RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 NFKBIZQ9BYH8 718 aa14.18□□□□□ -0.14
HSPG2-213ENST00000498495 TMEM117Q9H0C3 514 aa14.18□□□□□ -0.14
HSPG2-213ENST00000498495 POLD4Q9HCU8 107 aa14.18□□□□□ -0.14
HSPG2-213ENST00000498495 FAM105AQ9NUU6 356 aa14.18□□□□□ -0.14
HSPG2-213ENST00000498495 LMCD1Q9NZU5 365 aa14.18□□□□□ -0.14
HSPG2-213ENST00000498495 MTCH2Q9Y6C9 303 aa14.18□□□□□ -0.14
HSPG2-213ENST00000498495 MRPL42Q9Y6G3 142 aaKnown RBP14.18□□□□□ -0.14
HSPG2-213ENST00000498495 ARID2Q68CP9 1835 aa14.18□□□□□ -0.14
HSPG2-213ENST00000498495 MYO9BQ13459 2157 aa14.17□□□□□ -0.14
HSPG2-213ENST00000498495 ZNF623O75123 536 aa14.17□□□□□ -0.14
HSPG2-213ENST00000498495 SSBP05455 408 aaKnown RBP eCLIP14.17□□□□□ -0.14
HSPG2-213ENST00000498495 HOXA11P31270 313 aaPredicted RBP14.17□□□□□ -0.14
HSPG2-213ENST00000498495 RAB27AP51159 221 aa14.17□□□□□ -0.14
HSPG2-213ENST00000498495 GRIN1Q05586 938 aa14.17□□□□□ -0.14
HSPG2-213ENST00000498495 MBTD1Q05BQ5 628 aa14.17□□□□□ -0.14
HSPG2-213ENST00000498495 PPP2R5AQ15172 486 aa14.17□□□□□ -0.14
HSPG2-213ENST00000498495 FOXD4L5Q5VV16 416 aaPredicted RBP14.17□□□□□ -0.14
HSPG2-213ENST00000498495 RINT1Q6NUQ1 792 aa14.17□□□□□ -0.14
HSPG2-213ENST00000498495 KCNK18Q7Z418 384 aa14.17□□□□□ -0.14
HSPG2-213ENST00000498495 SLC17A8Q8NDX2 589 aa14.17□□□□□ -0.14
HSPG2-213ENST00000498495 RASSF8Q8NHQ8 419 aa14.17□□□□□ -0.14
HSPG2-213ENST00000498495 DEPTORQ8TB45 409 aa14.17□□□□□ -0.14
HSPG2-213ENST00000498495 FOXD4L4Q8WXT5 416 aaPredicted RBP14.17□□□□□ -0.14
HSPG2-213ENST00000498495 KIFAP3Q92845 792 aa14.17□□□□□ -0.14
HSPG2-213ENST00000498495 PGBD4Q96DM1 585 aa14.17□□□□□ -0.14
HSPG2-213ENST00000498495 ZNF396Q96N95 335 aaPredicted RBP14.17□□□□□ -0.14
HSPG2-213ENST00000498495 USP28Q96RU2 1077 aa14.17□□□□□ -0.14
HSPG2-213ENST00000498495 PLVAPQ9BX97 442 aa14.17□□□□□ -0.14
HSPG2-213ENST00000498495 C2orf40Q9H1Z8 148 aa14.17□□□□□ -0.14
HSPG2-213ENST00000498495 AAASQ9NRG9 546 aa14.17□□□□□ -0.14
HSPG2-213ENST00000498495 SRPRBQ9Y5M8 271 aaKnown RBP14.17□□□□□ -0.14
HSPG2-213ENST00000498495 C5orf67F2Z3F1 127 aa14.16□□□□□ -0.14
HSPG2-213ENST00000498495 TSPAN1O60635 241 aa14.16□□□□□ -0.14
HSPG2-213ENST00000498495 PLA2G4BP0C869 781 aa14.16□□□□□ -0.14
HSPG2-213ENST00000498495 ZSCAN22P10073 491 aaPredicted RBP14.16□□□□□ -0.14
HSPG2-213ENST00000498495 NAMPTP43490 491 aa14.16□□□□□ -0.14
HSPG2-213ENST00000498495 SLC39A14Q15043 492 aa14.16□□□□□ -0.14
HSPG2-213ENST00000498495 PTPROQ16827 1216 aa14.16□□□□□ -0.14
HSPG2-213ENST00000498495 LONRF3Q496Y0 759 aa14.16□□□□□ -0.14
HSPG2-213ENST00000498495 NOTUMQ6P988 496 aa14.16□□□□□ -0.14
HSPG2-213ENST00000498495 C1orf186Q6ZWK4 172 aa14.16□□□□□ -0.14
HSPG2-213ENST00000498495 ZNF598Q86UK7 904 aaKnown RBP14.16□□□□□ -0.14
HSPG2-213ENST00000498495 SYT2Q8N9I0 419 aaPredicted RBP14.16□□□□□ -0.14
HSPG2-213ENST00000498495 CNNM3Q8NE01 707 aa14.16□□□□□ -0.14
HSPG2-213ENST00000498495 CPB2Q96IY4 423 aa14.16□□□□□ -0.14
HSPG2-213ENST00000498495 CASD1Q96PB1 797 aa14.16□□□□□ -0.14
HSPG2-213ENST00000498495 C11orf84Q9BUA3 381 aaPredicted RBP14.16□□□□□ -0.14
HSPG2-213ENST00000498495 CSRNP2Q9H175 543 aa14.16□□□□□ -0.14
HSPG2-213ENST00000498495 TYW1Q9NV66 732 aaKnown RBP14.16□□□□□ -0.14
HSPG2-213ENST00000498495 PRMT7Q9NVM4 692 aaPredicted RBP14.16□□□□□ -0.14
HSPG2-213ENST00000498495 TFIP11Q9UBB9 837 aaKnown RBP14.16□□□□□ -0.14
HSPG2-213ENST00000498495 PCDHB2Q9Y5E7 798 aa14.16□□□□□ -0.14
HSPG2-213ENST00000498495 PCDHB12Q9Y5F1 795 aa14.16□□□□□ -0.14
HSPG2-213ENST00000498495 HIP1RO75146 1068 aa14.15□□□□□ -0.14
HSPG2-213ENST00000498495 LINC00271P0C7V0 271 aa14.15□□□□□ -0.14
HSPG2-213ENST00000498495 ARF4P18085 180 aaPredicted RBP14.15□□□□□ -0.14
HSPG2-213ENST00000498495 STK38Q15208 465 aa14.15□□□□□ -0.14
HSPG2-213ENST00000498495 TMEM119Q4V9L6 283 aa14.15□□□□□ -0.14
HSPG2-213ENST00000498495 NAALADL2Q58DX5 795 aa14.15□□□□□ -0.14
HSPG2-213ENST00000498495 SPECC1Q5M775 1068 aa14.15□□□□□ -0.14
HSPG2-213ENST00000498495 HELQQ8TDG4 1101 aa14.15□□□□□ -0.14
HSPG2-213ENST00000498495 BSNDQ8WZ55 320 aa14.15□□□□□ -0.14
HSPG2-213ENST00000498495 LPPQ93052 612 aa14.15□□□□□ -0.14
HSPG2-213ENST00000498495 P2RX5Q93086 422 aa14.15□□□□□ -0.14
HSPG2-213ENST00000498495 DRC1Q96MC2 740 aa14.15□□□□□ -0.14
HSPG2-213ENST00000498495 RUSC1Q9BVN2 902 aa14.15□□□□□ -0.14
HSPG2-213ENST00000498495 TIPINQ9BVW5 301 aa14.15□□□□□ -0.14
HSPG2-213ENST00000498495 CCSER1Q9C0I3 900 aa14.15□□□□□ -0.14
HSPG2-213ENST00000498495 RNF19AQ9NV58 838 aa14.15□□□□□ -0.14
HSPG2-213ENST00000498495 CCDC39Q9UFE4 941 aa14.15□□□□□ -0.14
HSPG2-213ENST00000498495 KCNG1Q9UIX4 513 aa14.15□□□□□ -0.14
HSPG2-213ENST00000498495 FBXO2Q9UK22 296 aaPredicted RBP14.15□□□□□ -0.14
HSPG2-213ENST00000498495 COL4A6Q14031 1691 aa14.14□□□□□ -0.15
HSPG2-213ENST00000498495 CCDC169A6NNP5 214 aa14.14□□□□□ -0.15
HSPG2-213ENST00000498495 SFI1A8K8P3 1242 aa14.14□□□□□ -0.15
HSPG2-213ENST00000498495 F13A1P00488 732 aa14.14□□□□□ -0.15
HSPG2-213ENST00000498495 ATF7P17544 494 aaPredicted RBP14.14□□□□□ -0.15
HSPG2-213ENST00000498495 LIG1P18858 919 aa14.14□□□□□ -0.15
HSPG2-213ENST00000498495 SLC12A3P55017 1021 aa14.14□□□□□ -0.15
HSPG2-213ENST00000498495 PEX3P56589 373 aa14.14□□□□□ -0.15
HSPG2-213ENST00000498495 BECN1Q14457 450 aa14.14□□□□□ -0.15
HSPG2-213ENST00000498495 DHX8Q14562 1220 aaKnown RBP14.14□□□□□ -0.15
HSPG2-213ENST00000498495 KARSQ15046 597 aaKnown RBP14.14□□□□□ -0.15
HSPG2-213ENST00000498495 SKIV2LQ15477 1246 aaKnown RBP14.14□□□□□ -0.15
HSPG2-213ENST00000498495 MAPK6Q16659 721 aa14.14□□□□□ -0.15
HSPG2-213ENST00000498495 AMHR2Q16671 573 aa14.14□□□□□ -0.15
HSPG2-213ENST00000498495 TMEM132AQ24JP5 1023 aa14.14□□□□□ -0.15
HSPG2-213ENST00000498495 FOXD4L6Q3SYB3 417 aaPredicted RBP14.14□□□□□ -0.15
HSPG2-213ENST00000498495 CLLU1OSQ5K130 101 aa14.14□□□□□ -0.15
HSPG2-213ENST00000498495 UBXN11Q5T124 520 aa14.14□□□□□ -0.15
HSPG2-213ENST00000498495 CDCA2Q69YH5 1023 aaPredicted RBP14.14□□□□□ -0.15
HSPG2-213ENST00000498495 GLB1LQ6UWU2 654 aa14.14□□□□□ -0.15
HSPG2-213ENST00000498495 FOXD4L3Q6VB84 417 aaPredicted RBP14.14□□□□□ -0.15
HSPG2-213ENST00000498495 LRRC55Q6ZSA7 311 aa14.14□□□□□ -0.15
HSPG2-213ENST00000498495 MRPL10Q7Z7H8 261 aaKnown RBP14.14□□□□□ -0.15
HSPG2-213ENST00000498495 KLHL23Q8NBE8 558 aa14.14□□□□□ -0.15
HSPG2-213ENST00000498495 MRPL38Q96DV4 380 aaKnown RBP14.14□□□□□ -0.15
HSPG2-213ENST00000498495 CCDC51Q96ER9 411 aa14.14□□□□□ -0.15
HSPG2-213ENST00000498495 EPSTI1Q96J88 318 aa14.14□□□□□ -0.15
HSPG2-213ENST00000498495 PRIMPOLQ96LW4 560 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms