMB3Q9NPA1 279 aa28.37■■■□□ 2.13
MKRN1-216ENST00000498535 TBC1D13Q9NVG8 400 aa28.37■■■□□ 2.13
MKRN1-216ENST00000498535 CCNT1O60563 726 aaKnown RBP28.36■■■□□ 2.13
MKRN1-216ENST00000498535 RFC5P40937 340 aa28.36■■■□□ 2.13
MKRN1-216ENST00000498535 SCRN1Q12765 414 aa28.36■■■□□ 2.13
MKRN1-216ENST00000498535 PSPC1Q8WXF1 523 aaKnown RBP28.36■■■□□ 2.13
MKRN1-216ENST00000498535 IGSF21Q96ID5 467 aa28.36■■■□□ 2.13
MKRN1-216ENST00000498535 GBP3Q9H0R5 595 aa28.36■■■□□ 2.13
MKRN1-216ENST00000498535 ZBP1Q9H171 429 aa28.36■■■□□ 2.13
MKRN1-216ENST00000498535 NRDE2Q9H7Z3 1164 aa28.36■■■□□ 2.13
MKRN1-216ENST00000498535 IFT122Q9HBG6 1241 aa28.36■■■□□ 2.13
MKRN1-216ENST00000498535 TBX3O15119 743 aa28.35■■■□□ 2.13
MKRN1-216ENST00000498535 OFD1O75665 1012 aa28.35■■■□□ 2.13
MKRN1-216ENST00000498535 SRGAP2CP0DJJ0 459 aa28.35■■■□□ 2.13
MKRN1-216ENST00000498535 MTHFRP42898 656 aa28.35■■■□□ 2.13
MKRN1-216ENST00000498535 OTUD6AQ7L8S5 288 aa28.35■■■□□ 2.13
MKRN1-216ENST00000498535 URGCPQ8TCY9 931 aa28.35■■■□□ 2.13
MKRN1-216ENST00000498535 PRPF31Q8WWY3 499 aaKnown RBP28.35■■■□□ 2.13
MKRN1-216ENST00000498535 RIPOR3Q96MK2 946 aa28.35■■■□□ 2.13
MKRN1-216ENST00000498535 AGPAT5Q9NUQ2 364 aa28.35■■■□□ 2.13
MKRN1-216ENST00000498535 DZANK1Q9NVP4 752 aa28.35■■■□□ 2.13
MKRN1-216ENST00000498535 PCDHB2Q9Y5E7 798 aa28.35■■■□□ 2.13
MKRN1-216ENST00000498535 IRAK3Q9Y616 596 aa28.35■■■□□ 2.13
MKRN1-216ENST00000498535 MEIS3P2A8K0S8 358 aa28.34■■■□□ 2.13
MKRN1-216ENST00000498535 GALTP07902 379 aa28.34■■■□□ 2.13
MKRN1-216ENST00000498535 CTSAP10619 480 aa28.34■■■□□ 2.13
MKRN1-216ENST00000498535 PTPN5P54829 565 aa28.34■■■□□ 2.13
MKRN1-216ENST00000498535 PIK3AP1Q6ZUJ8 805 aa28.34■■■□□ 2.13
MKRN1-216ENST00000498535 SRGAP1Q7Z6B7 1085 aa28.34■■■□□ 2.13
MKRN1-216ENST00000498535 TMEM173Q86WV6 379 aaPredicted RBP28.34■■■□□ 2.13
MKRN1-216ENST00000498535 AUTS2Q8WXX7 1259 aa28.34■■■□□ 2.13
MKRN1-216ENST00000498535 TMEM143Q96AN5 459 aa28.34■■■□□ 2.13
MKRN1-216ENST00000498535 DHX33Q9H6R0 707 aaKnown RBP28.34■■■□□ 2.13
MKRN1-216ENST00000498535 STK36Q9NRP7 1315 aa28.34■■■□□ 2.13
MKRN1-216ENST00000498535 BAG4O95429 457 aaKnown RBP28.33■■■□□ 2.13
MKRN1-216ENST00000498535 EPHA7Q15375 998 aa28.33■■■□□ 2.13
MKRN1-216ENST00000498535 RARS2Q5T160 578 aaKnown RBP28.33■■■□□ 2.13
MKRN1-216ENST00000498535 IER5LQ5T953 404 aa28.33■■■□□ 2.13
MKRN1-216ENST00000498535 C4orf19Q8IY42 314 aa28.33■■■□□ 2.13
MKRN1-216ENST00000498535 ZNF579Q8NAF0 562 aaKnown RBP28.33■■■□□ 2.13
MKRN1-216ENST00000498535 TCP11Q8WWU5 503 aa28.33■■■□□ 2.13
MKRN1-216ENST00000498535 ASIC4Q96FT7 647 aa28.33■■■□□ 2.13
MKRN1-216ENST00000498535 LXNQ9BS40 222 aa28.33■■■□□ 2.13
MKRN1-216ENST00000498535 POMKQ9H5K3 350 aa28.33■■■□□ 2.13
MKRN1-216ENST00000498535 STK39Q9UEW8 545 aa28.33■■■□□ 2.13
MKRN1-216ENST00000498535 CDH22Q9UJ99 828 aa28.33■■■□□ 2.13
MKRN1-216ENST00000498535 GAS2O43903 313 aaKnown RBP28.32■■■□□ 2.12
MKRN1-216ENST00000498535 YWHABP31946 246 aaKnown RBP28.32■■■□□ 2.12
MKRN1-216ENST00000498535 LAMTOR4Q0VGL1 99 aa28.32■■■□□ 2.12
MKRN1-216ENST00000498535 NCAPH2Q6IBW4 605 aa28.32■■■□□ 2.12
MKRN1-216ENST00000498535 PRSS33Q8NF86 280 aa28.32■■■□□ 2.12
MKRN1-216ENST00000498535 WASF1Q92558 559 aa28.32■■■□□ 2.12
MKRN1-216ENST00000498535 HAS1Q92839 578 aa28.32■■■□□ 2.12
MKRN1-216ENST00000498535 FAM193BQ96PV7 902 aaPredicted RBP28.32■■■□□ 2.12
MKRN1-216ENST00000498535 WRAP73Q9P2S5 460 aaPredicted RBP28.32■■■□□ 2.12
MKRN1-216ENST00000498535 DNAJB4Q9UDY4 337 aa28.32■■■□□ 2.12
MKRN1-216ENST00000498535 ASAP2O43150 1006 aa28.31■■■□□ 2.12
MKRN1-216ENST00000498535 PFKFB2O60825 505 aa28.31■■■□□ 2.12
MKRN1-216ENST00000498535 SLC11A1P49279 550 aa28.31■■■□□ 2.12
MKRN1-216ENST00000498535 XKR9Q5GH70 373 aa28.31■■■□□ 2.12
MKRN1-216ENST00000498535 ATAT1Q5SQI0 421 aa28.31■■■□□ 2.12
MKRN1-216ENST00000498535 PPFIBP1Q86W92 1011 aa28.31■■■□□ 2.12
MKRN1-216ENST00000498535 SLFN12Q8IYM2 578 aa28.31■■■□□ 2.12
MKRN1-216ENST00000498535 OXER1Q8TDS5 423 aa28.31■■■□□ 2.12
MKRN1-216ENST00000498535 ZSWIM4Q9H7M6 989 aa28.31■■■□□ 2.12
MKRN1-216ENST00000498535 RSAD1Q9HA92 442 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms